Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400000230 | |
| PGSC0003DMT400011903 | |
| PGSC0003DMT400011904 | |
| PGSC0003DMT400013490 | |
| PGSC0003DMT400013956 | |
| PGSC0003DMT400015793 | |
| PGSC0003DMT400018493 | endoplasmic reticulum |
| PGSC0003DMT400018494 | endoplasmic reticulum |
| PGSC0003DMT400018497 | endoplasmic reticulum |
| PGSC0003DMT400018498 | endoplasmic reticulum |
| PGSC0003DMT400019164 | |
| PGSC0003DMT400029745 | |
| PGSC0003DMT400032086 | |
| PGSC0003DMT400037158 | |
| PGSC0003DMT400038202 | endoplasmic reticulum |
| PGSC0003DMT400038205 | endoplasmic reticulum |
| PGSC0003DMT400047688 | |
| PGSC0003DMT400047969 | |
| PGSC0003DMT400048727 | |
| PGSC0003DMT400049928 | |
| PGSC0003DMT400060862 | |
| PGSC0003DMT400060959 | |
| PGSC0003DMT400072932 | |
| PGSC0003DMT400075164 | endoplasmic reticulum |
| PGSC0003DMT400078288 | endoplasmic reticulum |
| PGSC0003DMT400078290 | endoplasmic reticulum |
| PGSC0003DMT400093662 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018498 | Potato | endoplasmic reticulum, golgi | 66.97 | 96.13 |
| Solyc10g078220.1.1 | Tomato | endoplasmic reticulum | 94.38 | 83.0 |
| PGSC0003DMT400018494 | Potato | endoplasmic reticulum, extracellular | 88.54 | 77.41 |
| PGSC0003DMT400075164 | Potato | cytosol | 77.53 | 76.5 |
| PGSC0003DMT400038205 | Potato | extracellular, golgi | 73.71 | 64.69 |
| PGSC0003DMT400038202 | Potato | extracellular, golgi | 73.48 | 64.5 |
| PGSC0003DMT400018493 | Potato | endoplasmic reticulum, extracellular | 70.34 | 61.61 |
| Os10t0196100-00 | Rice | mitochondrion | 32.81 | 60.83 |
| VIT_08s0040g00780.t01 | Wine grape | extracellular, golgi | 64.72 | 56.69 |
| KRH66683 | Soybean | extracellular, golgi | 63.37 | 55.4 |
| KRG95042 | Soybean | mitochondrion | 63.15 | 55.21 |
| AT2G40890.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 62.02 | 54.33 |
| CDY35432 | Canola | endoplasmic reticulum, extracellular, vacuole | 61.8 | 54.13 |
| TraesCS4B01G393700.1 | Wheat | extracellular, golgi | 57.53 | 54.01 |
| Bra000211.1-P | Field mustard | endoplasmic reticulum, extracellular | 61.57 | 53.94 |
| CDY06955 | Canola | endoplasmic reticulum | 61.35 | 53.74 |
| CDY14751 | Canola | endoplasmic reticulum | 61.35 | 53.74 |
| CDX79965 | Canola | endoplasmic reticulum, extracellular, vacuole | 61.12 | 53.65 |
| Bra004591.1-P | Field mustard | endoplasmic reticulum, extracellular | 60.9 | 53.45 |
| TraesCSU01G032400.1 | Wheat | endoplasmic reticulum | 32.13 | 52.96 |
| CDY23876 | Canola | endoplasmic reticulum, extracellular | 60.22 | 52.86 |
| GSMUA_Achr8P24010_001 | Banana | endoplasmic reticulum, extracellular | 56.18 | 52.08 |
| EES18431 | Sorghum | endoplasmic reticulum | 59.78 | 51.95 |
| Bra016964.1-P | Field mustard | endoplasmic reticulum | 57.53 | 51.93 |
| Zm00001d038555_P001 | Maize | plasma membrane | 59.55 | 51.76 |
| TraesCS3B01G361900.1 | Wheat | endoplasmic reticulum | 58.88 | 51.47 |
| HORVU3Hr1G078660.1 | Barley | endoplasmic reticulum, extracellular | 58.65 | 51.28 |
| TraesCS1A01G310500.1 | Wheat | golgi | 58.43 | 50.78 |
| HORVU1Hr1G068030.1 | Barley | endoplasmic reticulum | 58.65 | 50.78 |
| TraesCS1B01G321800.1 | Wheat | endoplasmic reticulum | 58.2 | 50.59 |
| HORVU0Hr1G031710.1 | Barley | endoplasmic reticulum | 58.43 | 50.58 |
