Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400000230 | |
| PGSC0003DMT400011903 | |
| PGSC0003DMT400011904 | |
| PGSC0003DMT400013490 | |
| PGSC0003DMT400013956 | |
| PGSC0003DMT400015793 | |
| PGSC0003DMT400018493 | endoplasmic reticulum |
| PGSC0003DMT400018494 | endoplasmic reticulum |
| PGSC0003DMT400018497 | endoplasmic reticulum |
| PGSC0003DMT400018498 | endoplasmic reticulum |
| PGSC0003DMT400019164 | |
| PGSC0003DMT400029745 | |
| PGSC0003DMT400032086 | |
| PGSC0003DMT400037158 | |
| PGSC0003DMT400038202 | endoplasmic reticulum |
| PGSC0003DMT400038205 | endoplasmic reticulum |
| PGSC0003DMT400047688 | |
| PGSC0003DMT400047969 | |
| PGSC0003DMT400048727 | |
| PGSC0003DMT400049928 | |
| PGSC0003DMT400060862 | |
| PGSC0003DMT400060959 | |
| PGSC0003DMT400072932 | |
| PGSC0003DMT400075164 | endoplasmic reticulum |
| PGSC0003DMT400078288 | endoplasmic reticulum |
| PGSC0003DMT400078290 | endoplasmic reticulum |
| PGSC0003DMT400093662 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018494 | Potato | endoplasmic reticulum, extracellular | 99.11 | 87.82 |
| Solyc10g078230.1.1 | Tomato | endoplasmic reticulum, extracellular | 92.68 | 82.12 |
| PGSC0003DMT400018497 | Potato | endoplasmic reticulum, golgi | 76.5 | 77.53 |
| PGSC0003DMT400018498 | Potato | endoplasmic reticulum, golgi | 48.34 | 70.32 |
| PGSC0003DMT400008504 | Potato | cytosol | 32.15 | 69.71 |
| PGSC0003DMT400038202 | Potato | extracellular, golgi | 77.83 | 69.23 |
| PGSC0003DMT400038205 | Potato | extracellular, golgi | 77.83 | 69.23 |
| PGSC0003DMT400018493 | Potato | endoplasmic reticulum, extracellular | 72.95 | 64.76 |
| CDY22488 | Canola | cytosol, mitochondrion | 49.22 | 62.71 |
| Os10t0196100-00 | Rice | mitochondrion | 31.93 | 60.0 |
| VIT_08s0040g00780.t01 | Wine grape | extracellular, golgi | 66.96 | 59.45 |
| AT2G40890.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 66.52 | 59.06 |
| CDY35432 | Canola | endoplasmic reticulum, extracellular, vacuole | 66.08 | 58.66 |
| Bra000211.1-P | Field mustard | endoplasmic reticulum, extracellular | 65.85 | 58.46 |
| CDY14751 | Canola | endoplasmic reticulum | 65.63 | 58.27 |
| CDY06955 | Canola | endoplasmic reticulum | 65.63 | 58.27 |
| KRH66683 | Soybean | extracellular, golgi | 65.63 | 58.15 |
| GSMUA_Achr8P24010_001 | Banana | endoplasmic reticulum, extracellular | 61.86 | 58.12 |
| CDX79965 | Canola | endoplasmic reticulum, extracellular, vacuole | 64.97 | 57.79 |
| Bra004591.1-P | Field mustard | endoplasmic reticulum, extracellular | 64.75 | 57.59 |
| KRG95042 | Soybean | mitochondrion | 64.97 | 57.56 |
| CDY23876 | Canola | endoplasmic reticulum, extracellular | 64.52 | 57.4 |
| Bra016964.1-P | Field mustard | endoplasmic reticulum | 61.64 | 56.39 |
| Zm00001d038555_P001 | Maize | plasma membrane | 62.53 | 55.08 |
| EES18431 | Sorghum | endoplasmic reticulum | 62.31 | 54.88 |
| Os05t0494000-01 | Rice | plasma membrane | 61.42 | 54.1 |
