Factsheet for PGSC0003DMT400081883

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

extracellular: 24773703

msms PMID: 24773703 doi

T Bengtsson, D Weighill, E Proux-Wéra, F Levander, S Resjö, DD Burra, LI Moushib, PE Hedley, E Liljeroth, D Jacobson, E Alexandersson, E Andreasson

Department of Plant Protection Biology, Swedish University of Agricultural Sciences, Box 102, SE-230 53 Alnarp, Sweden. erik.alexandersson@slu.se.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g006290.2.1	Tomato	extracellular	88.2	82.26
PGSC0003DMT400082008	Potato	extracellular	72.46	68.21
VIT_06s0004g01190.t01	Wine grape	extracellular	59.67	59.67
HORVU3Hr1G091750.1	Barley	mitochondrion	31.8	56.73
PGSC0003DMT400040186	Potato	extracellular	54.75	51.23
GSMUA_Achr7P11330_001	Banana	extracellular, plasma membrane	54.75	50.15
TraesCS1A01G104300.1	Wheat	extracellular	42.95	46.79
Os03t0234900-01	Rice	extracellular	48.2	44.14
EER92589	Sorghum	extracellular	48.2	43.62
HORVU4Hr1G064950.2	Barley	extracellular	48.2	43.62
TraesCS1D01G402200.1	Wheat	cytosol	35.08	43.5
TraesCS4B01G232800.1	Wheat	extracellular	47.87	43.45
Zm00001d028348_P001	Maize	extracellular	47.87	43.45
TraesCS4D01G234000.1	Wheat	extracellular	47.54	43.15
Zm00001d028347_P001	Maize	extracellular	47.21	42.99
EER95209	Sorghum	extracellular	46.56	42.9
TraesCS4A01G076700.1	Wheat	extracellular	47.21	42.86
Os03t0234500-01	Rice	extracellular	46.89	42.81
TraesCS4D01G234200.1	Wheat	extracellular	47.21	42.73
PGSC0003DMT400058061	Potato	extracellular	46.23	42.34
TraesCS4A01G076900.1	Wheat	extracellular	46.89	42.31
EER91824	Sorghum	extracellular	46.89	42.31
TraesCS4B01G233000.1	Wheat	extracellular	46.56	42.14
PGSC0003DMT400026081	Potato	cytosol	35.74	41.92
PGSC0003DMT400061826	Potato	extracellular	45.25	41.82
TraesCS7B01G325800.1	Wheat	unclear	46.89	41.57
TraesCS1D01G096400.1	Wheat	extracellular	45.9	41.18
TraesCS7D01G417400.1	Wheat	unclear	46.56	41.16
GSMUA_Achr10P...	Banana	extracellular	46.56	41.16
TraesCS3B01G446700.1	Wheat	extracellular	43.28	41.12
PGSC0003DMT400040062	Potato	extracellular, golgi	44.59	41.09
Os10t0109300-01	Rice	extracellular	45.25	41.07
TraesCS3A01G412500.1	Wheat	extracellular	43.28	40.99
TraesCS3B01G446400.1	Wheat	extracellular	43.28	40.87
TraesCS3A01G414600.1	Wheat	extracellular	43.28	40.87
TraesCS3B01G446600.1	Wheat	extracellular	43.28	40.87
TraesCS3D01G406900.1	Wheat	extracellular	43.28	40.87
TraesCS3D01G407200.1	Wheat	extracellular	42.95	40.81
TraesCS1B01G115900.1	Wheat	extracellular	45.57	40.64
TraesCS7A01G424100.1	Wheat	unclear	46.23	40.63
TraesCS3A01G412400.1	Wheat	extracellular, vacuole	42.95	40.56
TraesCS3B01G446800.1	Wheat	extracellular	42.62	40.5
TraesCS3D01G407100.1	Wheat	extracellular	42.62	40.5
PGSC0003DMT400013189	Potato	cytosol	40.98	40.32
TraesCS3D01G407000.1	Wheat	extracellular	42.3	40.19
TraesCS3B01G446500.1	Wheat	extracellular	42.3	40.19
Zm00001d030199_P002	Maize	extracellular	44.26	40.06
PGSC0003DMT400026090	Potato	extracellular	42.62	40.0
TraesCS3B01G446300.1	Wheat	extracellular	42.3	39.94
PGSC0003DMT400066354	Potato	cytosol	40.66	39.87
Zm00001d014341_P001	Maize	extracellular	44.26	39.47
PGSC0003DMT400016340	Potato	extracellular	41.64	39.32
PGSC0003DMT400009606	Potato	extracellular	42.3	38.97
EES18269	Sorghum	extracellular	41.64	38.96
HORVU3Hr1G091740.1	Barley	extracellular, mitochondrion	37.38	38.91
OQU78052	Sorghum	extracellular	40.98	38.7
HORVU7Hr1G098110.3	Barley	plastid	46.89	38.13
EES18270	Sorghum	vacuole	40.0	38.12
EES19563	Sorghum	extracellular	39.67	37.93
EES18266	Sorghum	extracellular, plastid	40.0	37.89
HORVU1Hr1G020690.5	Barley	extracellular	45.25	37.6
EES18267	Sorghum	vacuole	39.67	37.58
Zm00001d010218_P001	Maize	extracellular, plasma membrane	40.66	37.58
EES18268	Sorghum	extracellular	39.67	37.12
PGSC0003DMT400041812	Potato	extracellular	40.98	37.09
HORVU3Hr1G091730.1	Barley	plastid	37.05	37.05
Os10t0107000-00	Rice	extracellular	38.69	34.81
HORVU4Hr1G065000.1	Barley	cytosol	20.66	34.81
PGSC0003DMT400029815	Potato	cytosol	33.77	34.68
TraesCS3B01G446200.1	Wheat	extracellular	25.9	33.33
PGSC0003DMT400058134	Potato	extracellular	43.61	29.89

