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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
mitochondrion: 24351685
msms PMID: 24351685 doi
F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller
Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400036390 Potato endoplasmic reticulum, extracellular 67.21 92.0
PGSC0003DMT400065985 Potato extracellular, golgi 73.38 74.59
PGSC0003DMT400025448 Potato cytosol 51.62 65.43
PGSC0003DMT400036391 Potato endoplasmic reticulum, extracellular 87.01 53.82
PGSC0003DMT400016243 Potato endoplasmic reticulum, extracellular 41.23 52.7
PGSC0003DMT400065984 Potato endoplasmic reticulum, golgi 70.13 47.37
PGSC0003DMT400037425 Potato endoplasmic reticulum, extracellular 74.68 46.65
PGSC0003DMT400033311 Potato endoplasmic reticulum, extracellular 74.03 46.15
PGSC0003DMT400036399 Potato endoplasmic reticulum, extracellular 69.81 43.7
PGSC0003DMT400033313 Potato endoplasmic reticulum, extracellular 65.26 40.52
PGSC0003DMT400075101 Potato cytosol 56.82 40.23
PGSC0003DMT400033335 Potato endoplasmic reticulum 63.96 39.64
PGSC0003DMT400025446 Potato extracellular, golgi 64.61 39.48
PGSC0003DMT400083869 Potato cytosol 44.81 39.09
PGSC0003DMT400019779 Potato cytosol, golgi, plastid 50.97 33.33
PGSC0003DMT400050783 Potato cytosol, golgi, plastid 50.97 33.33
PGSC0003DMT400061231 Potato extracellular, golgi, plasma membrane 53.9 33.27
PGSC0003DMT400016263 Potato extracellular 53.25 32.87
PGSC0003DMT400033701 Potato endoplasmic reticulum, extracellular 50.97 31.85
VIT_07s0031g01380.t01 Wine grape mitochondrion 48.05 31.16
VIT_07s0031g01390.t01 Wine grape endoplasmic reticulum, extracellular 50.32 31.12
KRH59431 Soybean endoplasmic reticulum, mitochondrion 50.0 30.99
PGSC0003DMT400001740 Potato mitochondrion 45.45 30.77
KRH43298 Soybean endoplasmic reticulum, golgi 49.68 30.6
KRH43296 Soybean endoplasmic reticulum, mitochondrion 48.05 30.02
KRH43299 Soybean endoplasmic reticulum, extracellular 48.05 29.72
PGSC0003DMT400019773 Potato mitochondrion 34.74 27.94
PGSC0003DMT400004816 Potato extracellular, golgi 55.84 25.41
PGSC0003DMT400012312 Potato extracellular, golgi 28.25 24.72
VIT_07s0031g01370.t01 Wine grape plastid 29.87 24.47
PGSC0003DMT400024894 Potato endoplasmic reticulum, extracellular 37.01 22.49
PGSC0003DMT400018498 Potato endoplasmic reticulum, golgi 21.1 20.97
PGSC0003DMT400058930 Potato endoplasmic reticulum, golgi 29.87 18.07
PGSC0003DMT400058927 Potato cytosol, endoplasmic reticulum, plastid 23.38 17.87
PGSC0003DMT400063351 Potato endoplasmic reticulum 25.0 16.92
PGSC0003DMT400001124 Potato cytosol, endoplasmic reticulum, plastid 24.03 16.55
PGSC0003DMT400048583 Potato endoplasmic reticulum 29.22 16.33
PGSC0003DMT400014232 Potato endoplasmic reticulum, golgi 26.95 16.31
PGSC0003DMT400016296 Potato golgi 26.62 16.21
PGSC0003DMT400046535 Potato golgi 26.62 16.11
PGSC0003DMT400018497 Potato endoplasmic reticulum, golgi 22.08 15.28
PGSC0003DMT400036189 Potato endoplasmic reticulum 24.68 15.14
PGSC0003DMT400002923 Potato endoplasmic reticulum, golgi 24.68 15.08
PGSC0003DMT400018494 Potato endoplasmic reticulum, extracellular 23.05 13.95
PGSC0003DMT400016302 Potato cytosol, extracellular 18.51 13.44
PGSC0003DMT400038205 Potato extracellular, golgi 22.08 13.41
PGSC0003DMT400038202 Potato extracellular, golgi 21.75 13.21
PGSC0003DMT400018493 Potato endoplasmic reticulum, extracellular 21.75 13.19
PGSC0003DMT400075164 Potato cytosol 18.83 12.86
PGSC0003DMT400019769 Potato cytosol 7.79 10.62
PGSC0003DMT400008504 Potato cytosol 0.65 0.96
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705
GO:GO:0020037GO:GO:0055114InterPro:IPR036396UniProt:M1B3L0PFAM:PF00067EnsemblPlantsGene:PGSC0003DMG400014012
PGSC:PGSC0003DMG400014012EnsemblPlants:PGSC0003DMT400036397PRINTS:PR00463PANTHER:PTHR24298PANTHER:PTHR24298:SF157SUPFAM:SSF48264
TMHMM:TMhelixUniParc:UPI0002954190SEG:seg:::
Description
Flavonoid 3-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400014012]
Coordinates
chr12:+:52044699..52046391
Molecular Weight (calculated)
35655.5 Da
IEP (calculated)
9.546
GRAVY (calculated)
-0.141
Length
308 amino acids
Sequence
(BLAST)
001: MALIWATLVV VFIVYAFYEL LNNIQNRKRY PPGPKGLPII GHLHLLGKNP HQDFLKLAKT HGPLMYVRLG LVPTIVVSSA DTAEKFLKTY DHIFASRPHN
101: EAAYYLAYGQ KNLISAKHGP YWRSMRKLCT QHLFGNQKIN SFQSMRKQQV EVMIKSLKNE ACDHRVVVDL SAKISSLNAD LTCLMVFGKK YMDEDLDKRG
201: FKALVKEVEH LAATPNLGEF FPFLGVIDLQ GLTRRIKDLS KVFDDFFEKI IDEHVQSRDQ KQSKDFVDTM LDIMQSGEAE FQFDRRHIKA ILFVRYFISS
301: IYFYYCTI
Best Arabidopsis Sequence Match ( AT3G48270.1 )
(BLAST)
001: MMIMFFLLCS IIFVVTIIIF RKQKRGKKRN TLPSPPGLPL IGNLHQLGRH PHRSLCSLSH RYGPLMLLHF GRVPVLVVSS AELARDVLKT HDRVFASRPR
101: SKIFEKLLYD KHDVASAPYG EYWRQMKSVC VLHLFSNKMV RSFREVREEE ISLMMEKIRK SISLPVNLSK ILVSLTNDVI CKVALGRKYG GETDFKELME
201: RLNKLLGTFS VGSYVPWLAW IDWIRGLDCQ LEKTANDVDK FFERVVQDHV DGNRDMTDFV DVLLAIQRDK TVGFEINRVS IKAIVMNVFV GGTDTSSTLM
301: EWAMTELLRH PKCLKRLQEE VRTICKDKSS VSEEEIQNMS YLKAVIKEAL RLHPPLPLMV PHESTQDVRL GDHHIPAGTQ VLINAWAIGR EAATWGPDVE
401: EFRPERHLDS SVDYRGQAFE LIPFGSGRRI CPAISFAVVL NEVVLANLVH RFDWRLSVES TEDQTEVAES TGIAIHRMFP LYAIASNTT
Arabidopsis Description
CYP71A26Cytochrome P450 71A26 [Source:UniProtKB/Swiss-Prot;Acc:Q9STK7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.