Factsheet for TraesCS3D01G184900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 19786127

msms PMID: 19786127 doi

FJ Kong, A Oyanagi, S Komatsu

National Institute of Crop Science, Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G209700.1	Wheat	extracellular	98.21	98.21
TraesCS3D01G185000.1	Wheat	extracellular	96.12	96.12
TraesCS3D01G185100.1	Wheat	extracellular	93.73	93.73
TraesCS3D01G185200.1	Wheat	extracellular, plasma membrane, vacuole	91.34	91.89
TraesCS3A01G180000.2	Wheat	extracellular	96.42	88.98
EES00526	Sorghum	extracellular	88.66	88.92
Os01t0263300-01	Rice	extracellular	88.66	88.66
Zm00001d040364_P001	Maize	extracellular	87.76	88.29
HORVU3Hr1G036790.1	Barley	plasma membrane	98.51	87.53
Zm00001d008299_P001	Maize	extracellular	84.18	82.7
GSMUA_Achr4P13310_001	Banana	extracellular	68.96	74.76
Solyc02g084800.2.1	Tomato	cytosol, extracellular, nucleus, plastid	60.0	73.63
GSMUA_Achr4P06420_001	Banana	extracellular	66.57	72.4
GSMUA_Achr3P20750_001	Banana	extracellular	65.07	71.71
Solyc02g062510.2.1	Tomato	extracellular	70.75	71.6
KRH76737	Soybean	extracellular, mitochondrion	70.45	71.3
KRH28727	Soybean	extracellular, nucleus	70.15	71.0
GSMUA_Achr1P25400_001	Banana	endoplasmic reticulum, extracellular	63.88	69.93
PGSC0003DMT400040062	Potato	extracellular, golgi	68.96	69.79
VIT_04s0023g02570.t01	Wine grape	extracellular	68.96	69.58
CDY45216	Canola	extracellular	69.25	68.84
Solyc02g084790.2.1	Tomato	extracellular	68.06	68.67
Bra037176.1-P	Field mustard	extracellular	68.96	68.55
Solyc02g084780.2.1	Tomato	endoplasmic reticulum, extracellular	67.76	68.37
PGSC0003DMT400058061	Potato	extracellular	67.76	68.17
Bra012061.1-P	Field mustard	extracellular	62.99	68.06
TraesCS6D01G284700.1	Wheat	extracellular	67.76	67.96
CDY65385	Canola	extracellular	68.36	67.95
CDX81401	Canola	extracellular	68.36	67.95
KRH08162	Soybean	extracellular	66.27	67.07
KRH69854	Soybean	extracellular, nucleus	66.27	67.07
Solyc03g033710.2.1	Tomato	extracellular	66.57	66.97
AT5G66390.1	Thale cress	extracellular	67.16	66.96
Bra017761.1-P	Field mustard	extracellular	65.07	65.86
CDX69223	Canola	extracellular	65.07	65.86
CDX75574	Canola	extracellular	65.07	65.86
Bra011681.1-P	Field mustard	extracellular	64.78	65.56
CDY64926	Canola	extracellular	64.48	65.26
CDY59700	Canola	extracellular	63.58	64.74
Solyc03g033690.1.1	Tomato	extracellular	63.28	64.24
AT2G18150.1	Thale cress	extracellular	64.78	64.2
TraesCS2D01G299700.1	Wheat	extracellular	64.78	63.64
Bra039920.1-P	Field mustard	extracellular	63.58	63.39
CDY25139	Canola	extracellular	63.58	63.39
CDY25140	Canola	extracellular	63.58	63.39
CDY46313	Canola	extracellular	63.58	63.39
AT4G36430.1	Thale cress	extracellular	62.39	63.14
AT2G18140.1	Thale cress	extracellular	61.19	60.83
Bra041169.1-P	Field mustard	cytosol	19.7	60.0
CDX77970	Canola	extracellular	58.21	57.86
Bra036842.1-P	Field mustard	extracellular	57.91	57.57
AT3G50990.1	Thale cress	extracellular, plastid, vacuole	58.51	56.98
CDX73762	Canola	extracellular	57.31	56.97
KRH08164	Soybean	endoplasmic reticulum, plasma membrane	58.81	56.13
TraesCS3D01G184800.1	Wheat	extracellular	52.54	50.57
PGSC0003DMT400058134	Potato	extracellular	64.78	48.76
TraesCS4D01G233900.1	Wheat	extracellular	47.76	48.63
TraesCS1D01G402200.1	Wheat	cytosol	34.93	47.56
TraesCS4D01G234000.1	Wheat	extracellular	47.46	47.32
TraesCS3D01G407000.1	Wheat	extracellular	44.48	46.42
TraesCS3D01G407100.1	Wheat	extracellular	44.48	46.42
TraesCS3D01G407200.1	Wheat	extracellular	44.18	46.11
TraesCS3D01G406900.1	Wheat	extracellular	44.18	45.82
TraesCS7D01G212900.1	Wheat	extracellular	45.37	45.51
TraesCS4D01G234200.1	Wheat	extracellular	45.67	45.4
TraesCS5D01G330300.1	Wheat	extracellular	46.57	44.83
TraesCS1D01G096300.1	Wheat	extracellular	44.18	44.71
TraesCS1D01G096200.1	Wheat	extracellular	44.18	44.71
TraesCS7D01G417400.1	Wheat	unclear	44.48	43.19
TraesCS1D01G096400.1	Wheat	extracellular	42.69	42.06
TraesCS5D01G256400.1	Wheat	extracellular	42.99	41.98
Bra011683.1-P	Field mustard	mitochondrion	63.58	29.46
CDX75576	Canola	mitochondrion	62.69	25.15

