Factsheet for VIT_06s0009g03010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G446300.1	Wheat	cytosol	54.55	66.35
VIT_06s0009g02920.t01	Wine grape	mitochondrion	96.84	62.82
VIT_06s0009g02860.t01	Wine grape	endoplasmic reticulum	99.21	49.41
GSMUA_AchrUn_...	Banana	cytosol	62.06	49.06
VIT_06s0009g02970.t01	Wine grape	endoplasmic reticulum	97.23	48.43
VIT_06s0009g02840.t01	Wine grape	endoplasmic reticulum	96.44	48.03
PGSC0003DMT400001124	Potato	cytosol, endoplasmic reticulum, plastid	79.05	44.74
Solyc11g066580.1.1	Tomato	endoplasmic reticulum, golgi	78.26	38.75
VIT_06s0009g03140.t01	Wine grape	endoplasmic reticulum	77.47	38.36
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	62.85	37.86
KRH18622	Soybean	endoplasmic reticulum	67.19	36.4
GSMUA_Achr2P00210_001	Banana	endoplasmic reticulum, plasma membrane	62.85	35.26
KRG89698	Soybean	endoplasmic reticulum	70.36	34.56
VIT_08s0007g05160.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	74.7	34.24
GSMUA_Achr9P17300_001	Banana	endoplasmic reticulum, plasma membrane	61.66	32.98
GSMUA_Achr8P05810_001	Banana	endoplasmic reticulum	61.26	32.63
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	56.52	31.64
TraesCS7D01G036900.1	Wheat	endoplasmic reticulum	62.06	30.84
TraesCS4A01G446400.1	Wheat	endoplasmic reticulum, plasma membrane	62.06	30.72
HORVU7Hr1G007580.1	Barley	endoplasmic reticulum, plasma membrane	62.45	30.5
VIT_17s0000g07200.t01	Wine grape	cytosol, mitochondrion	54.15	30.38
TraesCS7A01G041200.1	Wheat	endoplasmic reticulum, plasma membrane	61.26	30.27
TraesCS6D01G008100.1	Wheat	endoplasmic reticulum	61.26	30.21
TraesCS6B01G011000.1	Wheat	endoplasmic reticulum	60.87	30.02
TraesCS6A01G005400.1	Wheat	endoplasmic reticulum, plasma membrane	60.47	29.82
TraesCS6B01G011200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	60.08	29.63
Zm00001d047424_P001	Maize	endoplasmic reticulum	61.26	29.41
Zm00001d047425_P001	Maize	endoplasmic reticulum	60.47	29.14
EER94806	Sorghum	endoplasmic reticulum, plasma membrane	61.26	29.14
TraesCS2B01G531600.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	58.1	28.71
TraesCS2D01G504100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	57.31	28.38
OQU92546	Sorghum	endoplasmic reticulum, plasma membrane	58.5	28.08
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	50.99	27.33
VIT_17s0000g07210.t01	Wine grape	extracellular, golgi	54.55	27.11
VIT_07s0031g01370.t01	Wine grape	plastid	39.53	26.6
VIT_17s0000g03910.t01	Wine grape	cytosol	41.5	22.93
VIT_11s0016g01050.t01	Wine grape	endoplasmic reticulum	44.66	22.2
VIT_07s0031g01390.t01	Wine grape	endoplasmic reticulum, extracellular	43.08	21.89
VIT_11s0016g01020.t01	Wine grape	endoplasmic reticulum	43.48	21.61
VIT_08s0040g00780.t01	Wine grape	extracellular, golgi	43.08	21.46
VIT_07s0031g01380.t01	Wine grape	mitochondrion	39.53	21.05
VIT_09s0002g01090.t01	Wine grape	endoplasmic reticulum	41.9	20.74
VIT_11s0016g00980.t01	Wine grape	plastid	43.08	20.15
VIT_15s0046g00330.t01	Wine grape	endoplasmic reticulum, golgi	41.5	20.04
VIT_17s0000g03940.t01	Wine grape	plasma membrane	37.94	16.05
VIT_17s0000g03930.t01	Wine grape	endoplasmic reticulum, extracellular	35.57	9.12

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ProteinID:CCB49071	ProteinID:CCB49071.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6HA64	EMBL:FN595504	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748
GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF336	SUPFAM:SSF48264
TIGR:TC65532	UniParc:UPI0002109861	ArrayExpress:VIT_06s0009g03010	EnsemblPlantsGene:VIT_06s0009g03010	EnsemblPlants:VIT_06s0009g03010.t01	:

Description

No Description!

Coordinates

chr6:+:16048722..16050400

Molecular Weight (calculated)

28290.0 Da

IEP (calculated)

6.883

GRAVY (calculated)

-0.271

Length

253 amino acids

Sequence
(BLAST)

001: MIEEHTASAH ERKGNPDFLD VVMGHQGNST GEKLTLTNIK ALLLNLFTAG TDTSSSVIEW SLAEMLKNPS ILKRAHEEMD QVIGRSRRLV ESDLPKLPYL
101: QAICKESFRK HPSTPLNLPR VSTQACEVNG YYIPKNTRLS VNIWAIGRDP DVWESPEEFR PERFLSGRNA KIDPRGNDFE LIPFGAGRRI CAGTRMGIVL
201: VEYILGTLVH SFDWKMPDGV EINMDEAFGL ALQKAVSLSA MVTPRLHQSA YAV

Best Arabidopsis Sequence Match ( AT1G33720.4 )
(BLAST)

001: MLRKLSATQL FSPQCIQATK ALRMKKVQEL VNFLSESCER EEAVDISHVS FVTALNIISN ILFSVNLGSY DSKNSSAFQE MVIGYQESIG NPDLANFFPF
101: MRFLDLQGNS KKMRESSGRL LQVFREFYDA RIVEKSSRSV EKDVSSKDFL DVLIDLQQGD ETEINIDEIE HLLLDMFVAG TDTNSSTVEW AMAELLGNPK
201: TMTKVQDEIN HVIGQNGDFQ ESDISKLPYL KAVVKETFRL HPAAPFLLQR KAETNVEILG FTVLKDSQVL VNVWAIGRDP LVWENPTHFE PERFLGKEID
301: VKGTDYELTP FGAGRRICPG LPLAMKTVHL MLASLLYTFE WKLPNGVGSE DLDMEETFGL TVHKTNPLLA VPLKKRAIN

Arabidopsis Description

CYP76C6Cytochrome P450, family 76, subfamily C, polypeptide 6 [Source:UniProtKB/TrEMBL;Acc:Q9LQ25]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.