Factsheet for Solyc10g078240.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g009370.1.1	endoplasmic reticulum
Solyc01g095200.2.1
Solyc01g111520.2.1
Solyc01g111830.2.1
Solyc02g044030.1.1
Solyc03g025950.2.1
Solyc03g082600.2.1
Solyc05g008680.1.1
Solyc05g012340.2.1
Solyc08g081730.2.1
Solyc10g011870.2.1
Solyc10g055680.1.1
Solyc10g078220.1.1	endoplasmic reticulum
Solyc10g078230.1.1	endoplasmic reticulum
Solyc10g078240.1.1	endoplasmic reticulum
Solyc10g078680.1.1
Solyc10g080420.1.1
Solyc10g080430.1.1
Solyc11g067260.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40890.1	Solyc01g111830.2.1	AT1G20330.1	23175744
AT2G40890.1	Solyc05g008680.1.1	AT1G20330.1	23175744
AT2G40890.1	Solyc10g055680.1.1	AT1G20330.1	23175744
AT2G40890.1	Solyc02g044030.1.1	AT1G51570.1	23175744
AT2G40890.1	Solyc10g078680.1.1	AT1G51570.1	23175744
AT2G40890.1	Solyc10g080420.1.1	AT1G51570.1	23175744
AT2G40890.1	Solyc10g080430.1.1	AT1G51570.1	23175744
AT2G40890.1	Solyc08g081730.2.1	AT1G64090.2	23175744
AT2G40890.1	Solyc05g012340.2.1	AT2G03510.1	23175744
AT2G40890.1	Solyc01g111520.2.1	AT2G20990.3	23175744
AT2G40890.1	Solyc01g009370.1.1	AT2G40890.1	23175744
AT2G40890.1	Solyc10g078220.1.1	AT2G40890.1	23175744
AT2G40890.1	Solyc10g078230.1.1	AT2G40890.1	23175744
AT2G40890.1	Solyc10g078240.1.1	AT2G40890.1	23175744
AT2G40890.1	Solyc01g095200.2.1	AT2G46170.1	23175744
AT2G40890.1	Solyc10g011870.2.1	AT2G46170.1	23175744
AT2G40890.1	Solyc03g025950.2.1	AT3G48890.1	23175744
AT2G40890.1	Solyc11g067260.1.1	AT5G22460.1	23175744
AT2G40890.1	Solyc08g081730.2.1	AT5G41600.1	23175744
AT2G40890.1	Solyc03g082600.2.1	AT5G53560.1	23175744

