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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX71001
CDX79965 endoplasmic reticulum
CDX79993
CDX81995
CDX83400
CDX84829 endoplasmic reticulum
CDX84830 endoplasmic reticulum
CDX88793
CDX92349
CDX95631
CDX96233
CDX97826 endoplasmic reticulum
CDX97827 endoplasmic reticulum
CDY00522
CDY02068 endoplasmic reticulum
CDY04155
CDY05880
CDY06955 endoplasmic reticulum
CDY08353
CDY09141
CDY10741 endoplasmic reticulum
CDY13846
CDY14370
CDY14751 endoplasmic reticulum
CDY20247
CDY21085
CDY22488 endoplasmic reticulum
CDY23876 endoplasmic reticulum
CDY23995 endoplasmic reticulum
CDY23996 endoplasmic reticulum
CDY25557
CDY26931
CDY27392
CDY28830
CDY29670 endoplasmic reticulum
CDY29671 endoplasmic reticulum
CDY34396
CDY34589
CDY35432 endoplasmic reticulum
CDY35686
CDY37029
CDY38194
CDY42012
CDY45557
CDY51340
CDY56247
CDY57247
CDY61583
CDY65417
CDY68104
CDY71101
CDY71885

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40890.1 CDY51340 AT1G20330.1 23175744
AT2G40890.1 CDY71885 AT1G20330.1 23175744
AT2G40890.1 CDY08353 AT1G64090.2 23175744
AT2G40890.1 CDY25557 AT1G64090.2 23175744
AT2G40890.1 CDY34396 AT1G64090.2 23175744
AT2G40890.1 CDY38194 AT1G64090.2 23175744
AT2G40890.1 CDY04155 AT2G03510.1 23175744
AT2G40890.1 CDY45557 AT2G03510.1 23175744
AT2G40890.1 CDY65417 AT2G03510.1 23175744
AT2G40890.1 CDX81995 AT2G20990.3 23175744
AT2G40890.1 CDY13846 AT2G20990.3 23175744
AT2G40890.1 CDX84829 AT2G30490.1 23175744
AT2G40890.1 CDX84830 AT2G30490.1 23175744
AT2G40890.1 CDX97826 AT2G30490.1 23175744
AT2G40890.1 CDX97827 AT2G30490.1 23175744
AT2G40890.1 CDY02068 AT2G30490.1 23175744
AT2G40890.1 CDY10741 AT2G30490.1 23175744
AT2G40890.1 CDY23995 AT2G30490.1 23175744
AT2G40890.1 CDY23996 AT2G30490.1 23175744
AT2G40890.1 CDY29670 AT2G30490.1 23175744
AT2G40890.1 CDY29671 AT2G30490.1 23175744
AT2G40890.1 CDX84829 AT2G30490.1 23175744
AT2G40890.1 CDX84830 AT2G30490.1 23175744
AT2G40890.1 CDX97826 AT2G30490.1 23175744
AT2G40890.1 CDX97827 AT2G30490.1 23175744
AT2G40890.1 CDY02068 AT2G30490.1 23175744
AT2G40890.1 CDY10741 AT2G30490.1 23175744
AT2G40890.1 CDY23995 AT2G30490.1 23175744
AT2G40890.1 CDY23996 AT2G30490.1 23175744
AT2G40890.1 CDY29670 AT2G30490.1 23175744
AT2G40890.1 CDY29671 AT2G30490.1 23175744
AT2G40890.1 CDX79965 AT2G40890.1 23175744
AT2G40890.1 CDY06955 AT2G40890.1 23175744
AT2G40890.1 CDY14751 AT2G40890.1 23175744
AT2G40890.1 CDY22488 AT2G40890.1 23175744
AT2G40890.1 CDY23876 AT2G40890.1 23175744
AT2G40890.1 CDY35432 AT2G40890.1 23175744
AT2G40890.1 CDX83400 AT2G45140.1 23175744
AT2G40890.1 CDX95631 AT2G45140.1 23175744
AT2G40890.1 CDY27392 AT2G45140.1 23175744
AT2G40890.1 CDY37029 AT2G45140.1 23175744
AT2G40890.1 CDY56247 AT2G45140.1 23175744
AT2G40890.1 CDY57247 AT2G45140.1 23175744