| CDY22488 | Canola | cytosol, mitochondrion | 40.22 | 50.56 |
| TraesCS3A01G331800.1 | Wheat | endoplasmic reticulum | 57.75 | 50.49 |
| TraesCS1D01G310000.1 | Wheat | endoplasmic reticulum | 57.98 | 50.39 |
| TraesCS3D01G325300.1 | Wheat | endoplasmic reticulum | 57.53 | 50.29 |
| TraesCS5A01G554000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 57.53 | 50.2 |
| Os05t0494000-01 | Rice | plasma membrane | 57.75 | 50.2 |
| Zm00001d043174_P001 | Maize | mitochondrion | 57.3 | 49.71 |
| EES03767 | Sorghum | endoplasmic reticulum, extracellular | 57.08 | 49.51 |
| PGSC0003DMT400008504 | Potato | cytosol | 22.7 | 48.56 |
| GSMUA_Achr4P10110_001 | Banana | endoplasmic reticulum, golgi | 39.78 | 46.21 |
| TraesCSU01G032500.1 | Wheat | cytosol, plasma membrane, plastid | 53.03 | 43.87 |
| PGSC0003DMT400019769 | Potato | cytosol | 16.4 | 32.3 |
| PGSC0003DMT400063351 | Potato | endoplasmic reticulum | 32.58 | 31.87 |
| PGSC0003DMT400058930 | Potato | endoplasmic reticulum, golgi | 34.83 | 30.45 |
| PGSC0003DMT400001124 | Potato | cytosol, endoplasmic reticulum, plastid | 30.34 | 30.2 |
| PGSC0003DMT400036189 | Potato | endoplasmic reticulum | 33.48 | 29.68 |
| PGSC0003DMT400012312 | Potato | extracellular, golgi | 23.37 | 29.55 |
| PGSC0003DMT400058927 | Potato | cytosol, endoplasmic reticulum, plastid | 26.74 | 29.53 |
| PGSC0003DMT400016302 | Potato | cytosol, extracellular | 27.87 | 29.25 |
| PGSC0003DMT400002923 | Potato | endoplasmic reticulum, golgi | 33.03 | 29.17 |
| PGSC0003DMT400065984 | Potato | endoplasmic reticulum, golgi | 29.89 | 29.17 |
| PGSC0003DMT400016296 | Potato | golgi | 33.03 | 29.05 |
| PGSC0003DMT400033701 | Potato | endoplasmic reticulum, extracellular | 31.69 | 28.6 |
| PGSC0003DMT400046535 | Potato | golgi | 32.36 | 28.29 |
| PGSC0003DMT400050783 | Potato | cytosol, golgi, plastid | 29.89 | 28.24 |
| PGSC0003DMT400019779 | Potato | cytosol, golgi, plastid | 29.89 | 28.24 |
| PGSC0003DMT400019773 | Potato | mitochondrion | 24.27 | 28.2 |
| PGSC0003DMT400083869 | Potato | cytosol | 22.25 | 28.05 |
| PGSC0003DMT400033313 | Potato | endoplasmic reticulum, extracellular | 31.24 | 28.02 |
| PGSC0003DMT400075101 | Potato | cytosol | 27.19 | 27.82 |
| PGSC0003DMT400014232 | Potato | endoplasmic reticulum, golgi | 31.69 | 27.7 |
| PGSC0003DMT400033335 | Potato | endoplasmic reticulum | 30.79 | 27.57 |
| PGSC0003DMT400024894 | Potato | endoplasmic reticulum, extracellular | 31.01 | 27.22 |
| PGSC0003DMT400033311 | Potato | endoplasmic reticulum, extracellular | 30.11 | 27.13 |
| PGSC0003DMT400036391 | Potato | endoplasmic reticulum, extracellular | 30.34 | 27.11 |
| PGSC0003DMT400048583 | Potato | endoplasmic reticulum | 33.26 | 26.86 |
| PGSC0003DMT400016263 | Potato | extracellular | 30.11 | 26.85 |
| PGSC0003DMT400061231 | Potato | extracellular, golgi, plasma membrane | 29.66 | 26.45 |
| PGSC0003DMT400037425 | Potato | endoplasmic reticulum, extracellular | 29.21 | 26.37 |
| PGSC0003DMT400016243 | Potato | endoplasmic reticulum, extracellular | 14.16 | 26.14 |
| PGSC0003DMT400036399 | Potato | endoplasmic reticulum, extracellular | 28.76 | 26.02 |
| PGSC0003DMT400025446 | Potato | extracellular, golgi | 29.44 | 25.99 |
| PGSC0003DMT400001740 | Potato | mitochondrion | 26.07 | 25.49 |
