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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX71001
CDX79965 endoplasmic reticulum
CDX79993
CDX81995
CDX83400
CDX84829 endoplasmic reticulum
CDX84830 endoplasmic reticulum
CDX88793
CDX92349
CDX95631
CDX96233
CDX97826 endoplasmic reticulum
CDX97827 endoplasmic reticulum
CDY00522
CDY02068 endoplasmic reticulum
CDY04155
CDY05880
CDY06955 endoplasmic reticulum
CDY08353
CDY09141
CDY10741 endoplasmic reticulum
CDY13846
CDY14370
CDY14751 endoplasmic reticulum
CDY20247
CDY21085
CDY22488 endoplasmic reticulum
CDY23876 endoplasmic reticulum
CDY23995 endoplasmic reticulum
CDY23996 endoplasmic reticulum
CDY25557
CDY26931
CDY27392
CDY28830
CDY29670 endoplasmic reticulum
CDY29671 endoplasmic reticulum
CDY34396
CDY34589
CDY35432 endoplasmic reticulum
CDY35686
CDY37029
CDY38194
CDY42012
CDY45557
CDY51340
CDY56247
CDY57247
CDY61583
CDY65417
CDY68104
CDY71101
CDY71885

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40890.1 CDY51340 AT1G20330.1 23175744
AT2G40890.1 CDY71885 AT1G20330.1 23175744
AT2G40890.1 CDY08353 AT1G64090.2 23175744
AT2G40890.1 CDY25557 AT1G64090.2 23175744
AT2G40890.1 CDY34396 AT1G64090.2 23175744
AT2G40890.1 CDY38194 AT1G64090.2 23175744
AT2G40890.1 CDY04155 AT2G03510.1 23175744
AT2G40890.1 CDY45557 AT2G03510.1 23175744
AT2G40890.1 CDY65417 AT2G03510.1 23175744
AT2G40890.1 CDX81995 AT2G20990.3 23175744
AT2G40890.1 CDY13846 AT2G20990.3 23175744
AT2G40890.1 CDX84829 AT2G30490.1 23175744
AT2G40890.1 CDX84830 AT2G30490.1 23175744
AT2G40890.1 CDX97826 AT2G30490.1 23175744
AT2G40890.1 CDX97827 AT2G30490.1 23175744
AT2G40890.1 CDY02068 AT2G30490.1 23175744
AT2G40890.1 CDY10741 AT2G30490.1 23175744
AT2G40890.1 CDY23995 AT2G30490.1 23175744
AT2G40890.1 CDY23996 AT2G30490.1 23175744
AT2G40890.1 CDY29670 AT2G30490.1 23175744
AT2G40890.1 CDY29671 AT2G30490.1 23175744
AT2G40890.1 CDX84829 AT2G30490.1 23175744
AT2G40890.1 CDX84830 AT2G30490.1 23175744
AT2G40890.1 CDX97826 AT2G30490.1 23175744
AT2G40890.1 CDX97827 AT2G30490.1 23175744
AT2G40890.1 CDY02068 AT2G30490.1 23175744
AT2G40890.1 CDY10741 AT2G30490.1 23175744
AT2G40890.1 CDY23995 AT2G30490.1 23175744
AT2G40890.1 CDY23996 AT2G30490.1 23175744
AT2G40890.1 CDY29670 AT2G30490.1 23175744
AT2G40890.1 CDY29671 AT2G30490.1 23175744
AT2G40890.1 CDX79965 AT2G40890.1 23175744
AT2G40890.1 CDY06955 AT2G40890.1 23175744
AT2G40890.1 CDY14751 AT2G40890.1 23175744
AT2G40890.1 CDY22488 AT2G40890.1 23175744
AT2G40890.1 CDY23876 AT2G40890.1 23175744
AT2G40890.1 CDY35432 AT2G40890.1 23175744
AT2G40890.1 CDX83400 AT2G45140.1 23175744
AT2G40890.1 CDX95631 AT2G45140.1 23175744
AT2G40890.1 CDY27392 AT2G45140.1 23175744
AT2G40890.1 CDY37029 AT2G45140.1 23175744
AT2G40890.1 CDY56247 AT2G45140.1 23175744
AT2G40890.1 CDY57247 AT2G45140.1 23175744
AT2G40890.1 CDX79993 AT2G46170.1 23175744
AT2G40890.1 CDY42012 AT2G46170.1 23175744
AT2G40890.1 CDY21085 AT3G26830.1 23175744
AT2G40890.1 CDY34589 AT3G26830.1 23175744
AT2G40890.1 CDY05880 AT3G48890.1 23175744
AT2G40890.1 CDY71101 AT3G48890.1 23175744
AT2G40890.1 CDX71001 AT5G22460.1 23175744
AT2G40890.1 CDX88793 AT5G22460.1 23175744
AT2G40890.1 CDX92349 AT5G22460.1 23175744
AT2G40890.1 CDY09141 AT5G22460.1 23175744
AT2G40890.1 CDY26931 AT5G22460.1 23175744
AT2G40890.1 CDY35686 AT5G22460.1 23175744
AT2G40890.1 CDY68104 AT5G22460.1 23175744
AT2G40890.1 CDY00522 AT5G52240.1 23175744
AT2G40890.1 CDY61583 AT5G52240.1 23175744
AT2G40890.1 CDX96233 AT5G53560.1 23175744
AT2G40890.1 CDY14370 AT5G53560.1 23175744
AT2G40890.1 CDY20247 AT5G53560.1 23175744
AT2G40890.1 CDY28830 AT5G53560.1 23175744
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004591.1-P Field mustard endoplasmic reticulum, extracellular 97.63 97.63
CDY23876 Canola endoplasmic reticulum, extracellular 95.07 95.07
CDY14751 Canola endoplasmic reticulum 89.94 89.76
CDY35432 Canola endoplasmic reticulum, extracellular, vacuole 89.74 89.57
AT2G40890.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 89.55 89.37
