Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033551.1-P | Field mustard | extracellular | 88.79 | 86.07 |
| CDY32232 | Canola | extracellular, golgi | 88.22 | 83.42 |
| CDY34446 | Canola | extracellular, golgi | 87.07 | 82.34 |
| VIT_05s0077g00720.t01 | Wine grape | extracellular | 51.44 | 65.57 |
| KRH02395 | Soybean | extracellular | 56.32 | 60.87 |
| Solyc01g058520.2.1 | Tomato | extracellular | 57.18 | 59.94 |
| KRH50693 | Soybean | extracellular | 55.75 | 58.43 |
| PGSC0003DMT400029815 | Potato | cytosol | 49.43 | 57.91 |
| TraesCS5A01G323200.1 | Wheat | extracellular | 55.17 | 55.17 |
| TraesCS5D01G330300.1 | Wheat | extracellular | 54.6 | 54.6 |
| TraesCS5B01G323700.1 | Wheat | extracellular | 54.31 | 54.15 |
| HORVU5Hr1G082510.1 | Barley | extracellular | 54.89 | 53.8 |
| Os08t0302000-01 | Rice | extracellular | 56.61 | 53.68 |
| EES13656 | Sorghum | extracellular | 57.18 | 53.49 |
| Zm00001d024119_P001 | Maize | extracellular | 55.75 | 52.57 |
| GSMUA_Achr4P04110_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 54.31 | 49.74 |
| AT2G35380.1 | Thale cress | extracellular | 45.11 | 46.73 |
| AT4G36430.1 | Thale cress | extracellular | 43.68 | 45.92 |
| AT2G18150.1 | Thale cress | extracellular | 43.97 | 45.27 |
| AT5G66390.1 | Thale cress | extracellular | 43.68 | 45.24 |
| AT5G19890.1 | Thale cress | extracellular | 42.53 | 45.12 |
| AT1G44970.1 | Thale cress | extracellular | 44.54 | 44.8 |
| AT2G18140.1 | Thale cress | extracellular | 42.82 | 44.21 |
| AT3G50990.1 | Thale cress | extracellular, plastid, vacuole | 43.68 | 44.19 |
| AT1G68850.1 | Thale cress | extracellular | 42.53 | 44.05 |
| AT5G06720.1 | Thale cress | extracellular | 42.24 | 43.88 |
| AT1G49570.1 | Thale cress | extracellular | 43.1 | 42.86 |
| AT2G22420.1 | Thale cress | extracellular | 40.23 | 42.55 |
| AT2G38390.1 | Thale cress | extracellular | 41.09 | 40.97 |
| AT5G06730.1 | Thale cress | extracellular | 41.95 | 40.78 |
| AT4G08780.1 | Thale cress | vacuole | 40.52 | 40.75 |
| AT4G08770.1 | Thale cress | extracellular | 39.94 | 40.17 |
| AT2G38380.1 | Thale cress | extracellular | 40.23 | 40.11 |
| AT3G49120.1 | Thale cress | extracellular | 40.52 | 39.94 |
| AT3G32980.1 | Thale cress | extracellular | 40.23 | 39.77 |
| AT5G19880.1 | Thale cress | extracellular | 36.78 | 38.91 |
| AT3G49110.1 | Thale cress | extracellular | 39.37 | 38.7 |
Protein Annotations
| KEGG:00940+1.11.1.7 | Gene3D:1.10.420.10 | Gene3D:1.10.520.10 | MapMan:35.1 | EntrezGene:827322 | ProteinID:AEE83724.2 |
| EMBL:AK175661 | EMBL:AK175982 | ArrayExpress:AT4G16270 | EnsemblPlantsGene:AT4G16270 | RefSeq:AT4G16270 | TAIR:AT4G16270 |
| RefSeq:AT4G16270-TAIR-G | EnsemblPlants:AT4G16270.1 | TAIR:AT4G16270.1 | EMBL:BT011747 | ProteinID:CAB10406.1 | ProteinID:CAB78669.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0020037 | GO:GO:0042744 | GO:GO:0046872 | GO:GO:0055114 | GO:GO:0098869 |
| InterPro:Haem_peroxidase | InterPro:Haem_peroxidase_pln/fun/bac | InterPro:IPR002016 | RefSeq:NP_193362.3 | UniProt:O23474 | PFAM:PF00141 |
| PO:PO:0000037 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0025022 | PRINTS:PR00458 | PRINTS:PR00461 | ScanProsite:PS00435 | ScanProsite:PS00436 | PFscan:PS50873 |
| PANTHER:PTHR31388 | PANTHER:PTHR31388:SF44 | InterPro:Peroxidase_pln | InterPro:Peroxidases_AS | InterPro:Peroxidases_heam-ligand_BS | SUPFAM:SSF48113 |
| InterPro:Secretory_peroxidase | SignalP:SignalP-noTM | UniParc:UPI0000131542 | SEG:seg | : | : |
Description
PER40Peroxidase 40 [Source:UniProtKB/Swiss-Prot;Acc:O23474]
Coordinates
chr4:+:9205080..9206483
Molecular Weight (calculated)
37462.2 Da
IEP (calculated)
4.221
GRAVY (calculated)
-0.064
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNLFNLFLM FFFAMPILSL SENPTNFSES CEDGSGETGS SFGIGFDLVL DFGLYRNSCP EAESIVYSWV ETTVLEDPRM AASLLRLHFH DCFVNGCDAS
101: VLLDDTEGLV GEKTAPPNLN SLRGFEVIDS IKSDIESVCP ETVSCADILA MAARDSVVVS GGPRWEVEVG RKDSRTASKQ AATNGLPSPN STVSTLISTF
201: QNLGLSQTDM VALSGGHTLG KARCTSFTAR LQPLQTGQPA NHGDNLEFLE SLQQLCSTVG PSVGITQLDL VTPSTFDNQY YVNLLSGEGL LPSDQALAVQ
301: DPGTRAIVET YATDQSVFFE DFKNAMVKMG GIPGGSNSEI RKNCRMIN
101: VLLDDTEGLV GEKTAPPNLN SLRGFEVIDS IKSDIESVCP ETVSCADILA MAARDSVVVS GGPRWEVEVG RKDSRTASKQ AATNGLPSPN STVSTLISTF
201: QNLGLSQTDM VALSGGHTLG KARCTSFTAR LQPLQTGQPA NHGDNLEFLE SLQQLCSTVG PSVGITQLDL VTPSTFDNQY YVNLLSGEGL LPSDQALAVQ
301: DPGTRAIVET YATDQSVFFE DFKNAMVKMG GIPGGSNSEI RKNCRMIN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.