Factsheet for GSMUA_Achr4P10110_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 1
mitochondrion 2
extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P04070_001
GSMUA_Achr1P20280_001
GSMUA_Achr1P26490_001
GSMUA_Achr3P15760_001
GSMUA_Achr3P31920_001
GSMUA_Achr4P08400_001
GSMUA_Achr4P10110_001	endoplasmic reticulum
GSMUA_Achr4P14350_001
GSMUA_Achr4P25540_001
GSMUA_Achr4P25570_001
GSMUA_Achr4P27140_001
GSMUA_Achr4P29480_001
GSMUA_Achr4P30410_001
GSMUA_Achr5P06850_001
GSMUA_Achr5P12190_001
GSMUA_Achr5P20880_001
GSMUA_Achr6P31860_001
GSMUA_Achr8P11120_001
GSMUA_Achr8P24010_001	endoplasmic reticulum
GSMUA_Achr8P27830_001
GSMUA_Achr9P05440_001
GSMUA_Achr9P12510_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40890.1	GSMUA_Achr4P25540_001	AT1G20330.1	23175744
AT2G40890.1	GSMUA_Achr4P29480_001	AT1G20330.1	23175744
AT2G40890.1	GSMUA_Achr9P12510_001	AT1G51570.1	23175744
AT2G40890.1	GSMUA_Achr10P...	AT1G64090.2	23175744
AT2G40890.1	GSMUA_Achr3P15760_001	AT1G64090.2	23175744
AT2G40890.1	GSMUA_Achr3P31920_001	AT1G64090.2	23175744
AT2G40890.1	GSMUA_Achr4P08400_001	AT1G64090.2	23175744
AT2G40890.1	GSMUA_Achr5P06850_001	AT1G64090.2	23175744
AT2G40890.1	GSMUA_Achr6P31860_001	AT1G64090.2	23175744
AT2G40890.1	GSMUA_Achr8P27830_001	AT1G64090.2	23175744
AT2G40890.1	GSMUA_Achr9P05440_001	AT1G64090.2	23175744
AT2G40890.1	GSMUA_AchrUn_...	AT1G64090.2	23175744
AT2G40890.1	GSMUA_Achr4P14350_001	AT2G03510.1	23175744
AT2G40890.1	GSMUA_Achr1P26490_001	AT2G20990.3	23175744
AT2G40890.1	GSMUA_Achr4P25570_001	AT2G20990.3	23175744
AT2G40890.1	GSMUA_AchrUn_...	AT2G20990.3	23175744
AT2G40890.1	GSMUA_AchrUn_...	AT2G20990.3	23175744
AT2G40890.1	GSMUA_Achr4P10110_001	AT2G40890.1	23175744
AT2G40890.1	GSMUA_Achr8P24010_001	AT2G40890.1	23175744
AT2G40890.1	GSMUA_Achr11P...	AT2G45140.1	23175744
AT2G40890.1	GSMUA_Achr11P...	AT2G45140.1	23175744
AT2G40890.1	GSMUA_Achr1P20280_001	AT2G45140.1	23175744
AT2G40890.1	GSMUA_Achr5P20880_001	AT2G45140.1	23175744
AT2G40890.1	GSMUA_Achr8P11120_001	AT2G45140.1	23175744
AT2G40890.1	GSMUA_Achr10P...	AT2G46170.1	23175744
AT2G40890.1	GSMUA_Achr3P15760_001	AT2G46170.1	23175744
AT2G40890.1	GSMUA_Achr3P31920_001	AT2G46170.1	23175744
AT2G40890.1	GSMUA_Achr4P08400_001	AT2G46170.1	23175744
AT2G40890.1	GSMUA_Achr5P06850_001	AT2G46170.1	23175744
AT2G40890.1	GSMUA_Achr6P31860_001	AT2G46170.1	23175744
AT2G40890.1	GSMUA_Achr8P27830_001	AT2G46170.1	23175744
AT2G40890.1	GSMUA_Achr9P05440_001	AT2G46170.1	23175744
AT2G40890.1	GSMUA_AchrUn_...	AT2G46170.1	23175744
AT2G40890.1	GSMUA_Achr10P...	AT5G41600.1	23175744
AT2G40890.1	GSMUA_Achr3P15760_001	AT5G41600.1	23175744
AT2G40890.1	GSMUA_Achr3P31920_001	AT5G41600.1	23175744
AT2G40890.1	GSMUA_Achr4P08400_001	AT5G41600.1	23175744
AT2G40890.1	GSMUA_Achr5P06850_001	AT5G41600.1	23175744
AT2G40890.1	GSMUA_Achr6P31860_001	AT5G41600.1	23175744
AT2G40890.1	GSMUA_Achr8P27830_001	AT5G41600.1	23175744
AT2G40890.1	GSMUA_Achr9P05440_001	AT5G41600.1	23175744
AT2G40890.1	GSMUA_AchrUn_...	AT5G41600.1	23175744
AT2G40890.1	GSMUA_Achr11P...	AT5G52240.1	23175744
AT2G40890.1	GSMUA_Achr11P...	AT5G52240.1	23175744
AT2G40890.1	GSMUA_Achr5P12190_001	AT5G52240.1	23175744
AT2G40890.1	GSMUA_Achr11P...	AT5G53560.1	23175744
AT2G40890.1	GSMUA_Achr1P04070_001	AT5G53560.1	23175744
AT2G40890.1	GSMUA_Achr4P27140_001	AT5G53560.1	23175744
AT2G40890.1	GSMUA_Achr4P30410_001	AT5G53560.1	23175744