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:21.6.2.3	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF54	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G184900
EnsemblPlants:TraesCS3D01G184900.1	TIGR:cd00693	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:-:170557305..170558776

Molecular Weight (calculated)

35872.0 Da

IEP (calculated)

8.270

GRAVY (calculated)

0.023

Length

335 amino acids

Sequence
(BLAST)

001: MATSMGCLVA LCLVSPLLLA GAVHGNPGYG GLFPQFYDHS CPKAKEIVHS IVAQAVARET RMAASLVRLH FHDCFVKGCD ASVLLDNSTN IVSEKGSNPN
101: RNSIRGFEVV DEIKVALETA CPGTVSCADI LALAARDSTI LVGGPYWEVP LGRRDSLGAS IQGSNNDIPA PNNTLPTIIT KFKRLGLNLV DVVALSGGHT
201: IGLSRCTSFR QRLYNQSGNG LADGTLDVSF AAQLRQGCPR SGGDNNLFPL DAVTSTKFDN FYFKNILAGR GLLSSDEVLL TKSAETAALV KAYANDVHLF
301: FQHFAQSMVN MGNISPLTGS KGEIRKNCRR LNNFH

Best Arabidopsis Sequence Match ( AT5G66390.1 )
(BLAST)

001: MAKSLNILIA ALSLIAFSPF CLCSKAYGSG GYLFPQFYDQ SCPKAQEIVQ SIVAKAFEHD PRMPASLLRL HFHDCFVKGC DASILLDSSG TIISEKRSNP
101: NRNSARGFEL IEEIKHALEQ ECPETVSCAD ILALAARDST VITGGPSWEV PLGRRDARGA SLSGSNNDIP APNNTFQTIL TKFKRQGLDL VDLVSLSGSH
201: TIGNSRCTSF RQRLYNQSGN GKPDMTLSQY YATLLRQRCP RSGGDQTLFF LDFATPFKFD NHYFKNLIMY KGLLSSDEIL FTKNKQSKEL VELYAENQEA
301: FFEQFAKSMV KMGNISPLTG AKGEIRRICR RVNHAY

Arabidopsis Description

PER72Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WT45]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.