Factsheet for PGSC0003DMT400083869

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
endoplasmic reticulum 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019769	Potato	cytosol	49.86	77.88
PGSC0003DMT400036391	Potato	endoplasmic reticulum, extracellular	90.93	64.46
PGSC0003DMT400075101	Potato	cytosol	74.22	60.23
PGSC0003DMT400033311	Potato	endoplasmic reticulum, extracellular	78.75	56.28
PGSC0003DMT400019773	Potato	mitochondrion	60.62	55.87
VIT_07s0031g01370.t01	Wine grape	plastid	58.36	54.79
PGSC0003DMT400037425	Potato	endoplasmic reticulum, extracellular	75.64	54.16
PGSC0003DMT400036399	Potato	endoplasmic reticulum, extracellular	75.35	54.06
PGSC0003DMT400033313	Potato	endoplasmic reticulum, extracellular	72.8	51.81
PGSC0003DMT400065984	Potato	endoplasmic reticulum, golgi	65.72	50.88
PGSC0003DMT400033335	Potato	endoplasmic reticulum	67.42	47.89
PGSC0003DMT400025446	Potato	extracellular, golgi	66.29	46.43
PGSC0003DMT400001740	Potato	mitochondrion	58.07	45.05
PGSC0003DMT400019779	Potato	cytosol, golgi, plastid	60.06	45.01
PGSC0003DMT400050783	Potato	cytosol, golgi, plastid	60.06	45.01
PGSC0003DMT400025448	Potato	cytosol	30.88	44.86
PGSC0003DMT400036397	Potato	mitochondrion	39.09	44.81
PGSC0003DMT400033701	Potato	endoplasmic reticulum, extracellular	62.32	44.62
PGSC0003DMT400061231	Potato	extracellular, golgi, plasma membrane	62.89	44.49
VIT_07s0031g01380.t01	Wine grape	mitochondrion	59.77	44.42
PGSC0003DMT400016263	Potato	extracellular	62.32	44.09
VIT_07s0031g01390.t01	Wine grape	endoplasmic reticulum, extracellular	61.47	43.57
PGSC0003DMT400065985	Potato	extracellular, golgi	36.54	42.57
KRH59431	Soybean	endoplasmic reticulum, mitochondrion	59.49	42.25
PGSC0003DMT400008504	Potato	cytosol	24.65	41.83
KRH43298	Soybean	endoplasmic reticulum, golgi	58.92	41.6
KRH43296	Soybean	endoplasmic reticulum, mitochondrion	57.79	41.38
KRH43299	Soybean	endoplasmic reticulum, extracellular	58.07	41.16
PGSC0003DMT400004816	Potato	extracellular, golgi	64.87	33.83
PGSC0003DMT400024894	Potato	endoplasmic reticulum, extracellular	47.59	33.14
PGSC0003DMT400036390	Potato	endoplasmic reticulum, extracellular	20.4	32.0
PGSC0003DMT400058927	Potato	cytosol, endoplasmic reticulum, plastid	33.71	29.53
PGSC0003DMT400063351	Potato	endoplasmic reticulum	37.39	29.01
PGSC0003DMT400016302	Potato	cytosol, extracellular	33.99	28.3
PGSC0003DMT400001124	Potato	cytosol, endoplasmic reticulum, plastid	35.69	28.19
PGSC0003DMT400075164	Potato	cytosol	34.84	27.27
PGSC0003DMT400058930	Potato	endoplasmic reticulum, golgi	38.24	26.52
PGSC0003DMT400018494	Potato	endoplasmic reticulum, extracellular	34.56	23.97
PGSC0003DMT400014232	Potato	endoplasmic reticulum, golgi	33.99	23.58
PGSC0003DMT400046535	Potato	golgi	33.43	23.18
PGSC0003DMT400038205	Potato	extracellular, golgi	33.14	23.08
PGSC0003DMT400038202	Potato	extracellular, golgi	33.14	23.08
PGSC0003DMT400016296	Potato	golgi	32.58	22.73
PGSC0003DMT400048583	Potato	endoplasmic reticulum	34.84	22.32
PGSC0003DMT400036189	Potato	endoplasmic reticulum	31.73	22.31
PGSC0003DMT400018497	Potato	endoplasmic reticulum, golgi	28.05	22.25
PGSC0003DMT400018493	Potato	endoplasmic reticulum, extracellular	32.01	22.24
PGSC0003DMT400016243	Potato	endoplasmic reticulum, extracellular	15.01	21.99
PGSC0003DMT400002923	Potato	endoplasmic reticulum, golgi	31.16	21.83
PGSC0003DMT400012312	Potato	extracellular, golgi	16.43	16.48
PGSC0003DMT400018498	Potato	endoplasmic reticulum, golgi	8.78	10.0

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M1D788
PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400033636	PGSC:PGSC0003DMG400033636	EnsemblPlants:PGSC0003DMT400083869	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF157	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00029667DE
SEG:seg	:	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400033636]

Coordinates

chr12:-:51940842..51942720

Molecular Weight (calculated)

40355.2 Da

IEP (calculated)

5.601

GRAVY (calculated)

-0.137

Length

353 amino acids

Sequence
(BLAST)

001: MRRQQVELMI KSLKNEACHH RAVVDLSAKI SSLSADLTCL MVFGKKYTDE DLDKRGFKAV VNDVEHLAAT PNLGDFFPFL GVIDLQGLTR RLKELSKVFD
101: EFLEKIIDEH VQSGDQKQSK DFVDTMLDIM QSGEAEFQFD RRHIKAILFD MLIAAMGTSA TAIEWILTEL LRHPHVMKKL QKELEEVVGL ERMVKESDLE
201: KLNYLDMVVK EGLRLHAVAP LIPHEAMEDC IVNNFHIQKG SRILINFYAV QRDPDIWPEP EKFLPERFVG SNIDIRGHDF QLLPFGSGRR SCPGMQLGII
301: IVQLIVAQLV HCFDWELPKG MQPCNLDVEE NFGLATSREN PLMAIPTYRL NNV

Best Arabidopsis Sequence Match ( AT3G26210.1 )
(BLAST)

001: MSIFLCFLLL LLLLLVTIIF TRKSQSSKLK LPPGPPKLPI IGNLHYLNGL PHKCLLNLWK IHGPVMQLQL GYVPLVVISS NQAAEEVLKT HDLDCCSRPE
101: TIASKTISYN FKDIGFAPYG EEWRALRKLA VIELFSLKKF NSFRYIREEE NDLLVKKLSE ASEKQSPVNL KKALFTLSAS IVCRLAFGQN LHESEFIDED
201: SMEDLASRSE KIQAKFAFSN FFPGGWILDK ITGQSKSLNE IFADLDGFFN QVLDDHLKPG RKVLETPDVV DVMIDMMNKQ SQDGSFKLTT DHIKGIISDI
301: FLAGVNTSAT TILWAMTELI RNPRVMKKVQ DEVRTVLGEK RDRITEQDLN QLNYFKLVIK ETFRLHPAAP LLLPREAMAK IKIQGYDIPE KTQIMVNVYA
401: IGRDPDLWEN PEEFKPERFV DSSVDYRGLN FELLPFGSGR RICPGMTMGI ATVELGLLNL LYFFDWGLPE GRTVKDIDLE EEGAIIIGKK VSLELVPTRR
501: Q

Arabidopsis Description

CYP71B23Cytochrome P450 71B23 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTM0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.