Factsheet for Solyc04g054250.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033311	Potato	endoplasmic reticulum, extracellular	93.9	93.52
PGSC0003DMT400065985	Potato	extracellular, golgi	54.47	88.45
Solyc04g050620.2.1	Tomato	endoplasmic reticulum	85.98	85.63
Solyc12g042480.1.1	Tomato	nucleus	74.8	74.19
Solyc04g054260.2.1	Tomato	endoplasmic reticulum, extracellular	72.56	71.4
Solyc12g045020.1.1	Tomato	endoplasmic reticulum	71.14	70.99
Solyc04g011680.1.1	Tomato	endoplasmic reticulum, extracellular	61.79	60.92
Solyc04g011690.2.1	Tomato	endoplasmic reticulum, golgi	61.79	60.68
VIT_07s0031g01390.t01	Wine grape	endoplasmic reticulum, extracellular	60.98	60.24
Solyc04g054220.2.1	Tomato	extracellular, golgi	59.96	59.72
VIT_07s0031g01380.t01	Wine grape	mitochondrion	56.91	58.95
VIT_07s0031g01370.t01	Wine grape	plastid	43.5	56.91
KRH43296	Soybean	endoplasmic reticulum, mitochondrion	56.91	56.8
KRH59431	Soybean	endoplasmic reticulum, mitochondrion	55.89	55.33
KRH43299	Soybean	endoplasmic reticulum, extracellular	54.47	53.82
KRH43298	Soybean	endoplasmic reticulum, golgi	54.67	53.8
Solyc04g083150.1.1	Tomato	nucleus	45.94	45.02
Solyc03g122360.2.1	Tomato	endoplasmic reticulum, golgi	36.99	35.97
Solyc03g122350.2.1	Tomato	endoplasmic reticulum	36.99	35.83
Solyc03g115220.2.1	Tomato	extracellular, golgi	36.99	35.41
Solyc04g071780.2.1	Tomato	endoplasmic reticulum, golgi	34.76	33.79
Solyc10g078230.1.1	Tomato	endoplasmic reticulum, extracellular	34.76	33.6
Solyc04g071820.2.1	Tomato	endoplasmic reticulum, golgi	34.35	33.53
Solyc11g066580.1.1	Tomato	endoplasmic reticulum, golgi	34.55	33.27
Solyc04g071800.2.1	Tomato	endoplasmic reticulum, golgi	34.35	33.2
Solyc11g030730.1.1	Tomato	endoplasmic reticulum, golgi	33.74	33.13
Solyc10g078220.1.1	Tomato	endoplasmic reticulum	33.54	32.61
Solyc04g071790.1.1	Tomato	golgi	33.33	32.16
Solyc10g009390.2.1	Tomato	endoplasmic reticulum, extracellular	35.57	31.47
Solyc01g009370.1.1	Tomato	extracellular, golgi	32.11	31.16
Solyc10g078240.1.1	Tomato	endoplasmic reticulum, extracellular	31.5	30.45
Solyc01g096670.2.1	Tomato	endoplasmic reticulum, extracellular	30.89	29.57

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016491
GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:K4BSI0	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF157	SUPFAM:SSF48264	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc04g054250.2
EnsemblPlants:Solyc04g054250.2.1	TMHMM:TMhelix	UniParc:UPI000276561E	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:52137032..52138685

Molecular Weight (calculated)

56318.1 Da

IEP (calculated)

8.022

GRAVY (calculated)

-0.130

Length

492 amino acids

Sequence
(BLAST)

001: MTLIWTVLVV ALFVYQLLSI HKRKKFPPGP KGLPILGHLH LLGKNPHQDL QKLANKHGPI MYMRLGLVPT FVASSADAAE KVLKTYDHVF ASRPHHEASQ
101: YLSYGQKNLI FAKYGVYWRN MRKLCTVHLL SNNKINSFQS MRKQQVQLLI ESLKKEAHDR VAVDLSAKIT SLNANLTCLM VFGKKYMDED LDKRGFKSIV
201: QDVVHLAATP NLGDFFPFLG AIDLQGLTRK LKDLSEVFDE FLEKIIDEHV HSHEHKQTKD FVDTMMGIMQ SGVAEFQLDR RHIKAILFDM LIAAMDTTAS
301: STEWILTELL RHPQVMKKLQ KELQEVVGLE RTVEESDLEN LKYLDMVVKE GLRLHPVVPL FYHESMEDCV VDGFHIKKGS RVMVNCYAAQ RDPNVWPEPE
401: MFLPERFVGS CIDFRGRDFQ LVPFGSGRRS CPGMQLAVIV VRLVVAQLVH CFEWELPNGM QPCDLDIDEK FGMVTCREKP LMAIPTYNLN KS

Best Arabidopsis Sequence Match ( AT3G48280.1 )
(BLAST)

001: MMMMIILLWS IIFMTILFLK KQLSGKKGKT PPSPPGLPLI GNLHQLGRHT HRSLCDLSRR YGPLMLLHLG RVPVLIVSSA DMAQEILKTH DQAFANRPRS
101: KLSQKLLYNN RDVASAPYGE YWRQMKSVCV IHLLSNKMVR SFRDVREEEI TLMMAKIRKS SSLPFNVSKV LECLTNDVIC RVALGRKYGG ETDFKKLTDR
201: LSELLGTFSI GSFVPWLAWV DWIRGWDAQL DKMGKDLDDF FEKVVQDHED GDRRDGTDLI DALLRVKREK SPGFEIERVS IKAITLDVFV GGSDTSFTLL
301: EWAMTELLRH PKSLNRLQEE VRTICKGKSR VSEDDIQGMK YLKAVIKEAL RLHPPFPMMA PHESTEDVKL RDYHIPAGTQ VMMNAWAIGR EVATWGPDAE
401: EFKPERHLDT SVDFRGQNFE LLPFGAGRRI CPAVSFAVVL NEVVLANLVH GFDWKLPEES KEDKTDVAES SGFSVHREFP LYAVASPYLT

Arabidopsis Description

CYP71A25Cytochrome P450 71A25 [Source:UniProtKB/Swiss-Prot;Acc:Q9STK8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.