AT2G40890.1 CDX79993 AT2G46170.1 23175744
AT2G40890.1 CDY42012 AT2G46170.1 23175744
AT2G40890.1 CDY21085 AT3G26830.1 23175744
AT2G40890.1 CDY34589 AT3G26830.1 23175744
AT2G40890.1 CDY05880 AT3G48890.1 23175744
AT2G40890.1 CDY71101 AT3G48890.1 23175744
AT2G40890.1 CDX71001 AT5G22460.1 23175744
AT2G40890.1 CDX88793 AT5G22460.1 23175744
AT2G40890.1 CDX92349 AT5G22460.1 23175744
AT2G40890.1 CDY09141 AT5G22460.1 23175744
AT2G40890.1 CDY26931 AT5G22460.1 23175744
AT2G40890.1 CDY35686 AT5G22460.1 23175744
AT2G40890.1 CDY68104 AT5G22460.1 23175744
AT2G40890.1 CDY00522 AT5G52240.1 23175744
AT2G40890.1 CDY61583 AT5G52240.1 23175744
AT2G40890.1 CDX96233 AT5G53560.1 23175744
AT2G40890.1 CDY14370 AT5G53560.1 23175744
AT2G40890.1 CDY20247 AT5G53560.1 23175744
AT2G40890.1 CDY28830 AT5G53560.1 23175744
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35432 Canola endoplasmic reticulum, extracellular, vacuole 96.61 67.32
Os10t0196100-00 Rice mitochondrion 44.92 66.25
AT2G40890.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 94.35 65.75
CDY14751 Canola endoplasmic reticulum 93.79 65.35
CDY06955 Canola endoplasmic reticulum 92.94 64.76
CDX79965 Canola endoplasmic reticulum, extracellular, vacuole 86.44 60.35
CDY23876 Canola endoplasmic reticulum, extracellular 84.46 58.97
KRH66683 Soybean extracellular, golgi 81.64 56.78
KRG95042 Soybean mitochondrion 81.64 56.78
VIT_08s0040g00780.t01 Wine grape extracellular, golgi 79.66 55.51
GSMUA_Achr8P24010_001 Banana endoplasmic reticulum, extracellular 71.47 52.71
Solyc10g078240.1.1 Tomato endoplasmic reticulum, extracellular 72.32 50.29
PGSC0003DMT400018493 Potato endoplasmic reticulum, extracellular 71.75 50.0
PGSC0003DMT400075164 Potato cytosol 62.71 49.22
EES03767 Sorghum endoplasmic reticulum, extracellular 68.64 47.37
Zm00001d043174_P001 Maize mitochondrion 68.36 47.17
TraesCS3B01G361900.1 Wheat endoplasmic reticulum 67.23 46.76
EES18431 Sorghum endoplasmic reticulum 67.51 46.68
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 66.95 46.56
TraesCS3D01G325300.1 Wheat endoplasmic reticulum 66.67 46.37
TraesCS3A01G331800.1 Wheat endoplasmic reticulum 66.67 46.37
Zm00001d038555_P001 Maize plasma membrane 66.95 46.29
PGSC0003DMT400038205 Potato extracellular, golgi 65.54 45.76
HORVU0Hr1G031710.1 Barley endoplasmic reticulum 66.1 45.53
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 66.1 45.53
TraesCS1A01G310500.1 Wheat golgi 65.82 45.51
TraesCS1B01G321800.1 Wheat endoplasmic reticulum 65.82 45.51
TraesCS1D01G310000.1 Wheat endoplasmic reticulum 65.82 45.51
PGSC0003DMT400038202 Potato extracellular, golgi 64.97 45.36
Solyc01g009370.1.1 Tomato extracellular, golgi 64.97 45.36
Os05t0494000-01 Rice plasma membrane 64.12 44.34
