Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G310000.1 | Wheat | endoplasmic reticulum | 99.22 | 99.22 |
| TraesCS1A01G310500.1 | Wheat | golgi | 98.63 | 98.63 |
| HORVU1Hr1G068030.1 | Barley | endoplasmic reticulum | 96.88 | 96.5 |
| HORVU0Hr1G031710.1 | Barley | endoplasmic reticulum | 96.68 | 96.3 |
| EES18431 | Sorghum | endoplasmic reticulum | 89.65 | 89.65 |
| Zm00001d038555_P001 | Maize | plasma membrane | 88.87 | 88.87 |
| Os05t0494000-01 | Rice | plasma membrane | 88.67 | 88.67 |
| TraesCS4B01G393700.1 | Wheat | extracellular, golgi | 76.95 | 83.12 |
| TraesCS3B01G361900.1 | Wheat | endoplasmic reticulum | 78.12 | 78.59 |
| PGSC0003DMT400008504 | Potato | cytosol | 30.47 | 75.0 |
| GSMUA_Achr8P24010_001 | Banana | endoplasmic reticulum, extracellular | 66.8 | 71.25 |
| KRH66683 | Soybean | extracellular, golgi | 69.34 | 69.74 |
| KRG95042 | Soybean | mitochondrion | 68.55 | 68.96 |
| Solyc01g096670.2.1 | Tomato | endoplasmic reticulum, extracellular | 69.14 | 68.87 |
| CDY35432 | Canola | endoplasmic reticulum, extracellular, vacuole | 67.97 | 68.5 |
| VIT_08s0040g00780.t01 | Wine grape | extracellular, golgi | 67.97 | 68.5 |
| CDY06955 | Canola | endoplasmic reticulum | 67.77 | 68.31 |
| PGSC0003DMT400018493 | Potato | endoplasmic reticulum, extracellular | 67.77 | 68.31 |
| Solyc10g078240.1.1 | Tomato | endoplasmic reticulum, extracellular | 67.77 | 68.17 |
| Bra000211.1-P | Field mustard | endoplasmic reticulum, extracellular | 67.58 | 68.11 |
| AT2G40890.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 67.58 | 68.11 |
| CDY14751 | Canola | endoplasmic reticulum | 67.58 | 68.11 |
| Bra016964.1-P | Field mustard | endoplasmic reticulum | 64.45 | 66.94 |
| CDX79965 | Canola | endoplasmic reticulum, extracellular, vacuole | 65.62 | 66.27 |
| CDY22488 | Canola | cytosol, mitochondrion | 45.51 | 65.82 |
| Bra004591.1-P | Field mustard | endoplasmic reticulum, extracellular | 65.04 | 65.68 |
| CDY23876 | Canola | endoplasmic reticulum, extracellular | 64.45 | 65.09 |
| PGSC0003DMT400038205 | Potato | extracellular, golgi | 60.16 | 60.75 |
| PGSC0003DMT400038202 | Potato | extracellular, golgi | 59.96 | 60.55 |
| Solyc01g009370.1.1 | Tomato | extracellular, golgi | 59.77 | 60.35 |
| PGSC0003DMT400075164 | Potato | cytosol | 53.12 | 60.31 |
| Solyc10g078220.1.1 | Tomato | endoplasmic reticulum | 58.79 | 59.49 |
| PGSC0003DMT400018494 | Potato | endoplasmic reticulum, extracellular | 58.98 | 59.33 |
| Solyc10g078230.1.1 | Tomato | endoplasmic reticulum, extracellular | 58.2 | 58.55 |
| PGSC0003DMT400018497 | Potato | endoplasmic reticulum, golgi | 50.59 | 58.2 |
| GSMUA_Achr4P10110_001 | Banana | endoplasmic reticulum, golgi | 41.02 | 54.83 |
| PGSC0003DMT400018498 | Potato | endoplasmic reticulum, golgi | 31.05 | 51.29 |
| TraesCS6B01G018800.1 | Wheat | endoplasmic reticulum, extracellular | 37.7 | 36.97 |
| TraesCS2B01G592400.1 | Wheat | endoplasmic reticulum | 36.91 | 36.42 |
