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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES19563 Sorghum extracellular 96.25 96.55
OQU78052 Sorghum extracellular 94.38 93.5
EES18267 Sorghum vacuole 84.06 83.54
EES18266 Sorghum extracellular, plastid 82.5 81.99
EES18269 Sorghum extracellular 81.88 80.37
HORVU3Hr1G091750.1 Barley mitochondrion 42.81 80.12
EES18268 Sorghum extracellular 80.0 78.53
TraesCS3D01G407200.1 Wheat extracellular 75.62 75.39
TraesCS3B01G446700.1 Wheat extracellular 75.62 75.39
TraesCS3B01G446800.1 Wheat extracellular 75.31 75.08
TraesCS3D01G406900.1 Wheat extracellular 75.31 74.61
TraesCS3A01G412400.1 Wheat extracellular, vacuole 75.0 74.3
TraesCS3D01G407100.1 Wheat extracellular 74.38 74.14
TraesCS3B01G446400.1 Wheat extracellular 74.69 73.99
TraesCS3A01G414600.1 Wheat extracellular 74.69 73.99
TraesCS3B01G446500.1 Wheat extracellular 74.06 73.83
TraesCS3D01G407000.1 Wheat extracellular 73.75 73.52
TraesCS3A01G412500.1 Wheat extracellular 73.75 73.29
TraesCS3B01G446300.1 Wheat extracellular 73.44 72.76
TraesCS3B01G446600.1 Wheat extracellular 73.44 72.76
HORVU3Hr1G091740.1 Barley extracellular, mitochondrion 62.5 68.26
Os10t0107000-00 Rice extracellular 66.88 63.13
HORVU3Hr1G091730.1 Barley plastid 55.0 57.7
GSMUA_Achr6P11440_001 Banana extracellular 51.88 55.33
EER92589 Sorghum extracellular 56.88 54.01
EER91824 Sorghum extracellular 56.25 53.25
EER95209 Sorghum extracellular 54.06 52.27
GSMUA_AchrUn_... Banana extracellular, vacuole 49.69 51.46
KRG95399 Soybean extracellular 52.19 50.45
TraesCS3B01G446200.1 Wheat extracellular 37.19 50.21
KRH38084 Soybean extracellular 51.56 49.85
KRH71834 Soybean extracellular 51.56 49.85
PGSC0003DMT400040186 Potato extracellular 50.62 49.69
Solyc11g072920.1.1 Tomato extracellular 50.62 49.54
VIT_08s0007g06650.t01 Wine grape extracellular, vacuole 51.25 48.96
AT5G06720.1 Thale cress extracellular 49.06 46.87
CDX98949 Canola extracellular 49.06 46.45
KRH67078 Soybean plastid 51.88 46.37
AT5G06730.1 Thale cress extracellular 51.88 46.37
Solyc10g078890.1.1 Tomato extracellular 48.75 46.15
CDX70075 Canola extracellular 48.44 45.86
Bra009220.1-P Field mustard extracellular 48.44 45.86
CDX70074 Canola extracellular 51.25 45.81
Bra009221.1-P Field mustard extracellular 50.94 45.53
CDX98950 Canola extracellular 50.94 45.53
VIT_06s0004g01190.t01 Wine grape extracellular 43.12 45.25
Solyc01g006290.2.1 Tomato extracellular 45.94 44.95
Solyc01g006300.2.1 Tomato extracellular 45.62 44.92
PGSC0003DMT400082008 Potato extracellular 45.31 44.75
EER91558 Sorghum extracellular 44.69 43.87
EES00880 Sorghum extracellular 46.88 43.73
EER92588 Sorghum extracellular 45.31 43.67
EES00525 Sorghum extracellular 45.62 43.45
EES00526 Sorghum extracellular 45.0 43.11
EES10805 Sorghum extracellular 44.69 40.97
EES02729 Sorghum extracellular 43.75 40.35
PGSC0003DMT400081883 Potato extracellular 38.12 40.0
OQU89643 Sorghum extracellular, golgi 41.25 38.82
EES13656 Sorghum extracellular 43.12 37.1
OQU76227 Sorghum extracellular 39.38 36.63
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1EntrezGene:8058486UniProt:C5YYA2
EnsemblPlants:EES18270ProteinID:EES18270ProteinID:EES18270.1GO:GO:0003674GO:GO:0003824GO:GO:0004601
GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0006950GO:GO:0006979GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016491GO:GO:0020037GO:GO:0042744
GO:GO:0046872GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016
PFAM:PF00141PRINTS:PR00458PRINTS:PR00461PFscan:PS50873PANTHER:PTHR31388PANTHER:PTHR31388:SF38
MetaCyc:PWY-5461MetaCyc:PWY-5466MetaCyc:PWY-5469MetaCyc:PWY-6824MetaCyc:PWY-7214MetaCyc:PWY-7445
InterPro:Peroxidase_plnEnsemblPlantsGene:SORBI_3009G145700SUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0001A887F2RefSeq:XP_002439840.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr9:+:50274339..50276024
Molecular Weight (calculated)
34434.0 Da
IEP (calculated)
8.335
GRAVY (calculated)
-0.172
Length
320 amino acids
Sequence
(BLAST)
001: MAASSRVSSP GWLLAAHCAL LLALLLAGAA RGHAGAALSS AFYDQSCPGA YNVVRRVIQS ARVSDPRIPA SLIRLHFHDC FVNGCDGSLL LDDDLPAIQT
101: EKNVPANNNS ARGFPVVDGI KRALEEACPG IVSCADILAL AAEISVELAG GPRWRVLLGR RDGTTTNVQS AKNLPSPFDS LAKLQEKFRN VNLDDTDLVA
201: LQGAHTFGKV QCQFTRHNCS AGQPQGALED LDQVTPTVFD NKYYGNLLHG QAQLPSDQVM LSDPTAPRTT APVVHRFASN QKDFFTNFVT SMIKMGNISP
301: LTGKDGEIRK NCRRVNRKGN
Best Arabidopsis Sequence Match ( AT3G32980.1 )
(BLAST)
001: MNFSYSSLST WTTLMTLGCL LLHSSISSAQ LTPTFYDNTC PSVFTIVRDT IVNELRSDPR IAASILRLHF HDCFVNGCDA SILLDNTTSF RTEKDAAPNA
101: NSARGFPVID RMKAAVETAC PRTVSCADIL TIAAQQAVNL AGGPSWRVPL GRRDSLQAFF ALANTNLPAP FFTLPQLKAS FQNVGLDRPS DLVALSGGHT
201: FGKNQCQFIM DRLYNFSNTG LPDPTLNTTY LQTLRGQCPR NGNQTVLVDF DLRTPTVFDN KYYVNLKELK GLIQTDQELF SSPNATDTIP LVREYADGTQ
301: KFFNAFVEAM NRMGNITPLT GTQGQIRQNC RVVNSNSLLH DVVEIVDFVS SM
Arabidopsis Description
PER32Peroxidase 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHB9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.