| TraesCS3B01G361900.1 | Wheat | endoplasmic reticulum | 60.53 | 53.63 |
| HORVU3Hr1G078660.1 | Barley | endoplasmic reticulum, extracellular | 60.31 | 53.44 |
| HORVU1Hr1G068030.1 | Barley | endoplasmic reticulum | 60.75 | 53.31 |
| Zm00001d043174_P001 | Maize | mitochondrion | 60.53 | 53.22 |
| TraesCS5A01G554000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 60.09 | 53.14 |
| TraesCS1B01G321800.1 | Wheat | endoplasmic reticulum | 60.31 | 53.12 |
| TraesCS1A01G310500.1 | Wheat | golgi | 60.31 | 53.12 |
| HORVU0Hr1G031710.1 | Barley | endoplasmic reticulum | 60.53 | 53.11 |
| TraesCS3D01G325300.1 | Wheat | endoplasmic reticulum | 59.87 | 53.05 |
| TraesCS1D01G310000.1 | Wheat | endoplasmic reticulum | 60.09 | 52.93 |
| EES03767 | Sorghum | endoplasmic reticulum, extracellular | 60.09 | 52.83 |
| TraesCS3A01G331800.1 | Wheat | endoplasmic reticulum | 59.42 | 52.65 |
| TraesCS4B01G393700.1 | Wheat | extracellular, golgi | 52.55 | 50.0 |
| TraesCSU01G032500.1 | Wheat | cytosol, plasma membrane, plastid | 56.76 | 47.58 |
| PGSC0003DMT400019769 | Potato | cytosol | 21.73 | 43.36 |
| TraesCSU01G032400.1 | Wheat | endoplasmic reticulum | 25.94 | 43.33 |
| GSMUA_Achr4P10110_001 | Banana | endoplasmic reticulum, golgi | 36.59 | 43.08 |
| PGSC0003DMT400058927 | Potato | cytosol, endoplasmic reticulum, plastid | 33.26 | 37.22 |
| PGSC0003DMT400063351 | Potato | endoplasmic reticulum | 37.25 | 36.92 |
| PGSC0003DMT400016302 | Potato | cytosol, extracellular | 34.37 | 36.56 |
| PGSC0003DMT400001124 | Potato | cytosol, endoplasmic reticulum, plastid | 35.03 | 35.35 |
| PGSC0003DMT400083869 | Potato | cytosol | 27.27 | 34.84 |
| PGSC0003DMT400075101 | Potato | cytosol | 33.26 | 34.48 |
| PGSC0003DMT400019773 | Potato | mitochondrion | 28.82 | 33.94 |
| PGSC0003DMT400016296 | Potato | golgi | 36.81 | 32.81 |
| PGSC0003DMT400058930 | Potato | endoplasmic reticulum, golgi | 36.81 | 32.61 |
| PGSC0003DMT400036189 | Potato | endoplasmic reticulum | 35.92 | 32.27 |
| PGSC0003DMT400002923 | Potato | endoplasmic reticulum, golgi | 35.7 | 31.94 |
| PGSC0003DMT400033311 | Potato | endoplasmic reticulum, extracellular | 34.37 | 31.38 |
| PGSC0003DMT400014232 | Potato | endoplasmic reticulum, golgi | 35.26 | 31.24 |
| PGSC0003DMT400046535 | Potato | golgi | 35.26 | 31.24 |
| PGSC0003DMT400019779 | Potato | cytosol, golgi, plastid | 32.37 | 31.0 |
| PGSC0003DMT400050783 | Potato | cytosol, golgi, plastid | 32.37 | 31.0 |
| PGSC0003DMT400033701 | Potato | endoplasmic reticulum, extracellular | 33.48 | 30.63 |
| PGSC0003DMT400065984 | Potato | endoplasmic reticulum, golgi | 30.82 | 30.48 |
| PGSC0003DMT400033313 | Potato | endoplasmic reticulum, extracellular | 33.26 | 30.24 |
| PGSC0003DMT400048583 | Potato | endoplasmic reticulum | 36.81 | 30.13 |
| PGSC0003DMT400001740 | Potato | mitochondrion | 30.38 | 30.11 |
| PGSC0003DMT400036391 | Potato | endoplasmic reticulum, extracellular | 33.04 | 29.92 |