| TraesCS7B01G310900.1 | Wheat | endoplasmic reticulum, extracellular | 37.5 | 36.36 |
| TraesCS5B01G209100.1 | Wheat | endoplasmic reticulum | 36.33 | 36.05 |
| TraesCS5B01G209200.1 | Wheat | endoplasmic reticulum | 36.13 | 35.92 |
| TraesCS1B01G476400.1 | Wheat | endoplasmic reticulum | 36.13 | 35.58 |
| TraesCS5B01G068500.1 | Wheat | endoplasmic reticulum | 35.94 | 34.85 |
| TraesCS5B01G206000.1 | Wheat | endoplasmic reticulum | 36.13 | 34.84 |
| TraesCS1B01G067500.1 | Wheat | endoplasmic reticulum | 35.16 | 34.68 |
| TraesCS2B01G613200.1 | Wheat | endoplasmic reticulum | 34.77 | 34.3 |
| TraesCS6B01G011200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 34.18 | 34.11 |
| TraesCS2B01G531600.1 | Wheat | extracellular, mitochondrion, plasma membrane, plastid | 33.98 | 33.98 |
| TraesCS6B01G011000.1 | Wheat | endoplasmic reticulum | 33.59 | 33.53 |
| TraesCS2B01G448700.1 | Wheat | mitochondrion | 35.35 | 32.97 |
| TraesCS6B01G406400.1 | Wheat | endoplasmic reticulum | 32.23 | 32.42 |
| TraesCS7B01G209300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 33.4 | 31.49 |
| TraesCS6B01G405900.1 | Wheat | endoplasmic reticulum | 32.03 | 31.36 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:21.6.1.2 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016705 | GO:GO:0020037 | GO:GO:0055114 | InterPro:IPR036396 | PFAM:PF00067 | PRINTS:PR00385 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF0 | SUPFAM:SSF48264 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS1B01G321800 | EnsemblPlants:TraesCS1B01G321800.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1B:+:546146318..546150446
Molecular Weight (calculated)
58056.5 Da
IEP (calculated)
8.225
GRAVY (calculated)
-0.210
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVASLLPFA IALVAIPISL ALLDRLRLGR LPPGPRPWPV LGNLRQIKPV RCRCFQEWAE RYGPIISVWF GSSLTVVVST SELAKEVLKE HDQQLADRPR
101: NRSTQRFSRN GQDLIWADYG PHYIKVRKLC NLELFTQKRL EALRPIREDE VTAMVESVHR AAAGPGNEGK PLVVRNHLAM VSFNNITRLA FGKRFMNANG
201: DIDEEGQEFK IIVNNGIKIG ASLSVAEYIW YLRWLCPLNE ELYKTHNERR DRLTKKIIEE HAQALQERGA KQHFVDALFT LREKYDLSDD TVFGLLWDMI
301: TAGMDTTVIS VEWAMAELVR NPRVQKKLQE ELDSVVGRDR VMSETDFQNL PYLMAVVKES LRLHPPTPLM LPHKASASVK VGGYSIPKGA NVMVNVWAVA
401: RDPKVWSSPL EFRPERFLEE SIDIKGSDFR VLPFGAGRRV CPGAQLGINL VASMIGHMLH HFEWSLPEGA RPEDISMMES PGLVTFMGTP LQAVATPRLE
501: NEELYKRVPV EI
101: NRSTQRFSRN GQDLIWADYG PHYIKVRKLC NLELFTQKRL EALRPIREDE VTAMVESVHR AAAGPGNEGK PLVVRNHLAM VSFNNITRLA FGKRFMNANG
201: DIDEEGQEFK IIVNNGIKIG ASLSVAEYIW YLRWLCPLNE ELYKTHNERR DRLTKKIIEE HAQALQERGA KQHFVDALFT LREKYDLSDD TVFGLLWDMI
301: TAGMDTTVIS VEWAMAELVR NPRVQKKLQE ELDSVVGRDR VMSETDFQNL PYLMAVVKES LRLHPPTPLM LPHKASASVK VGGYSIPKGA NVMVNVWAVA
401: RDPKVWSSPL EFRPERFLEE SIDIKGSDFR VLPFGAGRRV CPGAQLGINL VASMIGHMLH HFEWSLPEGA RPEDISMMES PGLVTFMGTP LQAVATPRLE
501: NEELYKRVPV EI
001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
Arabidopsis Description
CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.