Factsheet for PGSC0003DMT400029815

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g058520.2.1	Tomato	extracellular	87.54	78.31
VIT_05s0077g00720.t01	Wine grape	extracellular	60.94	66.3
KRH02395	Soybean	extracellular	61.95	57.14
KRH50693	Soybean	extracellular	60.94	54.52
AT4G16270.1	Thale cress	extracellular, golgi	57.91	49.43
TraesCS5D01G330300.1	Wheat	extracellular	55.56	47.41
TraesCS5A01G323200.1	Wheat	extracellular	55.56	47.41
HORVU5Hr1G082510.1	Barley	extracellular	56.23	47.04
TraesCS5B01G323700.1	Wheat	extracellular	55.22	46.99
Bra033551.1-P	Field mustard	extracellular	56.57	46.8
PGSC0003DMT400026081	Potato	cytosol	40.07	45.77
CDY34446	Canola	extracellular, golgi	56.57	45.65
CDY32232	Canola	extracellular, golgi	56.57	45.65
Os08t0302000-01	Rice	extracellular	55.56	44.96
GSMUA_Achr4P04110_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	57.24	44.74
EES13656	Sorghum	extracellular	55.56	44.35
Zm00001d024119_P001	Maize	extracellular	54.88	44.17
PGSC0003DMT400016340	Potato	extracellular	46.46	42.72
PGSC0003DMT400066354	Potato	cytosol	44.44	42.44
PGSC0003DMT400009606	Potato	extracellular	45.79	41.09
PGSC0003DMT400061826	Potato	extracellular	45.45	40.91
PGSC0003DMT400013189	Potato	cytosol	42.42	40.65
PGSC0003DMT400040062	Potato	extracellular, golgi	44.78	40.18
PGSC0003DMT400058061	Potato	extracellular	44.78	39.94
PGSC0003DMT400026090	Potato	extracellular	43.43	39.69
PGSC0003DMT400040186	Potato	extracellular	42.76	38.96
PGSC0003DMT400041812	Potato	extracellular	43.43	38.28
PGSC0003DMT400082008	Potato	extracellular	40.07	36.73
PGSC0003DMT400081883	Potato	extracellular	34.68	33.77
PGSC0003DMT400058134	Potato	extracellular	43.43	28.99

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:102582765	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1ATF7	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400011458	PGSC:PGSC0003DMG400011458
EnsemblPlants:PGSC0003DMT400029815	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	PFscan:PS50873	PANTHER:PTHR31388
PANTHER:PTHR31388:SF44	InterPro:Peroxidase_pln	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	UniParc:UPI000295B485
RefSeq:XP_015167274.1	RefSeq:XP_015167275.1	:	:	:	:

Description

Peroxidase 40 [Source:PGSC_GENE;Acc:PGSC0003DMG400011458]

Coordinates

chr1:+:47291095..47300139

Molecular Weight (calculated)

32038.9 Da

IEP (calculated)

4.603

GRAVY (calculated)

-0.160

Length

297 amino acids

Sequence
(BLAST)

001: MIETTTEEVL RKAGFRLNIF AIQNVRFLAS FITEAGILLK RSKGCDASVL LDDTPNFSGE KTAGPNLNSL RGFEVIDNIK ADLEYACPQT VSCADILSIA
101: ARDSVVLSGG LGWQVQMGRK DSLTASKTAA NNNIPGPNSN IATLVTNFQN LGLSLQDMVT LSGAHTIGKA RCATFSSRLN NNNAGVSNSE MNLDFLQSLQ
201: QLCSANNNTT LANLDDMTPS TFDNHYYVNL LSGKGLLVSD QVLATGDDDN TREIVQNYVD DPSVFLEDFK NSMLKMGSLP PPTGTNGEIR VNCRVIN

Best Arabidopsis Sequence Match ( AT4G16270.1 )
(BLAST)

001: MKNLFNLFLM FFFAMPILSL SENPTNFSES CEDGSGETGS SFGIGFDLVL DFGLYRNSCP EAESIVYSWV ETTVLEDPRM AASLLRLHFH DCFVNGCDAS
101: VLLDDTEGLV GEKTAPPNLN SLRGFEVIDS IKSDIESVCP ETVSCADILA MAARDSVVVS GGPRWEVEVG RKDSRTASKQ AATNGLPSPN STVSTLISTF
201: QNLGLSQTDM VALSGGHTLG KARCTSFTAR LQPLQTGQPA NHGDNLEFLE SLQQLCSTVG PSVGITQLDL VTPSTFDNQY YVNLLSGEGL LPSDQALAVQ
301: DPGTRAIVET YATDQSVFFE DFKNAMVKMG GIPGGSNSEI RKNCRMIN

Arabidopsis Description

PER40Peroxidase 40 [Source:UniProtKB/Swiss-Prot;Acc:O23474]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.