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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G446400.1 Wheat endoplasmic reticulum, plasma membrane 94.02 95.3
TraesCS4A01G446300.1 Wheat cytosol 38.22 95.19
TraesCS7A01G041200.1 Wheat endoplasmic reticulum, plasma membrane 93.63 94.73
TraesCS7D01G036900.1 Wheat endoplasmic reticulum 92.66 94.3
TraesCS6D01G008100.1 Wheat endoplasmic reticulum 85.52 86.35
TraesCS6A01G005400.1 Wheat endoplasmic reticulum, plasma membrane 85.14 85.96
TraesCS6B01G011000.1 Wheat endoplasmic reticulum 83.98 84.8
TraesCS6B01G011200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 83.4 84.21
Zm00001d047424_P001 Maize endoplasmic reticulum 83.01 81.59
EER94806 Sorghum endoplasmic reticulum, plasma membrane 83.01 80.83
OQU92546 Sorghum endoplasmic reticulum, plasma membrane 82.05 80.65
Zm00001d047425_P001 Maize endoplasmic reticulum 80.89 79.81
GSMUA_Achr8P05810_001 Banana endoplasmic reticulum 61.97 67.58
VIT_06s0009g03010.t01 Wine grape cytosol 30.5 62.45
GSMUA_Achr9P17300_001 Banana endoplasmic reticulum, plasma membrane 56.95 62.37
VIT_06s0009g02920.t01 Wine grape mitochondrion 43.82 58.21
PGSC0003DMT400001124 Potato cytosol, endoplasmic reticulum, plastid 48.26 55.93
VIT_06s0009g02840.t01 Wine grape endoplasmic reticulum 53.86 54.92
VIT_06s0009g02970.t01 Wine grape endoplasmic reticulum 53.86 54.92
VIT_06s0009g02860.t01 Wine grape endoplasmic reticulum 52.7 53.74
Solyc11g066580.1.1 Tomato endoplasmic reticulum, golgi 51.54 52.25
VIT_06s0009g03140.t01 Wine grape endoplasmic reticulum 50.97 51.66
KRH18622 Soybean endoplasmic reticulum 46.53 51.61
HORVU6Hr1G087250.1 Barley endoplasmic reticulum 51.35 50.09
HORVU4Hr1G063780.1 Barley endoplasmic reticulum 48.65 49.7
KRG89698 Soybean endoplasmic reticulum 47.49 47.77
VIT_08s0007g05160.t01 Wine grape extracellular, mitochondrion, plasma membrane, plastid 50.77 47.64
HORVU6Hr1G002400.2 Barley golgi, peroxisome 41.31 40.07
HORVU1Hr1G094880.5 Barley endoplasmic reticulum, plasma membrane 41.51 39.96
HORVU5Hr1G061340.1 Barley endoplasmic reticulum 38.61 37.74
HORVU5Hr1G061930.2 Barley endoplasmic reticulum 36.68 35.85
HORVU5Hr1G017360.1 Barley endoplasmic reticulum 36.87 35.83
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 34.17 34.77
HORVU2Hr1G100050.1 Barley mitochondrion 30.89 33.9
HORVU7Hr1G042260.3 Barley endoplasmic reticulum 36.87 33.51
HORVU0Hr1G031710.1 Barley endoplasmic reticulum 32.24 32.49
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 32.24 32.49
HORVU5Hr1G061950.2 Barley plastid 32.43 28.47
HORVU2Hr1G125520.1 Barley extracellular, golgi 16.6 27.04
HORVU2Hr1G119210.4 Barley endoplasmic reticulum, golgi 18.15 26.18
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287VG23InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114EnsemblPlantsGene:HORVU7Hr1G007580EnsemblPlants:HORVU7Hr1G007580.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF177SUPFAM:SSF48264UniParc:UPI000B47B839
SEG:seg:::::
Description
No Description!
Coordinates
chrchr7H:-:9879963..9884227
Molecular Weight (calculated)
56617.8 Da
IEP (calculated)
8.030
GRAVY (calculated)
0.027
Length
518 amino acids
Sequence
(BLAST)
001: MQLAALCTDP FVLSCTFLCL LLHLALRRSL NRRSSSRLPP GPPGLPILGA LPFVGPAPHA GLAALARKHG PVMYLRMGTC GVVVASSPSA ARTFLKALDA
101: RFANRPAVAS AADITYGRQN MVFADYGPKW KLMRKLASVH LLGPRAVADW ARVRRDEAGR VLRGMKEAAE VTGRAVVVPE VLVCALANIV GQITVSRRVF
201: DAQGDESSSY KEMIVSLLTG TGLFNISDFV PALSWMDLQG VQARLRRVHR QFDGLITKLL AEHAATAEER ARDGRLDFVD RLRASSNDGG DGNDDGETIT
301: EVNIKGLIFD MFTAGTDTSS IIVEWAMAEM INNPSIMARA QEEMDRVVGR GRRLEESDIA NLPYLQAICK EAMRLHPSTP LSLPHFSFEE CEVDGHHVPA
401: NTRLLINIWA IGRDPAAWED PLEFRPERFM SGPAAKIDPM GNNFELIPFG AGRRICAGKL AGMVFVQYFL GTLVHAFEWR LPDGEEKVDM AETFGLALPK
501: AVPLKALVTP RLVPAAYA
Best Arabidopsis Sequence Match ( AT2G45550.1 )
(BLAST)
001: MDIISGQALF LLFCFISSCF LISTTARSRR SSGRAATLPP GPPRLPIIGN IHQVGKNPHS SFADLAKIYG PIMSLKFGCL NSVVITSPEA AREVLRTHDQ
101: ILSGRKSNDS IRCFGHEEVS VIWLPPSSAR WRMLRKLSVT LMFSPQRTEA TKALRMKKVQ ELVSFMNESS ERKEAVDISR ASYTTVLNII SNILFSVDLG
201: SYDSKKSNEF QDTVIGAMEA AGKPDAANYF PFMGFLDLQG NRKAMRGLTE RLFRVFRGFM DAKIAEKSLG NYSKDVSNRD FLDSLLILNE GDEAELDNND
301: IEHLLLDMFT AGTDTSSSTL EWAMAELLRN PKTMVKAQAE MDRVLGQNSV VQESDISGLP YLQAVVKETF RLHPAAPLLV PRKAESDVEV LGFMVPKDTQ
401: VLVNVWAIGR DPSVWENPSQ FEPERFMGKD IDVKGRDYEL TPFGGGRRIC PGLPLAVKTV SLMLASLLYS FDWKLPNGVV SEDLDMDETF GITLHRTNTL
501: YAIPVKKQTI N
Arabidopsis Description
CYP76C4Cytochrome P450 76C4 [Source:UniProtKB/Swiss-Prot;Acc:O64635]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.