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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:mitochondrion
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400000230
PGSC0003DMT400011903
PGSC0003DMT400011904
PGSC0003DMT400013490
PGSC0003DMT400013956
PGSC0003DMT400015793
PGSC0003DMT400018493 endoplasmic reticulum
PGSC0003DMT400018494 endoplasmic reticulum
PGSC0003DMT400018497 endoplasmic reticulum
PGSC0003DMT400018498 endoplasmic reticulum
PGSC0003DMT400019164
PGSC0003DMT400029745
PGSC0003DMT400032086
PGSC0003DMT400037158
PGSC0003DMT400038202 endoplasmic reticulum
PGSC0003DMT400038205 endoplasmic reticulum
PGSC0003DMT400047688
PGSC0003DMT400047969
PGSC0003DMT400048727
PGSC0003DMT400049928
PGSC0003DMT400060862
PGSC0003DMT400060959
PGSC0003DMT400072932
PGSC0003DMT400075164 endoplasmic reticulum
PGSC0003DMT400078288 endoplasmic reticulum
PGSC0003DMT400078290 endoplasmic reticulum
PGSC0003DMT400093662

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40890.1 PGSC0003DMT400047969 AT1G20330.1 23175744
AT2G40890.1 PGSC0003DMT400048727 AT1G20330.1 23175744
AT2G40890.1 PGSC0003DMT400093662 AT1G20330.1 23175744
AT2G40890.1 PGSC0003DMT400011903 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400011904 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400013490 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400029745 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400060862 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400060959 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400032086 AT1G64090.2 23175744
AT2G40890.1 PGSC0003DMT400072932 AT2G03510.1 23175744
AT2G40890.1 PGSC0003DMT400015793 AT2G20990.3 23175744
AT2G40890.1 PGSC0003DMT400078288 AT2G30490.1 23175744
AT2G40890.1 PGSC0003DMT400078290 AT2G30490.1 23175744
AT2G40890.1 PGSC0003DMT400078288 AT2G30490.1 23175744
AT2G40890.1 PGSC0003DMT400078290 AT2G30490.1 23175744
AT2G40890.1 PGSC0003DMT400018493 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400018494 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400018497 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400018498 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400038202 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400038205 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400075164 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400000230 AT2G46170.1 23175744
AT2G40890.1 PGSC0003DMT400049928 AT2G46170.1 23175744
AT2G40890.1 PGSC0003DMT400037158 AT3G48890.1 23175744
AT2G40890.1 PGSC0003DMT400019164 AT5G22460.1 23175744
AT2G40890.1 PGSC0003DMT400032086 AT5G41600.1 23175744
AT2G40890.1 PGSC0003DMT400013956 AT5G53560.1 23175744
AT2G40890.1 PGSC0003DMT400047688 AT5G53560.1 23175744
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g078240.1.1 Tomato endoplasmic reticulum, extracellular 98.43 98.23
PGSC0003DMT400008504 Potato cytosol 33.07 80.77
VIT_08s0040g00780.t01 Wine grape extracellular, golgi 75.2 75.2
KRH66683 Soybean extracellular, golgi 74.02 73.87
PGSC0003DMT400038202 Potato extracellular, golgi 73.03 73.18