| PGSC0003DMT400024894 | Potato | endoplasmic reticulum, extracellular | 33.04 | 29.39 |
| PGSC0003DMT400033335 | Potato | endoplasmic reticulum | 32.37 | 29.38 |
| PGSC0003DMT400037425 | Potato | endoplasmic reticulum, extracellular | 31.71 | 29.01 |
| PGSC0003DMT400061231 | Potato | extracellular, golgi, plasma membrane | 31.93 | 28.86 |
| PGSC0003DMT400036399 | Potato | endoplasmic reticulum, extracellular | 31.26 | 28.66 |
| PGSC0003DMT400025446 | Potato | extracellular, golgi | 31.71 | 28.37 |
| PGSC0003DMT400016263 | Potato | extracellular | 31.04 | 28.06 |
| PGSC0003DMT400012312 | Potato | extracellular, golgi | 19.07 | 24.43 |
| PGSC0003DMT400025448 | Potato | cytosol | 12.2 | 22.63 |
| PGSC0003DMT400004816 | Potato | extracellular, golgi | 32.37 | 21.57 |
| PGSC0003DMT400065985 | Potato | extracellular, golgi | 13.97 | 20.79 |
| PGSC0003DMT400016243 | Potato | endoplasmic reticulum, extracellular | 10.86 | 20.33 |
| PGSC0003DMT400036390 | Potato | endoplasmic reticulum, extracellular | 9.76 | 19.56 |
| PGSC0003DMT400036397 | Potato | mitochondrion | 12.86 | 18.83 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:21.6.1.2 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 | GO:GO:0055114 |
| InterPro:IPR036396 | UniProt:M1CUQ9 | PFAM:PF00067 | EnsemblPlantsGene:PGSC0003DMG400029243 | PGSC:PGSC0003DMG400029243 | EnsemblPlants:PGSC0003DMT400075164 |
| PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF0 | SUPFAM:SSF48264 |
| UniParc:UPI0002957307 | SEG:seg | : | : | : | : |
Description
P-coumaroyl quinate/shikimate 3'-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400029243]
Coordinates
chr00:+:36321415..36323915
Molecular Weight (calculated)
51341.1 Da
IEP (calculated)
6.682
GRAVY (calculated)
-0.286
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: YGPIFSFYLG SQLNVVVSNA ELAKEVLKDN DQNLANRFRT KPLENVSKNG KDLIWADYGP HYVKVRKVCN LELFTTKRLE ALRPIREDEV TAMVESIFKD
101: CTKPGNVSKS MMLRGYLGSV AFNNITRLTF GKRFINSKGE VDEQGEELKA IVTDGIRISG KPNLGEFVPW LRWVFKDDNE ALEAQDKHLD EFTRLIMEEH
201: TIARKITGET KHHFVDALLT LQKEYDLSDD TIISLFWDMI AAGMDTVAIT VEWAMTELAK NPRVQQKVQE ELDRVIGSDR IVNETDISNL SYLQHVVKES
301: LRMHPPTPLM LPHMAGNNVK VGGYNIPKGS IVHVNVWALG RDPKIWKEPL QFRPERFIEE DVDMKGHDYK LLPFGAGRRI CPGMNLAVNL VTSMLAHLLH
401: HFVWSLPNGV KAEDVDMMES PGTVTYMQTP LHVVPTPRLP IHLYNTCSMN M
101: CTKPGNVSKS MMLRGYLGSV AFNNITRLTF GKRFINSKGE VDEQGEELKA IVTDGIRISG KPNLGEFVPW LRWVFKDDNE ALEAQDKHLD EFTRLIMEEH
201: TIARKITGET KHHFVDALLT LQKEYDLSDD TIISLFWDMI AAGMDTVAIT VEWAMTELAK NPRVQQKVQE ELDRVIGSDR IVNETDISNL SYLQHVVKES
301: LRMHPPTPLM LPHMAGNNVK VGGYNIPKGS IVHVNVWALG RDPKIWKEPL QFRPERFIEE DVDMKGHDYK LLPFGAGRRI CPGMNLAVNL VTSMLAHLLH
401: HFVWSLPNGV KAEDVDMMES PGTVTYMQTP LHVVPTPRLP IHLYNTCSMN M
001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
Arabidopsis Description
CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.