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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d040364_P001 Maize extracellular 96.71 97.0
Os01t0263300-01 Rice extracellular 89.82 89.55
TraesCS3A01G180100.1 Wheat extracellular 87.72 89.33
TraesCS3D01G185200.1 Wheat extracellular, plasma membrane, vacuole 88.62 88.89
HORVU3Hr1G036820.1 Barley extracellular 88.92 88.66
TraesCS3D01G184900.1 Wheat extracellular 88.92 88.66
HORVU3Hr1G036880.4 Barley extracellular, plasma membrane, vacuole 88.32 88.59
TraesCS3B01G210000.1 Wheat extracellular 88.32 88.59
TraesCS3B01G209700.1 Wheat extracellular 88.62 88.36
TraesCS3D01G185000.1 Wheat extracellular 88.62 88.36
Zm00001d008299_P001 Maize extracellular 90.12 88.27
TraesCS3A01G180300.1 Wheat extracellular, plasma membrane, vacuole 87.72 87.99
EES00525 Sorghum extracellular 88.32 87.8
TraesCS3B01G209800.1 Wheat extracellular 88.02 87.76
TraesCS3B01G209900.1 Wheat extracellular 88.02 87.76
TraesCS3D01G185100.1 Wheat extracellular 87.43 87.16
TraesCS3A01G180200.1 Wheat extracellular 87.43 87.16
TraesCS3A01G180000.2 Wheat extracellular 88.02 80.99
HORVU3Hr1G036790.1 Barley plasma membrane 89.22 79.05
Solyc02g084800.2.1 Tomato cytosol, extracellular, nucleus, plastid 61.08 74.73
GSMUA_Achr4P13310_001 Banana extracellular 68.86 74.43
KRH76737 Soybean extracellular, mitochondrion 73.05 73.72
KRH28727 Soybean extracellular, nucleus 72.75 73.41
GSMUA_Achr4P06420_001 Banana extracellular 66.77 72.4
GSMUA_Achr3P20750_001 Banana extracellular 65.87 72.37
Solyc02g062510.2.1 Tomato extracellular 70.36 71.0
EES00880 Sorghum extracellular 72.16 70.26
GSMUA_Achr1P25400_001 Banana endoplasmic reticulum, extracellular 64.37 70.26
PGSC0003DMT400040062 Potato extracellular, golgi 68.86 69.49
Solyc02g084790.2.1 Tomato extracellular 68.86 69.28
Solyc02g084780.2.1 Tomato endoplasmic reticulum, extracellular 68.56 68.98
CDY45216 Canola extracellular 69.16 68.55
CDX81401 Canola extracellular 68.86 68.25
Bra037176.1-P Field mustard extracellular 68.86 68.25
VIT_04s0023g02570.t01 Wine grape extracellular 67.66 68.07
Bra012061.1-P Field mustard extracellular 62.87 67.74
KRH69854 Soybean extracellular, nucleus 67.07 67.67
CDY65385 Canola extracellular 67.96 67.36
KRH08162 Soybean extracellular 66.17 66.77
AT5G66390.1 Thale cress extracellular 66.77 66.37
HORVU3Hr1G036860.2 Barley plastid 73.05 66.3
PGSC0003DMT400058061 Potato extracellular 65.87 66.07
Bra017761.1-P Field mustard extracellular 65.27 65.86
CDX69223 Canola extracellular 65.27 65.86
CDX75574 Canola extracellular 64.97 65.56
CDY64926 Canola extracellular 64.67 65.26
Bra011681.1-P Field mustard extracellular 64.67 65.26
CDY25140 Canola extracellular 65.27 64.88
CDY25139 Canola extracellular 65.27 64.88
Solyc03g033710.2.1 Tomato extracellular 64.67 64.86
CDY59700 Canola extracellular 63.77 64.74
CDY46313 Canola extracellular 64.97 64.58
AT2G18150.1 Thale cress extracellular 65.27 64.5
Bra039920.1-P Field mustard extracellular 64.37 63.99
AT4G36430.1 Thale cress extracellular 62.57 63.14
Solyc03g033690.1.1 Tomato extracellular 62.28 63.03
EES10805 Sorghum extracellular 65.27 62.46
AT2G18140.1 Thale cress extracellular 61.68 61.13