| PGSC0003DMT400036390 | Potato | endoplasmic reticulum, extracellular | 12.58 | 24.89 |
| PGSC0003DMT400065985 | Potato | extracellular, golgi | 15.51 | 22.77 |
| PGSC0003DMT400036397 | Potato | mitochondrion | 15.28 | 22.08 |
| PGSC0003DMT400025448 | Potato | cytosol | 11.69 | 21.4 |
| PGSC0003DMT400004816 | Potato | extracellular, golgi | 30.56 | 20.09 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:21.6.1.2 | ncoils:Coil | InterPro:Cyt_P450 | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016705 | GO:GO:0020037 | GO:GO:0055114 | InterPro:IPR036396 | UniProt:M1AAR3 | PFAM:PF00067 |
| EnsemblPlantsGene:PGSC0003DMG400007180 | PGSC:PGSC0003DMG400007180 | EnsemblPlants:PGSC0003DMT400018497 | PRINTS:PR00385 | PRINTS:PR00463 | PANTHER:PTHR24298 |
| PANTHER:PTHR24298:SF0 | SUPFAM:SSF48264 | UniParc:UPI0002953F75 | SEG:seg | : | : |
Description
P-coumaroyl quinate/shikimate 3'-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400007180]
Coordinates
chr10:+:59481982..59484716
Molecular Weight (calculated)
51444.2 Da
IEP (calculated)
7.015
GRAVY (calculated)
-0.256
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFPLVLSLS VFIIFLCYKL YNRLTAKLPP GPWPWPVIGN LFSITPMRFR CFAEWAQIYG PIFSFYLGSQ LNVVVNNAEL AKEVLKDNDQ NLANRFRTKP
101: LDSVSKNGMD LIWADYGPHY VKVRKLCNLE LFTQKRLEAL RPIREVEVTA MVENIFKDTT KPGNDSETMT LRGYLGLVSF NNITRLTFGK RFINSKGEVD
201: EQGEELKAIV TDGIRISGKP NLGEFVPWLR WVFKDDNEAL ESQDRRLNKF TRLIMEEHTI AREKSGETKH HFVDALLTLQ KEYDLSDDSI ISLFWDMVQA
301: GTDTVAITVE WAMAELVRNP RVQQKVQEEL DRVIGSDRIV NETDISNLSY LQHVVKESLR LHPPTPLMLP HMAGNDVKVG GYKIPKDSIV HVNVWALGRD
401: PKIWKEPLQF WPERFMEEDV DMKGHDYKFL PFGAGRRMVF AIWCW
101: LDSVSKNGMD LIWADYGPHY VKVRKLCNLE LFTQKRLEAL RPIREVEVTA MVENIFKDTT KPGNDSETMT LRGYLGLVSF NNITRLTFGK RFINSKGEVD
201: EQGEELKAIV TDGIRISGKP NLGEFVPWLR WVFKDDNEAL ESQDRRLNKF TRLIMEEHTI AREKSGETKH HFVDALLTLQ KEYDLSDDSI ISLFWDMVQA
301: GTDTVAITVE WAMAELVRNP RVQQKVQEEL DRVIGSDRIV NETDISNLSY LQHVVKESLR LHPPTPLMLP HMAGNDVKVG GYKIPKDSIV HVNVWALGRD
401: PKIWKEPLQF WPERFMEEDV DMKGHDYKFL PFGAGRRMVF AIWCW
001: MIIYLISLLP IIVATLMLYQ RWWRSNIPPG PKPKFLLGNL HQMKPLWTHS FSEWSETYGP IISVWIGSQL TVVVSSSDLA RQVLRDKDHQ LSNRHRIARM
101: TQTGTDLVWS DYSPHYVKLR KLCTLELFSL KSIENFRSLR EMEARSMVVS ILKDLMSNSG DDQERKPVIV RKYLAAVVLN TISRLMIGKE FGSEEGKEFK
201: AIVEKEHLLS GSGTILDHVW WLKWVSSWFF SDKEFLAHKD RRTKWFRGAI MVEEDIEIED HRGFVRKLLV LKEQKELSEE TVGGLVWNML TAGADTTAVV
301: IEWAMAEMIK CPTVQEKAQQ ELDSVVGSER LMTESDIPIL PYLQCVVKEA LRLHPSTPLM LPHKASETVW VGGYKVPKGA TVYVNVQAIG RDPANWINPY
401: EFRPERFLQE ETDVKGRDFR VLPFGSGRRM CPAAQLSMNL MTLVMGNLLH CFSWSSPVPG ERIDMSENPG LLCNMRTPLQ ALALPRAAAR AIPLPLD
101: TQTGTDLVWS DYSPHYVKLR KLCTLELFSL KSIENFRSLR EMEARSMVVS ILKDLMSNSG DDQERKPVIV RKYLAAVVLN TISRLMIGKE FGSEEGKEFK
201: AIVEKEHLLS GSGTILDHVW WLKWVSSWFF SDKEFLAHKD RRTKWFRGAI MVEEDIEIED HRGFVRKLLV LKEQKELSEE TVGGLVWNML TAGADTTAVV
301: IEWAMAEMIK CPTVQEKAQQ ELDSVVGSER LMTESDIPIL PYLQCVVKEA LRLHPSTPLM LPHKASETVW VGGYKVPKGA TVYVNVQAIG RDPANWINPY
401: EFRPERFLQE ETDVKGRDFR VLPFGSGRRM CPAAQLSMNL MTLVMGNLLH CFSWSSPVPG ERIDMSENPG LLCNMRTPLQ ALALPRAAAR AIPLPLD
Arabidopsis Description
CYP98A8Cytochrome P450 98A8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA61]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.