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:M1D578	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400032147	PGSC:PGSC0003DMG400032147	EnsemblPlants:PGSC0003DMT400081883
PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388
PANTHER:PTHR31388:SF28	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002955A34	:	:	:

Description

Peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400032147]

Coordinates

chr1:+:1754443..1757775

Molecular Weight (calculated)

33741.5 Da

IEP (calculated)

8.006

GRAVY (calculated)

-0.067

Length

305 amino acids

Sequence
(BLAST)

001: MSFLRFIVAI FFLVSIFGVS NAHYKLSPTF YDCTCPNVID IVRDVMEQIQ RRDVRAGAKI IRLHFHDCFV NGCDGSILLD NATGIVSEKG ANPNVGAGGF
101: EIVDEIKTAL ENECPGVVSC ADILALASEI GVVLAGGPSW QVPLGRRDSL TANRSGANSD IPSPTETLAV MIPQFTRKGL DLTDLVALSG AHTFGRARCR
201: TFNQRLFNFS GSGRPDPTID PNYLKTLQRL CPQGGNGGTF ANLDKSTPDE FDNYYFTNLK NHQGLLQTDT IRNLIIKDEL FYHLKIIFRH KNKFMTKNIS
301: SIFRL

Best Arabidopsis Sequence Match ( AT5G06720.1 )
(BLAST)

001: MAVTNLPTCD GLFIISLIVI VSSIFGTSSA QLNATFYSGT CPNASAIVRS TIQQALQSDT RIGASLIRLH FHDCFVNGCD ASILLDDTGS IQSEKNAGPN
101: VNSARGFNVV DNIKTALENA CPGVVSCSDV LALASEASVS LAGGPSWTVL LGRRDSLTAN LAGANSSIPS PIESLSNITF KFSAVGLNTN DLVALSGAHT
201: FGRARCGVFN NRLFNFSGTG NPDPTLNSTL LSTLQQLCPQ NGSASTITNL DLSTPDAFDN NYFANLQSND GLLQSDQELF STTGSSTIAI VTSFASNQTL
301: FFQAFAQSMI NMGNISPLTG SNGEIRLDCK KVNGS

Arabidopsis Description

PER53Peroxidase 53 [Source:UniProtKB/Swiss-Prot;Acc:Q42578]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.