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P24010_001	Banana	endoplasmic reticulum, extracellular	57.44	45.83
TraesCSU01G032400.1	Wheat	endoplasmic reticulum	31.33	44.44
TraesCS4B01G393700.1	Wheat	extracellular, golgi	51.96	41.98
VIT_08s0040g00780.t01	Wine grape	extracellular, golgi	55.61	41.93
HORVU0Hr1G031710.1	Barley	endoplasmic reticulum	55.61	41.44
HORVU1Hr1G068030.1	Barley	endoplasmic reticulum	55.35	41.25
TraesCS1A01G310500.1	Wheat	golgi	55.09	41.21
TraesCS1D01G310000.1	Wheat	endoplasmic reticulum	55.09	41.21
Zm00001d038555_P001	Maize	plasma membrane	55.09	41.21
TraesCS1B01G321800.1	Wheat	endoplasmic reticulum	54.83	41.02
EES18431	Sorghum	endoplasmic reticulum	54.83	41.02
Os05t0494000-01	Rice	plasma membrane	54.83	41.02
CDY06955	Canola	endoplasmic reticulum	54.05	40.75
Zm00001d043174_P001	Maize	mitochondrion	54.57	40.74
EES03767	Sorghum	endoplasmic reticulum, extracellular	54.31	40.55
KRH66683	Soybean	extracellular, golgi	53.79	40.47
AT2G40890.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	53.52	40.35
KRG95042	Soybean	mitochondrion	53.52	40.27
HORVU3Hr1G078660.1	Barley	endoplasmic reticulum, extracellular	53.26	40.08
Solyc01g096670.2.1	Tomato	endoplasmic reticulum, extracellular	53.79	40.08
TraesCS5A01G554000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	53.26	40.0
CDY35432	Canola	endoplasmic reticulum, extracellular, vacuole	53.0	39.96
Solyc10g078240.1.1	Tomato	endoplasmic reticulum, extracellular	53.0	39.88
PGSC0003DMT400018497	Potato	endoplasmic reticulum, golgi	46.21	39.78
Bra000211.1-P	Field mustard	endoplasmic reticulum, extracellular	52.74	39.76
CDY14751	Canola	endoplasmic reticulum	52.74	39.76
TraesCS3D01G325300.1	Wheat	endoplasmic reticulum	52.74	39.69
TraesCS3A01G331800.1	Wheat	endoplasmic reticulum	52.74	39.69
PGSC0003DMT400018493	Potato	endoplasmic reticulum, extracellular	52.48	39.57
TraesCS3B01G361900.1	Wheat	endoplasmic reticulum	52.48	39.49
Bra004591.1-P	Field mustard	endoplasmic reticulum, extracellular	52.22	39.45
CDX79965	Canola	endoplasmic reticulum, extracellular, vacuole	52.22	39.45
PGSC0003DMT400018498	Potato	endoplasmic reticulum, golgi	31.85	39.35
CDY23876	Canola	endoplasmic reticulum, extracellular	51.96	39.25
Bra016964.1-P	Field mustard	endoplasmic reticulum	49.09	38.13
PGSC0003DMT400018494	Potato	endoplasmic reticulum, extracellular	49.09	36.94
PGSC0003DMT400038205	Potato	extracellular, golgi	48.56	36.69
PGSC0003DMT400075164	Potato	cytosol	43.08	36.59
Solyc10g078230.1.1	Tomato	endoplasmic reticulum, extracellular	48.56	36.54
PGSC0003DMT400038202	Potato	extracellular, golgi	48.3	36.49
Solyc01g009370.1.1	Tomato	extracellular, golgi	48.3	36.49
Solyc10g078220.1.1	Tomato	endoplasmic reticulum	46.48	35.18
TraesCSU01G032500.1	Wheat	cytosol, plasma membrane, plastid	47.52	33.83
Os10t0196100-00	Rice	mitochondrion	20.89	33.33
CDY22488	Canola	cytosol, mitochondrion	28.2	30.51
PGSC0003DMT400008504	Potato	cytosol	16.45	30.29
GSMUA_Achr5P24000_001	Banana	endoplasmic reticulum	26.89	24.82
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	27.94	22.67
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	19.32	21.96
GSMUA_Achr6P31060_001	Banana	endoplasmic reticulum, golgi	18.8	21.95
GSMUA_Achr8P20220_001	Banana	endoplasmic reticulum	27.42	21.88
GSMUA_Achr8P05810_001	Banana	endoplasmic reticulum	26.89	21.68
GSMUA_Achr8P20230_001	Banana	endoplasmic reticulum, golgi	21.15	21.26
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	24.54	20.8
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	22.45	20.48
GSMUA_Achr2P00210_001	Banana	endoplasmic reticulum, plasma membrane	24.02	20.4
GSMUA_Achr9P17300_001	Banana	endoplasmic reticulum, plasma membrane	24.8	20.08
GSMUA_Achr3P30350_001	Banana	endoplasmic reticulum	22.45	18.82
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	20.63	18.68
GSMUA_AchrUn_...	Banana	cytosol	15.4	18.44
GSMUA_Achr8P08630_001	Banana	endoplasmic reticulum, extracellular	20.37	17.57
GSMUA_Achr8P33230_001	Banana	cytosol, mitochondrion, vacuole	20.89	17.2

