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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 5
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G010880.1
HORVU0Hr1G031710.1 endoplasmic reticulum
HORVU1Hr1G007830.4
HORVU1Hr1G045610.5
HORVU1Hr1G045630.3
HORVU1Hr1G047990.4
HORVU1Hr1G052620.1
HORVU1Hr1G068030.1 endoplasmic reticulum
HORVU1Hr1G082010.3
HORVU2Hr1G091830.4
HORVU3Hr1G030760.2
HORVU3Hr1G033870.1
HORVU3Hr1G069970.2
HORVU3Hr1G078660.1 endoplasmic reticulum
HORVU3Hr1G080830.1 endoplasmic reticulum
HORVU4Hr1G039810.2
HORVU4Hr1G080780.1
HORVU5Hr1G042290.8
HORVU5Hr1G053320.2
HORVU5Hr1G073350.1
HORVU5Hr1G084010.1
HORVU5Hr1G084020.3
HORVU6Hr1G060500.1
HORVU6Hr1G060760.3
HORVU7Hr1G007900.1
HORVU7Hr1G019380.2
HORVU7Hr1G028290.6
HORVU7Hr1G071270.2
HORVU7Hr1G075700.2
HORVU7Hr1G081290.4
HORVU7Hr1G084230.1
HORVU7Hr1G096560.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40890.1 HORVU1Hr1G052620.1 AT1G20330.1 23175744
AT2G40890.1 HORVU4Hr1G080780.1 AT1G20330.1 23175744
AT2G40890.1 HORVU5Hr1G053320.2 AT1G51570.1 23175744
AT2G40890.1 HORVU5Hr1G073350.1 AT1G51570.1 23175744
AT2G40890.1 HORVU1Hr1G082010.3 AT1G64090.2 23175744
AT2G40890.1 HORVU3Hr1G030760.2 AT1G64090.2 23175744
AT2G40890.1 HORVU3Hr1G069970.2 AT1G64090.2 23175744
AT2G40890.1 HORVU7Hr1G075700.2 AT1G64090.2 23175744
AT2G40890.1 HORVU7Hr1G081290.4 AT1G64090.2 23175744
AT2G40890.1 HORVU4Hr1G039810.2 AT2G03510.1 23175744
AT2G40890.1 HORVU5Hr1G084010.1 AT2G20990.3 23175744
AT2G40890.1 HORVU5Hr1G084020.3 AT2G20990.3 23175744
AT2G40890.1 HORVU3Hr1G080830.1 AT2G30490.1 23175744
AT2G40890.1 HORVU3Hr1G080830.1 AT2G30490.1 23175744
AT2G40890.1 HORVU0Hr1G031710.1 AT2G40890.1 23175744
AT2G40890.1 HORVU1Hr1G068030.1 AT2G40890.1 23175744
AT2G40890.1 HORVU3Hr1G078660.1 AT2G40890.1 23175744
AT2G40890.1 HORVU2Hr1G091830.4 AT2G45140.1 23175744
AT2G40890.1 HORVU6Hr1G060760.3 AT2G45140.1 23175744
AT2G40890.1 HORVU7Hr1G071270.2 AT2G45140.1 23175744
AT2G40890.1 HORVU1Hr1G082010.3 AT2G46170.1 23175744
AT2G40890.1 HORVU3Hr1G030760.2 AT2G46170.1 23175744
AT2G40890.1 HORVU3Hr1G069970.2 AT2G46170.1 23175744
AT2G40890.1 HORVU7Hr1G075700.2 AT2G46170.1 23175744
AT2G40890.1 HORVU7Hr1G081290.4 AT2G46170.1 23175744
AT2G40890.1 HORVU0Hr1G010880.1 AT3G26830.1 23175744
AT2G40890.1 HORVU1Hr1G007830.4 AT3G26830.1 23175744
AT2G40890.1 HORVU3Hr1G033870.1 AT3G26830.1 23175744
AT2G40890.1 HORVU7Hr1G007900.1 AT3G26830.1 23175744
AT2G40890.1 HORVU7Hr1G019380.2 AT3G26830.1 23175744
AT2G40890.1 HORVU7Hr1G028290.6 AT3G26830.1 23175744
AT2G40890.1 HORVU7Hr1G084230.1 AT3G26830.1 23175744
AT2G40890.1 HORVU7Hr1G096560.2 AT3G26830.1 23175744
AT2G40890.1 HORVU1Hr1G045610.5 AT3G48890.1 23175744
AT2G40890.1 HORVU5Hr1G042290.8 AT5G22460.1 23175744
AT2G40890.1 HORVU1Hr1G082010.3 AT5G41600.1 23175744
AT2G40890.1 HORVU3Hr1G030760.2 AT5G41600.1 23175744
AT2G40890.1 HORVU3Hr1G069970.2 AT5G41600.1 23175744
AT2G40890.1 HORVU7Hr1G075700.2 AT5G41600.1 23175744
AT2G40890.1 HORVU7Hr1G081290.4 AT5G41600.1 23175744
AT2G40890.1 HORVU1Hr1G045630.3 AT5G52240.1 23175744
AT2G40890.1 HORVU6Hr1G060500.1 AT5G52240.1 23175744
AT2G40890.1 HORVU1Hr1G047990.4 AT5G53560.1 23175744
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 99.81 99.81
TraesCS1B01G321800.1 Wheat endoplasmic reticulum 96.3 96.68
TraesCS1A01G310500.1 Wheat golgi 96.3 96.68
TraesCS1D01G310000.1 Wheat endoplasmic reticulum 96.11 96.48
EES18431 Sorghum endoplasmic reticulum 88.91 89.26
Zm00001d038555_P001 Maize plasma membrane 88.52 88.87
Os05t0494000-01 Rice plasma membrane 88.33 88.67
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 77.43 78.19
PGSC0003DMT400008504 Potato cytosol 30.35 75.0
GSMUA_Achr8P24010_001 Banana endoplasmic reticulum, extracellular 66.54 71.25
KRH66683 Soybean extracellular, golgi 69.46 70.14
