Factsheet for TraesCS4D01G234000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G076700.1	Wheat	extracellular	95.83	95.83
TraesCS4B01G232800.1	Wheat	extracellular	95.54	95.54
HORVU4Hr1G064950.2	Barley	extracellular	93.75	93.47
Os03t0234900-01	Rice	extracellular	75.3	75.98
EER92589	Sorghum	extracellular	74.11	73.89
Zm00001d028348_P001	Maize	extracellular	73.51	73.51
TraesCS1D01G402200.1	Wheat	cytosol	47.32	64.63
TraesCS4D01G234200.1	Wheat	extracellular	61.01	60.83
TraesCS7D01G417400.1	Wheat	unclear	60.42	58.84
GSMUA_Achr6P11440_001	Banana	extracellular	52.08	58.33
GSMUA_AchrUn_...	Banana	extracellular, vacuole	53.27	57.93
KRH71834	Soybean	extracellular	56.55	57.4
TraesCS1D01G096400.1	Wheat	extracellular	58.04	57.35
KRH38084	Soybean	extracellular	55.65	56.5
KRG95399	Soybean	extracellular	55.06	55.89
Solyc11g072920.1.1	Tomato	extracellular	54.17	55.66
PGSC0003DMT400040186	Potato	extracellular	53.87	55.52
TraesCS3D01G406900.1	Wheat	extracellular	53.27	55.42
CDX98949	Canola	extracellular	54.76	54.44
VIT_06s0004g01190.t01	Wine grape	extracellular	49.4	54.43
AT5G06720.1	Thale cress	extracellular	54.17	54.33
CDX70075	Canola	extracellular	54.46	54.14
Bra009220.1-P	Field mustard	extracellular	54.46	54.14
VIT_08s0007g06650.t01	Wine grape	extracellular, vacuole	53.87	54.03
TraesCS3D01G407000.1	Wheat	extracellular	51.19	53.58
TraesCS3D01G407200.1	Wheat	extracellular	50.89	53.27
Solyc10g078890.1.1	Tomato	extracellular	53.57	53.25
TraesCS3D01G407100.1	Wheat	extracellular	50.3	52.65
KRH67078	Soybean	plastid	55.65	52.23
CDX98950	Canola	extracellular	54.17	50.84
CDX70074	Canola	extracellular	54.17	50.84
Bra009221.1-P	Field mustard	extracellular	54.17	50.84
PGSC0003DMT400082008	Potato	extracellular	48.21	50.0
Solyc01g006290.2.1	Tomato	extracellular	48.51	49.85
Solyc01g006300.2.1	Tomato	extracellular	47.62	49.23
AT5G06730.1	Thale cress	extracellular	52.38	49.16
TraesCS3D01G185000.1	Wheat	extracellular	48.51	48.66
TraesCS3D01G185200.1	Wheat	extracellular, plasma membrane, vacuole	47.62	48.05
TraesCS3D01G185100.1	Wheat	extracellular	47.62	47.76
PGSC0003DMT400081883	Potato	extracellular	43.15	47.54
TraesCS3D01G184900.1	Wheat	extracellular	47.32	47.46
TraesCS4D01G233900.1	Wheat	extracellular	45.83	46.81
TraesCS1D01G096300.1	Wheat	extracellular	45.24	45.92
TraesCS6D01G284700.1	Wheat	extracellular	45.54	45.81
TraesCS1D01G096200.1	Wheat	extracellular	43.45	44.11
TraesCS2D01G299700.1	Wheat	extracellular	44.35	43.7
TraesCS5D01G330300.1	Wheat	extracellular	43.75	42.24
TraesCS5D01G256400.1	Wheat	extracellular	42.86	41.98
TraesCS7D01G212900.1	Wheat	extracellular	40.18	40.42
TraesCS3D01G184800.1	Wheat	extracellular	41.37	39.94

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF43	InterPro:Peroxidase_pln	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G234000	EnsemblPlants:TraesCS4D01G234000.1	TIGR:cd00693
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:394361547..394363316

Molecular Weight (calculated)

35984.9 Da

IEP (calculated)

9.306

GRAVY (calculated)

-0.163

Length

336 amino acids

Sequence
(BLAST)

001: MVRGIHYGGA CAVLLAVAVA LGLGARGGAA QLDDKFYDGS CPGVHKVVRR VLREAHKADV RIYASLTRLH FHDCFVQGCD GSILLDNSTS IVSEKYAKPN
101: NNSVRGFTVV DDVKAALEKA CPGVVSCADI LTIAAKVSVE LSGGPRWRVQ LGRRDGTTAN LTAANSLLPS PRNNLTMLQR KFAAVGLDDT DLVALSGAHT
201: FGRAQCQFVT DRLYNFSKTG MPDPTLDGSY RAQLAGSCPR RHGNRSALND LDTTTPDAFD KNYFTNLQGN RGFLQSDQEL LAVPGATTAA IVGRFASDEK
301: AFFRSFAAAM INMGNIKPLT GGQGEVRRNC RRVNGS

Best Arabidopsis Sequence Match ( AT5G06720.1 )
(BLAST)

001: MAVTNLPTCD GLFIISLIVI VSSIFGTSSA QLNATFYSGT CPNASAIVRS TIQQALQSDT RIGASLIRLH FHDCFVNGCD ASILLDDTGS IQSEKNAGPN
101: VNSARGFNVV DNIKTALENA CPGVVSCSDV LALASEASVS LAGGPSWTVL LGRRDSLTAN LAGANSSIPS PIESLSNITF KFSAVGLNTN DLVALSGAHT
201: FGRARCGVFN NRLFNFSGTG NPDPTLNSTL LSTLQQLCPQ NGSASTITNL DLSTPDAFDN NYFANLQSND GLLQSDQELF STTGSSTIAI VTSFASNQTL
301: FFQAFAQSMI NMGNISPLTG SNGEIRLDCK KVNGS

Arabidopsis Description

PER53Peroxidase 53 [Source:UniProtKB/Swiss-Prot;Acc:Q42578]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.