Factsheet for PGSC0003DMT400019769

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083869	Potato	cytosol	77.88	49.86
PGSC0003DMT400075101	Potato	cytosol	84.96	44.14
PGSC0003DMT400008504	Potato	cytosol	39.38	42.79
Solyc04g050620.2.1	Tomato	endoplasmic reticulum	91.59	41.9
PGSC0003DMT400033311	Potato	endoplasmic reticulum, extracellular	89.82	41.09
PGSC0003DMT400019773	Potato	mitochondrion	68.58	40.47
PGSC0003DMT400036391	Potato	endoplasmic reticulum, extracellular	79.2	35.94
PGSC0003DMT400033313	Potato	endoplasmic reticulum, extracellular	77.43	35.28
VIT_07s0031g01370.t01	Wine grape	plastid	57.08	34.31
PGSC0003DMT400037425	Potato	endoplasmic reticulum, extracellular	74.78	34.28
PGSC0003DMT400065984	Potato	endoplasmic reticulum, golgi	68.58	33.99
PGSC0003DMT400036399	Potato	endoplasmic reticulum, extracellular	72.57	33.33
PGSC0003DMT400019779	Potato	cytosol, golgi, plastid	68.58	32.91
PGSC0003DMT400050783	Potato	cytosol, golgi, plastid	68.58	32.91
PGSC0003DMT400033335	Potato	endoplasmic reticulum	69.47	31.59
PGSC0003DMT400033701	Potato	endoplasmic reticulum, extracellular	68.14	31.24
PGSC0003DMT400025446	Potato	extracellular, golgi	69.03	30.95
PGSC0003DMT400061231	Potato	extracellular, golgi, plasma membrane	68.14	30.86
PGSC0003DMT400016263	Potato	extracellular	67.7	30.66
PGSC0003DMT400001740	Potato	mitochondrion	60.62	30.11
VIT_07s0031g01380.t01	Wine grape	mitochondrion	61.06	29.05
VIT_07s0031g01390.t01	Wine grape	endoplasmic reticulum, extracellular	63.27	28.71
KRH59431	Soybean	endoplasmic reticulum, mitochondrion	58.85	26.76
KRH43296	Soybean	endoplasmic reticulum, mitochondrion	57.52	26.37
KRH43299	Soybean	endoplasmic reticulum, extracellular	56.19	25.5
KRH43298	Soybean	endoplasmic reticulum, golgi	56.19	25.4
PGSC0003DMT400024894	Potato	endoplasmic reticulum, extracellular	52.65	23.47
PGSC0003DMT400004816	Potato	extracellular, golgi	69.47	23.19
PGSC0003DMT400075164	Potato	cytosol	43.36	21.73
PGSC0003DMT400063351	Potato	endoplasmic reticulum	42.48	21.1
PGSC0003DMT400001124	Potato	cytosol, endoplasmic reticulum, plastid	40.71	20.58
PGSC0003DMT400016302	Potato	cytosol, extracellular	37.17	19.81
PGSC0003DMT400018494	Potato	endoplasmic reticulum, extracellular	43.36	19.25
PGSC0003DMT400058930	Potato	endoplasmic reticulum, golgi	41.15	18.27
PGSC0003DMT400038202	Potato	extracellular, golgi	40.71	18.15
PGSC0003DMT400038205	Potato	extracellular, golgi	40.71	18.15
PGSC0003DMT400018493	Potato	endoplasmic reticulum, extracellular	40.27	17.91
PGSC0003DMT400058927	Potato	cytosol, endoplasmic reticulum, plastid	31.86	17.87
PGSC0003DMT400048583	Potato	endoplasmic reticulum	41.15	16.88
PGSC0003DMT400002923	Potato	endoplasmic reticulum, golgi	37.17	16.67
PGSC0003DMT400036189	Potato	endoplasmic reticulum	36.73	16.53
PGSC0003DMT400018497	Potato	endoplasmic reticulum, golgi	32.3	16.4
PGSC0003DMT400014232	Potato	endoplasmic reticulum, golgi	36.73	16.31
PGSC0003DMT400046535	Potato	golgi	36.73	16.31
PGSC0003DMT400016296	Potato	golgi	36.28	16.21
PGSC0003DMT400025448	Potato	cytosol	10.18	9.47
PGSC0003DMT400065985	Potato	extracellular, golgi	10.62	7.92
PGSC0003DMT400036397	Potato	mitochondrion	10.62	7.79
PGSC0003DMT400012312	Potato	extracellular, golgi	11.95	7.67
PGSC0003DMT400018498	Potato	endoplasmic reticulum, golgi	1.33	0.97
PGSC0003DMT400016243	Potato	endoplasmic reticulum, extracellular	0.0	0.0
PGSC0003DMT400036390	Potato	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M1ACJ8	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400007639	PGSC:PGSC0003DMG400007639	EnsemblPlants:PGSC0003DMT400019769
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF157	SUPFAM:SSF48264
UniParc:UPI000294A247	:	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400007639]

Coordinates

chr4:-:53481630..53482598

Molecular Weight (calculated)

26059.8 Da

IEP (calculated)

6.161

GRAVY (calculated)

-0.151

Length

226 amino acids

Sequence
(BLAST)

001: MDIMQSGEAK FQFDRRHIKA ILFDMLIAAM DTTASSTEWI LTELLRHPQV TKKLQKELQQ VVGLDRMVEE SDLENLNYLD MVVKEGLRLH PVAPLFYHES
101: MEDCVVDGFH VQKGSRIIIN CYAIHRDPNV WPEPEKFLPE RFVGSSVDFR GRDFQLLPFG SGRRSCPGMQ LAVTIVRLVV AQLVHCFEWE LPNGIQPCDL
201: DIDEKFGIVT CREKPLMAIP TYRLKK

Best Arabidopsis Sequence Match ( AT2G45550.1 )
(BLAST)

001: MDIISGQALF LLFCFISSCF LISTTARSRR SSGRAATLPP GPPRLPIIGN IHQVGKNPHS SFADLAKIYG PIMSLKFGCL NSVVITSPEA AREVLRTHDQ
101: ILSGRKSNDS IRCFGHEEVS VIWLPPSSAR WRMLRKLSVT LMFSPQRTEA TKALRMKKVQ ELVSFMNESS ERKEAVDISR ASYTTVLNII SNILFSVDLG
201: SYDSKKSNEF QDTVIGAMEA AGKPDAANYF PFMGFLDLQG NRKAMRGLTE RLFRVFRGFM DAKIAEKSLG NYSKDVSNRD FLDSLLILNE GDEAELDNND
301: IEHLLLDMFT AGTDTSSSTL EWAMAELLRN PKTMVKAQAE MDRVLGQNSV VQESDISGLP YLQAVVKETF RLHPAAPLLV PRKAESDVEV LGFMVPKDTQ
401: VLVNVWAIGR DPSVWENPSQ FEPERFMGKD IDVKGRDYEL TPFGGGRRIC PGLPLAVKTV SLMLASLLYS FDWKLPNGVV SEDLDMDETF GITLHRTNTL
501: YAIPVKKQTI N

Arabidopsis Description

CYP76C4Cytochrome P450 76C4 [Source:UniProtKB/Swiss-Prot;Acc:O64635]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.