PGSC0003DMT400038205 Potato extracellular, golgi 73.03 73.18
PGSC0003DMT400075164 Potato cytosol 64.76 72.95
CDY35432 Canola endoplasmic reticulum, extracellular, vacuole 72.64 72.64
KRG95042 Soybean mitochondrion 72.64 72.5
AT2G40890.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 72.44 72.44
PGSC0003DMT400018494 Potato endoplasmic reticulum, extracellular 72.44 72.3
Bra000211.1-P Field mustard endoplasmic reticulum, extracellular 72.24 72.24
CDY14751 Canola endoplasmic reticulum 72.05 72.05
CDY06955 Canola endoplasmic reticulum 72.05 72.05
CDY22488 Canola cytosol, mitochondrion 50.0 71.75
Bra016964.1-P Field mustard endoplasmic reticulum 69.09 71.2
PGSC0003DMT400018497 Potato endoplasmic reticulum, golgi 61.61 70.34
GSMUA_Achr8P24010_001 Banana endoplasmic reticulum, extracellular 66.34 70.21
Os10t0196100-00 Rice mitochondrion 33.07 70.0
CDX79965 Canola endoplasmic reticulum, extracellular, vacuole 69.29 69.43
HORVU0Hr1G031710.1 Barley endoplasmic reticulum 69.29 68.48
Bra004591.1-P Field mustard endoplasmic reticulum, extracellular 68.31 68.44
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 69.09 68.29
CDY23876 Canola endoplasmic reticulum, extracellular 68.11 68.24
EES18431 Sorghum endoplasmic reticulum 68.5 67.97
Zm00001d038555_P001 Maize plasma membrane 68.5 67.97
TraesCS1A01G310500.1 Wheat golgi 68.5 67.97
TraesCS1D01G310000.1 Wheat endoplasmic reticulum 68.31 67.77
TraesCS1B01G321800.1 Wheat endoplasmic reticulum 68.31 67.77
Os05t0494000-01 Rice plasma membrane 67.91 67.38
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 66.93 66.8
Zm00001d043174_P001 Maize mitochondrion 66.54 65.89
TraesCS5A01G554000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 66.14 65.88
TraesCS3B01G361900.1 Wheat endoplasmic reticulum 65.94 65.82
TraesCS3A01G331800.1 Wheat endoplasmic reticulum 65.55 65.42
PGSC0003DMT400018498 Potato endoplasmic reticulum, golgi 39.76 65.16
EES03767 Sorghum endoplasmic reticulum, extracellular 65.75 65.11
TraesCS3D01G325300.1 Wheat endoplasmic reticulum 64.96 64.83
TraesCS4B01G393700.1 Wheat extracellular, golgi 59.06 63.29
TraesCSU01G032400.1 Wheat endoplasmic reticulum 31.89 60.0
TraesCSU01G032500.1 Wheat cytosol, plasma membrane, plastid 62.6 59.11
GSMUA_Achr4P10110_001 Banana endoplasmic reticulum, golgi 39.57 52.48
PGSC0003DMT400019769 Potato cytosol 17.91 40.27
PGSC0003DMT400063351 Potato endoplasmic reticulum 33.46 37.36
PGSC0003DMT400058927 Potato cytosol, endoplasmic reticulum, plastid 29.33 36.97
PGSC0003DMT400016302 Potato cytosol, extracellular 29.72 35.61
PGSC0003DMT400058930 Potato endoplasmic reticulum, golgi 35.24 35.17
PGSC0003DMT400001124 Potato cytosol, endoplasmic reticulum, plastid 30.71 34.9
PGSC0003DMT400036189 Potato endoplasmic reticulum 33.86 34.26
PGSC0003DMT400002923 Potato endoplasmic reticulum, golgi 33.27 33.53
PGSC0003DMT400046535 Potato golgi 33.46 33.4
PGSC0003DMT400019773 Potato mitochondrion 25.0 33.16
PGSC0003DMT400050783 Potato cytosol, golgi, plastid 30.51 32.91
PGSC0003DMT400019779 Potato cytosol, golgi, plastid 30.51 32.91