KRG95042 Soybean mitochondrion 68.68 69.35
PGSC0003DMT400018493 Potato endoplasmic reticulum, extracellular 68.48 69.29
Solyc10g078240.1.1 Tomato endoplasmic reticulum, extracellular 68.48 69.16
VIT_08s0040g00780.t01 Wine grape extracellular, golgi 68.09 68.9
Solyc01g096670.2.1 Tomato endoplasmic reticulum, extracellular 68.87 68.87
CDY35432 Canola endoplasmic reticulum, extracellular, vacuole 67.9 68.7
CDY06955 Canola endoplasmic reticulum 67.7 68.5
Bra000211.1-P Field mustard endoplasmic reticulum, extracellular 67.51 68.31
AT2G40890.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 67.51 68.31
CDY14751 Canola endoplasmic reticulum 67.51 68.31
Bra016964.1-P Field mustard endoplasmic reticulum 64.4 67.14
CDY22488 Canola cytosol, mitochondrion 45.53 66.1
CDX79965 Canola endoplasmic reticulum, extracellular, vacuole 65.18 66.08
Bra004591.1-P Field mustard endoplasmic reticulum, extracellular 64.79 65.68
CDY23876 Canola endoplasmic reticulum, extracellular 64.4 65.29
PGSC0003DMT400038205 Potato extracellular, golgi 60.12 60.95
PGSC0003DMT400038202 Potato extracellular, golgi 59.92 60.75
Solyc01g009370.1.1 Tomato extracellular, golgi 59.73 60.55
PGSC0003DMT400075164 Potato cytosol 53.11 60.53
PGSC0003DMT400018494 Potato endoplasmic reticulum, extracellular 59.14 59.73
Solyc10g078220.1.1 Tomato endoplasmic reticulum 58.75 59.68
Solyc10g078230.1.1 Tomato endoplasmic reticulum, extracellular 58.37 58.94
PGSC0003DMT400018497 Potato endoplasmic reticulum, golgi 50.58 58.43
GSMUA_Achr4P10110_001 Banana endoplasmic reticulum, golgi 41.44 55.61
PGSC0003DMT400018498 Potato endoplasmic reticulum, golgi 30.93 51.29
HORVU5Hr1G061340.1 Barley endoplasmic reticulum 36.19 35.09
HORVU6Hr1G002400.2 Barley golgi, peroxisome 36.19 34.83
HORVU1Hr1G094880.5 Barley endoplasmic reticulum, plasma membrane 36.19 34.57
HORVU5Hr1G061930.2 Barley endoplasmic reticulum 34.82 33.77
HORVU5Hr1G017360.1 Barley endoplasmic reticulum 34.63 33.4
HORVU7Hr1G042260.3 Barley endoplasmic reticulum 36.58 32.98
HORVU4Hr1G063780.1 Barley endoplasmic reticulum 32.1 32.54
HORVU7Hr1G007580.1 Barley endoplasmic reticulum, plasma membrane 32.49 32.24
HORVU2Hr1G100050.1 Barley mitochondrion 28.79 31.36
HORVU6Hr1G087250.1 Barley endoplasmic reticulum 32.1 31.07
HORVU5Hr1G061950.2 Barley plastid 31.13 27.12
HORVU2Hr1G125520.1 Barley extracellular, golgi 16.34 26.42
HORVU2Hr1G119210.4 Barley endoplasmic reticulum, golgi 18.09 25.91
Protein Annotations
Gene3D:1.10.630.10MapMan:21.6.1.2UniProt:A0A287EAH5InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114EnsemblPlantsGene:HORVU0Hr1G031710EnsemblPlants:HORVU0Hr1G031710.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF0SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI000B478AC5SEG:seg::::
Description
No Description!
Coordinates
chrchrUn:-:188396893..188401846
Molecular Weight (calculated)
58433.1 Da
IEP (calculated)
8.223
GRAVY (calculated)
-0.225
Length
514 amino acids
Sequence
(BLAST)
001: MDMDMASLLP FVLALVAIPI SLALLDRLRL GRLPPGPRPW PVVGNLRQIK PVRCRCFQEW AERYGPILSV WFGSSLTVVV STSELAKEVL KEHDQQLADR
101: PRNRSTQRFS RNGQDLIWAD YGPHYIKVRK LCNLELFTQK RLEALRPIRE DEVTAMVESV HRAAAGPDNE GKPLVVRNHL AMVSFNNITR LAFGKRFMNA
201: NGDIDEEGQE FKLIVNNGIK IGASLSVAEY IWYLRWLCPL NEELYKTHNE RRDRLTKKII EEHAQALKES GAKQHFVDAL FTLREKYDLS DDTVFGLLWD
301: MITAGMDTTV ISVEWAMAEL VRNPRVQQKL QEELDNVVGR DRVMAETDFQ NLPYLMAVVK ESLRLHPPTP LMLPHKASAS VKVGGYNIPK GANVMVNVWA
401: VARDPKVWSS PLEFRPERFL EESIDIKGSD FRVLPFGAGR RVCPGAQLGI NLVASMIGHM LHHFKWSLPE GTRPEDISMM ESPGLVTFMG TPLQAIATPR
501: LEKEELYKRV PVEI
Best Arabidopsis Sequence Match ( AT2G40890.1 )
(BLAST)
001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
Arabidopsis Description
CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.