Bra041169.1-P Field mustard cytosol 19.76 60.0
CDX77970 Canola extracellular 58.68 58.16
Bra036842.1-P Field mustard extracellular 58.38 57.86
CDX73762 Canola extracellular 57.78 57.27
AT3G50990.1 Thale cress extracellular, plastid, vacuole 58.98 57.27
KRH08164 Soybean endoplasmic reticulum, plasma membrane 59.28 56.41
EES02729 Sorghum extracellular 55.09 53.03
EER92588 Sorghum extracellular 49.7 50.0
EER92589 Sorghum extracellular 48.5 48.07
PGSC0003DMT400058134 Potato extracellular 63.77 47.87
EER91558 Sorghum extracellular 46.11 47.24
EER95209 Sorghum extracellular 46.11 46.53
EER91824 Sorghum extracellular 47.01 46.45
OQU78052 Sorghum extracellular 44.01 45.51
EES18269 Sorghum extracellular 44.31 45.4
EES18267 Sorghum vacuole 43.71 45.34
EES18270 Sorghum vacuole 43.11 45.0
EES19563 Sorghum extracellular 42.81 44.83
EES18268 Sorghum extracellular 43.71 44.79
EES18266 Sorghum extracellular, plastid 43.11 44.72
OQU76227 Sorghum extracellular 45.51 44.19
EES13656 Sorghum extracellular 47.9 43.01
OQU89643 Sorghum extracellular, golgi 43.11 42.35
Bra011683.1-P Field mustard mitochondrion 64.37 29.74
CDX75576 Canola mitochondrion 63.47 25.39
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:21.6.2.3EntrezGene:8085826UniProt:C5XGH3
EnsemblPlants:EES00526ProteinID:EES00526ProteinID:EES00526.1GO:GO:0003674GO:GO:0003824GO:GO:0004601
GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0006950GO:GO:0006979GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016491GO:GO:0020037GO:GO:0042744
GO:GO:0046872GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016
PFAM:PF00141PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873
PANTHER:PTHR31388PANTHER:PTHR31388:SF54MetaCyc:PWY-5461MetaCyc:PWY-5466MetaCyc:PWY-5469MetaCyc:PWY-6824
MetaCyc:PWY-7214MetaCyc:PWY-7445InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSEnsemblPlantsGene:SORBI_3003G121100
SUPFAM:SSF48113unigene:Sbi.3808InterPro:Secretory_peroxidaseSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A849EC
RefSeq:XP_002455406.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:+:11041232..11043372
Molecular Weight (calculated)
35824.8 Da
IEP (calculated)
8.323
GRAVY (calculated)
-0.029
Length
334 amino acids
Sequence
(BLAST)
001: MTTSMGSLVL LCLVSTLLFP SAVLGHPWGG LFPQFYDHSC PKAKEIVQSI VAQAVAKETR MAASLVRLHF HDCFVKGCDA SVLLDNSSSI VSEKGSNPNR
101: NSLRGFEVVD QIKAALEAAC PGTVSCADIL ALAARDSTSL VGGPYWDVPL GRRDSLGASI QGSNNDIPAP NNTLPTIITK FKRQGLNVVD VVALSGGHTI
201: GMSRCTSFRQ RLYNQTGNGM ADSTLDVSYA AQLRQGCPRS GGDNNLFPLD FVTPAKFDNF YYKNLLAGKG LLSSDEVLLT KSAETAALVK AYAADVNLFF
301: QHFAQSMVNM GNISPLTGSQ GEIRKNCRRL NNSH
Best Arabidopsis Sequence Match ( AT5G66390.1 )
(BLAST)
001: MAKSLNILIA ALSLIAFSPF CLCSKAYGSG GYLFPQFYDQ SCPKAQEIVQ SIVAKAFEHD PRMPASLLRL HFHDCFVKGC DASILLDSSG TIISEKRSNP
101: NRNSARGFEL IEEIKHALEQ ECPETVSCAD ILALAARDST VITGGPSWEV PLGRRDARGA SLSGSNNDIP APNNTFQTIL TKFKRQGLDL VDLVSLSGSH
201: TIGNSRCTSF RQRLYNQSGN GKPDMTLSQY YATLLRQRCP RSGGDQTLFF LDFATPFKFD NHYFKNLIMY KGLLSSDEIL FTKNKQSKEL VELYAENQEA
301: FFEQFAKSMV KMGNISPLTG AKGEIRRICR RVNHAY
Arabidopsis Description
PER72Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WT45]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.