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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:mitochondrion
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g009370.1.1 endoplasmic reticulum
Solyc01g095200.2.1
Solyc01g111520.2.1
Solyc01g111830.2.1
Solyc02g044030.1.1
Solyc03g025950.2.1
Solyc03g082600.2.1
Solyc05g008680.1.1
Solyc05g012340.2.1
Solyc08g081730.2.1
Solyc10g011870.2.1
Solyc10g055680.1.1
Solyc10g078220.1.1 endoplasmic reticulum
Solyc10g078230.1.1 endoplasmic reticulum
Solyc10g078240.1.1 endoplasmic reticulum
Solyc10g078680.1.1
Solyc10g080420.1.1
Solyc10g080430.1.1
Solyc11g067260.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40890.1 Solyc01g111830.2.1 AT1G20330.1 23175744
AT2G40890.1 Solyc05g008680.1.1 AT1G20330.1 23175744
AT2G40890.1 Solyc10g055680.1.1 AT1G20330.1 23175744
AT2G40890.1 Solyc02g044030.1.1 AT1G51570.1 23175744
AT2G40890.1 Solyc10g078680.1.1 AT1G51570.1 23175744
AT2G40890.1 Solyc10g080420.1.1 AT1G51570.1 23175744
AT2G40890.1 Solyc10g080430.1.1 AT1G51570.1 23175744
AT2G40890.1 Solyc08g081730.2.1 AT1G64090.2 23175744
AT2G40890.1 Solyc05g012340.2.1 AT2G03510.1 23175744
AT2G40890.1 Solyc01g111520.2.1 AT2G20990.3 23175744
AT2G40890.1 Solyc01g009370.1.1 AT2G40890.1 23175744
AT2G40890.1 Solyc10g078220.1.1 AT2G40890.1 23175744
AT2G40890.1 Solyc10g078230.1.1 AT2G40890.1 23175744
AT2G40890.1 Solyc10g078240.1.1 AT2G40890.1 23175744
AT2G40890.1 Solyc01g095200.2.1 AT2G46170.1 23175744
AT2G40890.1 Solyc10g011870.2.1 AT2G46170.1 23175744
AT2G40890.1 Solyc03g025950.2.1 AT3G48890.1 23175744
AT2G40890.1 Solyc11g067260.1.1 AT5G22460.1 23175744
AT2G40890.1 Solyc08g081730.2.1 AT5G41600.1 23175744
AT2G40890.1 Solyc03g082600.2.1 AT5G53560.1 23175744
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400018497 Potato endoplasmic reticulum, golgi 83.0 94.38
PGSC0003DMT400018498 Potato endoplasmic reticulum, golgi 56.92 92.9
Solyc10g078230.1.1 Tomato endoplasmic reticulum, extracellular 88.93 88.41
Solyc01g009370.1.1 Tomato extracellular, golgi 74.9 74.75
Solyc10g078240.1.1 Tomato endoplasmic reticulum, extracellular 70.55 70.14
AT2G40890.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 63.04 62.8
CDY35432 Canola endoplasmic reticulum, extracellular, vacuole 62.65 62.4
Bra000211.1-P Field mustard endoplasmic reticulum, extracellular 62.45 62.2
CDY06955 Canola endoplasmic reticulum 62.45 62.2
CDY22488 Canola cytosol, mitochondrion 43.48 62.15
CDY14751 Canola endoplasmic reticulum 62.25 62.01
Bra004591.1-P Field mustard endoplasmic reticulum, extracellular 61.26 61.14
CDY23876 Canola endoplasmic reticulum, extracellular 61.26 61.14
GSMUA_Achr8P24010_001 Banana endoplasmic reticulum, extracellular 57.91 61.04
CDX79965 Canola endoplasmic reticulum, extracellular, vacuole 61.07 60.95
Solyc01g096670.2.1 Tomato endoplasmic reticulum, extracellular 61.86 60.89
Bra016964.1-P Field mustard endoplasmic reticulum 59.09 60.65
Os10t0196100-00 Rice mitochondrion 28.66 60.42
Zm00001d038555_P001 Maize plasma membrane 60.87 60.16
EES18431 Sorghum endoplasmic reticulum 60.67 59.96
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 59.88 59.53
TraesCS3B01G361900.1 Wheat endoplasmic reticulum 59.88 59.53
TraesCS5A01G554000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.49 59.02
TraesCS1A01G310500.1 Wheat golgi 59.68 58.98
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 59.88 58.95