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705
GO:GO:0020037	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G10110_001	EnsemblPlants:GSMUA_Achr4P10110_001	EnsemblPlants:GSMUA_Achr4T10110_001	InterPro:IPR036396
UniProt:M0SMM8	PFAM:PF00067	PRINTS:PR00463	PANTHER:PTHR24298	PANTHER:PTHR24298:SF0	SUPFAM:SSF48264
SignalP:SignalP-TM	UniParc:UPI000296D18F	SEG:seg	:	:	:

Description

Cytochrome P450 98A2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G10110_001]

Coordinates

chr4:+:7390506..7392401

Molecular Weight (calculated)

43386.4 Da

IEP (calculated)

7.596

GRAVY (calculated)

-0.075

Length

383 amino acids

Sequence
(BLAST)

001: MGAWSFLLWV VCLTTARTAL LWKLVIYREV CSTAQYRFST DGIHRLIHGS RLILQILVPL LRSPWPVVGN LYDIKPVRVR CFAEWAEAYG PIVSVWFGTT
101: LNVVVSRSEL AREVLRDKDQ QLVDRARSRS ATRFSRDGTD LIWADYGPHY VKVLKLCNLE LFSSKRLDAL RPIREDEVIA MVESIFKECS HPDKTGKSLV
201: LLDHLAAVAF NTMTRLVFGK RFVRPDGEAQ GHFVDALMML KDQYDLSEDS IIGILWDMIT AGVGHDSHTS GMGHGGDREE PRTSLTWSAF VKESLRLHPP
301: TPLMLPHKAK IAGYDIPRSA TVIVNIWAIA RDPKTWEQPT EFRSDRFLEE DIDVKGHDFR VLLFGAGRDE AATAFVSACT CRD

Best Arabidopsis Sequence Match ( AT1G74550.1 )
(BLAST)

001: MDLLLISLTT IIIAAYMQNL RRRGSNIPPG PPTRFLVGNL HQLKPLWTQS FSEWSQTYGP IISVWLGSQL AVVVSSSDLA KQVLRDKDYQ LCNRHRTARM
101: TQNGSDLIWS DYGAHYVKMR KLCTLELFSL KSIECFRSMR EMEVSSMVKS IFNDFMSDDQ KPVVLRNYLD SVALNIVSRL VIGKTFEPKD GREFRSIVER
201: ETRLPGATKM LDYTVWLKRL SSWFTSDKAF MKHMARKRNW FKRAVMDEVY GGRDQKCFVQ SLLELKEKDE LTEETVMGLV WNMLTAGADT TAITIEWAMA
301: EMIRCPTVKE KVQDELDSVV GSGRLMSDAD IPKLPFLQCV LKEALRLHPP TPLMLPHKAS ESVQVGGYKV PKGATVYVNV QAIARDPANW SNPDEFRPER
401: FLVEETDVKG QDFRVLPFGS GRRVCPAAQL SLNMMTLALG SLLHCFSWTS STPREHIDMT EKPGLVCYMK APLQALASSR LPQELYL

Arabidopsis Description

CYP98A9Cytochrome P450 98A9 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA60]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.