CDY06955 Canola endoplasmic reticulum 89.55 89.37
CDY22488 Canola cytosol, mitochondrion 60.35 86.44
VIT_08s0040g00780.t01 Wine grape extracellular, golgi 75.94 75.79
KRH66683 Soybean extracellular, golgi 75.94 75.64
KRG95042 Soybean mitochondrion 75.54 75.25
Solyc10g078240.1.1 Tomato endoplasmic reticulum, extracellular 70.22 69.94
PGSC0003DMT400018493 Potato endoplasmic reticulum, extracellular 69.43 69.29
GSMUA_Achr8P24010_001 Banana endoplasmic reticulum, extracellular 65.09 68.75
EES18431 Sorghum endoplasmic reticulum 66.67 66.02
Zm00001d043174_P001 Maize mitochondrion 66.67 65.89
Zm00001d038555_P001 Maize plasma membrane 66.27 65.62
TraesCS1B01G321800.1 Wheat endoplasmic reticulum 66.27 65.62
TraesCS1A01G310500.1 Wheat golgi 66.27 65.62
EES03767 Sorghum endoplasmic reticulum, extracellular 66.27 65.5
TraesCS1D01G310000.1 Wheat endoplasmic reticulum 66.08 65.43
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 65.48 65.23
HORVU0Hr1G031710.1 Barley endoplasmic reticulum 66.08 65.18
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 66.08 65.18
PGSC0003DMT400075164 Potato cytosol 57.79 64.97
TraesCS3D01G325300.1 Wheat endoplasmic reticulum 65.09 64.83
TraesCS3B01G361900.1 Wheat endoplasmic reticulum 65.09 64.83
Os10t0196100-00 Rice mitochondrion 30.57 64.58
Os05t0494000-01 Rice plasma membrane 64.89 64.26
TraesCS3A01G331800.1 Wheat endoplasmic reticulum 64.5 64.24
TraesCS5A01G554000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 63.71 63.33
PGSC0003DMT400038205 Potato extracellular, golgi 63.12 63.12
PGSC0003DMT400018494 Potato endoplasmic reticulum, extracellular 63.31 63.06
PGSC0003DMT400038202 Potato extracellular, golgi 62.72 62.72
Solyc01g009370.1.1 Tomato extracellular, golgi 62.33 62.33
Solyc10g078230.1.1 Tomato endoplasmic reticulum, extracellular 62.13 61.89
PGSC0003DMT400018497 Potato endoplasmic reticulum, golgi 53.65 61.12
Solyc10g078220.1.1 Tomato endoplasmic reticulum 60.95 61.07
TraesCS4B01G393700.1 Wheat extracellular, golgi 55.03 58.86
TraesCSU01G032400.1 Wheat endoplasmic reticulum 31.16 58.52
TraesCSU01G032500.1 Wheat cytosol, plasma membrane, plastid 60.35 56.88
PGSC0003DMT400018498 Potato endoplasmic reticulum, golgi 33.14 54.19
GSMUA_Achr4P10110_001 Banana endoplasmic reticulum, golgi 39.45 52.22
CDX85843 Canola endoplasmic reticulum 46.94 47.79
CDX68176 Canola endoplasmic reticulum 46.94 47.79
CDY15188 Canola cytosol 32.54 35.95
CDX90022 Canola cytosol 32.54 35.41
CDX69984 Canola extracellular, golgi 35.11 34.83
CDY38002 Canola cytosol 27.22 32.94
CDX99037 Canola endoplasmic reticulum, extracellular 35.31 24.97
Protein Annotations
Gene3D:1.10.630.10MapMan:21.6.1.2GO:A0A078CT00EnsemblPlants:CDX79965ProteinID:CDX79965ProteinID:CDX79965.1
InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705GO:GO:0020037
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00132827001InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF0SUPFAM:SSF48264UniParc:UPI0004EEE458SEG:seg
Description
BnaA05g01910D
Coordinates
chrLK031819:+:1084761..1087392
Molecular Weight (calculated)
57470.1 Da
IEP (calculated)
8.465
GRAVY (calculated)
-0.119
Length
507 amino acids
Sequence
(BLAST)
001: MSWFLITAAI AAVVSYKLIQ RLRFKLPPGP LPKPIIGNIC DIKPVRFICY YEWAQTYGPI ISVWIGSILN VVVSSAELAK EVLKDHDQKL ADRHRNRSTE
101: AFSRNGQDLI WADYGPHYVK VRKVCMLELF TPKRLESLRP IREDEVTAMV ESVFRDCKLP ENITKGIQLR KYLGAVAFNN ITRLVFGKRF VDADGVIDEQ
201: GLEFHAIVSN GLKLGASLSI AEHIPWLRWM CPADEKAFAE HGARRDLLTR AIMEEHTLAR QKFSGPKQHF VGALLTLKDQ YDLSEDTIIG LLWDMITAGM
301: DTAAITTEWA MAEMIKNPRV QQKVQEELDR VIGLDRVLTE PDFTRLPYLK CVVKESFRLH PPTPLMVPHR ARADVKIGGY TIPKGSNVHV NVWAVGRDPA
401: VWKDPLEFRP ERFLEEDVDM KGHDFRLLPF GAGRRVCPGA QLGISLVTSM LSHLLHHFVW TLPQGTNTDE IDMSGNPGIV TFMRTPVQAV ATPRLASDLY
501: KRVPFDM
Best Arabidopsis Sequence Match ( AT2G40890.1 )
(BLAST)
001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
Arabidopsis Description
CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.