TraesCS3A01G331800.1 Wheat endoplasmic reticulum 59.29 58.94
TraesCS1B01G321800.1 Wheat endoplasmic reticulum 59.49 58.79
HORVU0Hr1G031710.1 Barley endoplasmic reticulum 59.68 58.75
TraesCS3D01G325300.1 Wheat endoplasmic reticulum 59.09 58.74
TraesCS1D01G310000.1 Wheat endoplasmic reticulum 59.29 58.59
Os05t0494000-01 Rice plasma membrane 58.89 58.2
Zm00001d043174_P001 Maize mitochondrion 58.5 57.7
EES03767 Sorghum endoplasmic reticulum, extracellular 57.51 56.73
TraesCS4B01G393700.1 Wheat extracellular, golgi 52.17 55.7
TraesCSU01G032400.1 Wheat endoplasmic reticulum 28.26 52.96
TraesCSU01G032500.1 Wheat cytosol, plasma membrane, plastid 55.34 52.04
GSMUA_Achr4P10110_001 Banana endoplasmic reticulum, golgi 35.18 46.48
Solyc03g115220.2.1 Tomato extracellular, golgi 37.75 37.16
Solyc03g122360.2.1 Tomato endoplasmic reticulum, golgi 36.96 36.96
Solyc11g030730.1.1 Tomato endoplasmic reticulum, golgi 34.98 35.33
Solyc04g071820.2.1 Tomato endoplasmic reticulum, golgi 35.18 35.32
Solyc03g122350.2.1 Tomato endoplasmic reticulum 35.38 35.24
Solyc04g071790.1.1 Tomato golgi 34.98 34.71
Solyc04g071780.2.1 Tomato endoplasmic reticulum, golgi 34.19 34.19
Solyc04g071800.2.1 Tomato endoplasmic reticulum, golgi 33.99 33.79
Solyc11g066580.1.1 Tomato endoplasmic reticulum, golgi 33.99 33.66
Solyc04g054260.2.1 Tomato endoplasmic reticulum, extracellular 33.2 33.6
Solyc04g054250.2.1 Tomato endoplasmic reticulum, extracellular 32.61 33.54
Solyc04g011690.2.1 Tomato endoplasmic reticulum, golgi 32.02 32.34
Solyc04g054220.2.1 Tomato extracellular, golgi 31.42 32.19
Solyc04g011680.1.1 Tomato endoplasmic reticulum, extracellular 31.62 32.06
Solyc04g083150.1.1 Tomato nucleus 31.62 31.87
Solyc10g009390.2.1 Tomato endoplasmic reticulum, extracellular 34.98 31.83
Solyc04g050620.2.1 Tomato endoplasmic reticulum 31.03 31.78
Solyc12g045020.1.1 Tomato endoplasmic reticulum 30.63 31.44
Solyc12g042480.1.1 Tomato nucleus 30.24 30.85
Protein Annotations
Gene3D:1.10.630.10MapMan:21.6.1.2ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009809GO:GO:0009987
GO:GO:0016020GO:GO:0016491GO:GO:0016705GO:GO:0016709GO:GO:0019748GO:GO:0020037
GO:GO:0046872GO:GO:0055114InterPro:IPR036396UniProt:K4D264PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF0SUPFAM:SSF48264SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc10g078220.1EnsemblPlants:Solyc10g078220.1.1UniParc:UPI000276A0B2SEG:seg::
Description
No Description!
Coordinates
chr10:-:60074003..60076372
Molecular Weight (calculated)
58086.4 Da
IEP (calculated)
7.078
GRAVY (calculated)
-0.227
Length
506 amino acids
Sequence
(BLAST)
001: MAFPLVLSLS IFIIFLCYKL HNRLTAKLPP GPWPWPIIGN LFSIAPMRFR CFAEWAQIYG PIFSFYLGSQ LNVVVNNAEL AKEVLKENDQ NLANRFRTKP
101: LDSVSKNGMD LIWADYGPHY VKVRKLCNLE LFTQKRLEAL RPIREVEVTA MIENIFKDTT KPGDDSKTMT LRGYLGLVSF NNITRLTFGK RFINSKGEVD
201: EQGEELKSIV TDGIRISGKP NLGEFVPWLR WVFKDDNEAL ESQDRRLNKF TRLIMEEHTI AREKSGETKH HFVDALLTLQ KEYDLSDDSI ISLFWDMVQA
301: GTDTIAITVE WAMAELVRNP RVQQKVQEEL DRVIGSDRII DETDISNLSY LQHVVKESLR LHPPTPLMLP HMASNNVKVG GYNIPKGSIV HVNVWALGRD
401: PNIWREPLQF RPERFVEEDV DMKGHDYKLL PFGAGRRICP GMNLAINLVT SMLAHLLHHF VWSLPNGVKV EDIDMMESPG TVTYMQTPLH VVPTPRLPRN
501: LYTHVE
Best Arabidopsis Sequence Match ( AT2G40890.1 )
(BLAST)
001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
Arabidopsis Description
CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.