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018493	Potato	endoplasmic reticulum, extracellular	98.23	98.43
CDY35432	Canola	endoplasmic reticulum, extracellular, vacuole	73.48	73.62
Bra000211.1-P	Field mustard	endoplasmic reticulum, extracellular	73.08	73.23
AT2G40890.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	73.08	73.23
Solyc01g096670.2.1	Tomato	endoplasmic reticulum, extracellular	73.87	73.15
Solyc01g009370.1.1	Tomato	extracellular, golgi	72.5	72.78
CDY06955	Canola	endoplasmic reticulum	72.5	72.64
Solyc10g078230.1.1	Tomato	endoplasmic reticulum, extracellular	72.5	72.5
CDY14751	Canola	endoplasmic reticulum	72.3	72.44
CDY22488	Canola	cytosol, mitochondrion	50.29	72.32
Bra016964.1-P	Field mustard	endoplasmic reticulum	69.55	71.81
GSMUA_Achr8P24010_001	Banana	endoplasmic reticulum, extracellular	66.8	70.83
Solyc10g078220.1.1	Tomato	endoplasmic reticulum	70.14	70.55
CDX79965	Canola	endoplasmic reticulum, extracellular, vacuole	69.94	70.22
Os10t0196100-00	Rice	mitochondrion	32.81	69.58
Bra004591.1-P	Field mustard	endoplasmic reticulum, extracellular	68.76	69.03
CDY23876	Canola	endoplasmic reticulum, extracellular	68.37	68.64
HORVU0Hr1G031710.1	Barley	endoplasmic reticulum	69.16	68.48
Zm00001d038555_P001	Maize	plasma membrane	68.76	68.36
EES18431	Sorghum	endoplasmic reticulum	68.76	68.36
HORVU1Hr1G068030.1	Barley	endoplasmic reticulum	68.96	68.29
TraesCS1A01G310500.1	Wheat	golgi	68.37	67.97
TraesCS1D01G310000.1	Wheat	endoplasmic reticulum	68.17	67.77
TraesCS1B01G321800.1	Wheat	endoplasmic reticulum	68.17	67.77
Os05t0494000-01	Rice	plasma membrane	67.98	67.58
HORVU3Hr1G078660.1	Barley	endoplasmic reticulum, extracellular	66.8	66.8
TraesCS5A01G554000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	66.01	65.88
TraesCS3B01G361900.1	Wheat	endoplasmic reticulum	65.82	65.82
Zm00001d043174_P001	Maize	mitochondrion	66.21	65.69
TraesCS3A01G331800.1	Wheat	endoplasmic reticulum	65.42	65.42
EES03767	Sorghum	endoplasmic reticulum, extracellular	65.42	64.91
TraesCS3D01G325300.1	Wheat	endoplasmic reticulum	64.83	64.83
TraesCS4B01G393700.1	Wheat	extracellular, golgi	59.14	63.5
TraesCSU01G032400.1	Wheat	endoplasmic reticulum	32.22	60.74
TraesCSU01G032500.1	Wheat	cytosol, plasma membrane, plastid	62.67	59.29
GSMUA_Achr4P10110_001	Banana	endoplasmic reticulum, golgi	39.88	53.0
Solyc03g122360.2.1	Tomato	endoplasmic reticulum, golgi	35.36	35.57
Solyc03g115220.2.1	Tomato	extracellular, golgi	35.56	35.21
Solyc03g122350.2.1	Tomato	endoplasmic reticulum	34.18	34.25
Solyc11g030730.1.1	Tomato	endoplasmic reticulum, golgi	33.6	34.13
Solyc04g071820.2.1	Tomato	endoplasmic reticulum, golgi	33.2	33.53
Solyc11g066580.1.1	Tomato	endoplasmic reticulum, golgi	33.6	33.46
Solyc04g071780.2.1	Tomato	endoplasmic reticulum, golgi	32.42	32.61
Solyc04g071790.1.1	Tomato	golgi	32.61	32.55
Solyc04g054220.2.1	Tomato	extracellular, golgi	30.84	31.78
Solyc04g071800.2.1	Tomato	endoplasmic reticulum, golgi	31.63	31.63
Solyc04g054250.2.1	Tomato	endoplasmic reticulum, extracellular	30.45	31.5
Solyc10g009390.2.1	Tomato	endoplasmic reticulum, extracellular	34.38	31.47
Solyc04g011680.1.1	Tomato	endoplasmic reticulum, extracellular	30.84	31.46
Solyc04g054260.2.1	Tomato	endoplasmic reticulum, extracellular	30.84	31.4
Solyc04g011690.2.1	Tomato	endoplasmic reticulum, golgi	30.45	30.94
Solyc04g050620.2.1	Tomato	endoplasmic reticulum	29.86	30.77
Solyc04g083150.1.1	Tomato	nucleus	30.06	30.48
Solyc12g042480.1.1	Tomato	nucleus	29.47	30.24
Solyc12g045020.1.1	Tomato	endoplasmic reticulum	28.88	29.82

Protein Annotations

Gene3D:1.10.630.10	MapMan:21.6.1.2	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009809	GO:GO:0009987	GO:GO:0016020
GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:K4D266	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF0	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc10g078240.1	EnsemblPlants:Solyc10g078240.1.1
TMHMM:TMhelix	UniParc:UPI000276A235	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:60087768..60090325

Molecular Weight (calculated)

58009.6 Da

IEP (calculated)

9.169

GRAVY (calculated)

-0.239

Length

509 amino acids

Sequence
(BLAST)

001: MALFLIILTS IALIFLAHKL YHRLRFKLPP GPRPLPVVGN LYDIKPVRFR CFADWAQTYG PIFSVYFGSQ LNVVVTTAEL AKQVLKENDQ NLADRFRTRP
101: ANNLSRNGMD LIWADYGPHY VKVRKLCNLE LFTPKRLESL RPIREDEVTA MVESIFNDCT KPDNRGKSLL MREYLGSVAF NNITRLTFGK RFMNAAGEID
201: EQGQEFKGIV SNGIKIGGKL PLAEYVPWLR WFFSMENEAL VKHSERRDRL TRIIMDEHTL ARKQTGDTKQ HFVDALLTLQ KQYDLSDDTV IGLLWDMITA
301: GMDTTTITVE WAMAELVRNP RVQQKAQEEL DRVIGSDRIM SETDFSRLPY LQCVAKEALR LHPPTPLMLP HKASAGVKIG GYDIPKGAIV HVNVWAVARD
401: PAVWKDPLEF RPERFLEEDV DMKGHDYRLL PFGAGRRVCP GAQLAINLVT SMLGHLLHHF TWSPPPGVSP KDIDLTENPG TVTYMKNPIQ AIPTPRLPAH
501: LYKRVPMDM

Best Arabidopsis Sequence Match ( AT2G40890.1 )
(BLAST)

001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM

Arabidopsis Description

CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.