PGSC0003DMT400016296 Potato golgi 32.68 32.81
PGSC0003DMT400014232 Potato endoplasmic reticulum, golgi 32.68 32.61
PGSC0003DMT400075101 Potato cytosol 27.56 32.18
PGSC0003DMT400083869 Potato cytosol 22.24 32.01
PGSC0003DMT400048583 Potato endoplasmic reticulum 34.25 31.58
PGSC0003DMT400033701 Potato endoplasmic reticulum, extracellular 30.51 31.44
PGSC0003DMT400061231 Potato extracellular, golgi, plasma membrane 30.51 31.06
PGSC0003DMT400033311 Potato endoplasmic reticulum, extracellular 30.12 30.97
PGSC0003DMT400033313 Potato endoplasmic reticulum, extracellular 30.12 30.85
PGSC0003DMT400033335 Potato endoplasmic reticulum 29.92 30.58
PGSC0003DMT400024894 Potato endoplasmic reticulum, extracellular 30.51 30.57
PGSC0003DMT400016263 Potato extracellular 29.92 30.46
PGSC0003DMT400065984 Potato endoplasmic reticulum, golgi 26.97 30.04
PGSC0003DMT400037425 Potato endoplasmic reticulum, extracellular 29.13 30.02
PGSC0003DMT400036391 Potato endoplasmic reticulum, extracellular 29.13 29.72
PGSC0003DMT400012312 Potato extracellular, golgi 20.47 29.55
PGSC0003DMT400036399 Potato endoplasmic reticulum, extracellular 28.35 29.27
PGSC0003DMT400001740 Potato mitochondrion 26.18 29.23
PGSC0003DMT400025446 Potato extracellular, golgi 28.35 28.57
PGSC0003DMT400036390 Potato endoplasmic reticulum, extracellular 10.63 24.0
PGSC0003DMT400016243 Potato endoplasmic reticulum, extracellular 11.02 23.24
PGSC0003DMT400004816 Potato extracellular, golgi 30.71 23.04
PGSC0003DMT400025448 Potato cytosol 10.63 22.22
PGSC0003DMT400065985 Potato extracellular, golgi 13.19 22.11
PGSC0003DMT400036397 Potato mitochondrion 13.19 21.75
Protein Annotations
Gene3D:1.10.630.10EntrezGene:102578747MapMan:21.6.1.2InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114InterPro:IPR036396UniProt:M1AAR1PFAM:PF00067EnsemblPlantsGene:PGSC0003DMG400007178PGSC:PGSC0003DMG400007178
EnsemblPlants:PGSC0003DMT400018493PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF0
SUPFAM:SSF48264UniParc:UPI000296945BRefSeq:XP_006364777.1SEG:seg::
Description
P-coumaroyl quinate/shikimate 3'-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400007178]
Coordinates
chr10:+:59468654..59471590
Molecular Weight (calculated)
57784.2 Da
IEP (calculated)
8.550
GRAVY (calculated)
-0.244
Length
508 amino acids
Sequence
(BLAST)
001: MALFLILTSI ALIFVAHKLY HRLRFKLPPG PRPLPVVGNL YDIKPVRFRC FADWAQTYGP IFSVYFGSQL NVVVTTAELA KQVLKENDQN LADRFRTRPA
101: NNLSRNGMDL IWADYGPHYV KVRKLCNLEL FTPKRLESLR PIREEEVTAM VENIFNDSTK PDNTGKSLLM REYLGSVAFN NITRLTFGKR FMNAAGEIDE
201: QGQEFKGIVS NGIKIGGKLP LAEYVPWLRW FFSMENEALV KHSERRDRLT RIIMDEHTLA RKQTGDTKQH FVDALLTLQK QYDLSDDTVI GLLWDMITAG
301: MDTTTITVEW AMAELVRNPR VQQKAQEELD RVIGSDRIMS ETDFSGLPYL QCVAKEALRL HPPTPLMLPH KASASVKIGG YDIPKGAIVH VNVWAVARDP
401: AVWKDPLEFR PERFLEEDVD MKGHDYRLLP FGAGRRVCPG AQLAINLVTS MLGHLLHHFT WSPPPGVSPE DIDLTENPGT VTYMKNPIQA IPTPRLPAHL
501: YKRVPMDM
Best Arabidopsis Sequence Match ( AT2G40890.1 )
(BLAST)
001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
Arabidopsis Description
CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.