PGSC0003DMT400018494 Potato endoplasmic reticulum, extracellular 63.28 44.01
TraesCS5A01G554000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 63.28 43.92
Solyc10g078230.1.1 Tomato endoplasmic reticulum, extracellular 62.71 43.61
Solyc10g078220.1.1 Tomato endoplasmic reticulum 62.15 43.48
PGSC0003DMT400018497 Potato endoplasmic reticulum, golgi 50.56 40.22
TraesCS4B01G393700.1 Wheat extracellular, golgi 52.26 39.03
TraesCSU01G032500.1 Wheat cytosol, plasma membrane, plastid 58.47 38.48
CDX68176 Canola endoplasmic reticulum 47.18 33.53
CDX85843 Canola endoplasmic reticulum 46.89 33.33
CDY15188 Canola cytosol 37.57 28.98
CDX90022 Canola cytosol 37.85 28.76
GSMUA_Achr4P10110_001 Banana endoplasmic reticulum, golgi 30.51 28.2
CDY38002 Canola cytosol 31.07 26.25
CDX69984 Canola extracellular, golgi 36.72 25.44
PGSC0003DMT400018498 Potato endoplasmic reticulum, golgi 21.47 24.52
TraesCSU01G032400.1 Wheat endoplasmic reticulum 16.38 21.48
CDX99037 Canola endoplasmic reticulum, extracellular 37.01 18.27
Protein Annotations
Gene3D:1.10.630.10MapMan:21.6.1.2GO:A0A078GCU5UniProt:A0A078GCU5EnsemblPlants:CDY22488ProteinID:CDY22488
ProteinID:CDY22488.1InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00019050001
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF0SUPFAM:SSF48264UniParc:UPI0004EE470A:::
Description
BnaC03g22980DBnaC03g22980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCU5]
Coordinates
chrLK032132:-:126319..135765
Molecular Weight (calculated)
40144.8 Da
IEP (calculated)
9.617
GRAVY (calculated)
-0.316
Length
354 amino acids
Sequence
(BLAST)
001: MGKKKNKENR VKGLQLRKYL GAVAFNNITR LAFGKRFVNA EGVMDEQGLE FKAIVSNGLK IGASLSIAEH IPWLRWMFPA DEKAFAKHGA RRDILTRAIM
101: EEHTLARQKS SGAKQHFVDA LLTLKDQYDL SEDTIIGLLW DMITAGMDTT AITAEWAMAE MIKNPRVQQK VQEEFDRVVG LDRILTEPDF SRLPYLQCVV
201: KESFRLHPPT PLMLPHRSNA HVKIGGYDIP KGSNVHVNVW AVARDPAVWK NPLEFRPERF LEEDVDMKGH DFRLLPFGAG RRVCPGAQLG INLVTSMMSH
301: LLHHFVWTPP QGTKADEIDM SENPGLVTYM RVPVQAVATP RLPSDLYKRV PYEK
Best Arabidopsis Sequence Match ( AT1G74540.1 )
(BLAST)
001: MIIYLISLLP IIVATLMLYQ RWWRSNIPPG PKPKFLLGNL HQMKPLWTHS FSEWSETYGP IISVWIGSQL TVVVSSSDLA RQVLRDKDHQ LSNRHRIARM
101: TQTGTDLVWS DYSPHYVKLR KLCTLELFSL KSIENFRSLR EMEARSMVVS ILKDLMSNSG DDQERKPVIV RKYLAAVVLN TISRLMIGKE FGSEEGKEFK
201: AIVEKEHLLS GSGTILDHVW WLKWVSSWFF SDKEFLAHKD RRTKWFRGAI MVEEDIEIED HRGFVRKLLV LKEQKELSEE TVGGLVWNML TAGADTTAVV
301: IEWAMAEMIK CPTVQEKAQQ ELDSVVGSER LMTESDIPIL PYLQCVVKEA LRLHPSTPLM LPHKASETVW VGGYKVPKGA TVYVNVQAIG RDPANWINPY
401: EFRPERFLQE ETDVKGRDFR VLPFGSGRRM CPAAQLSMNL MTLVMGNLLH CFSWSSPVPG ERIDMSENPG LLCNMRTPLQ ALALPRAAAR AIPLPLD
Arabidopsis Description
CYP98A8Cytochrome P450 98A8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA61]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.