Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plasma membrane 3
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34452 | Canola | cytosol, extracellular | 78.32 | 77.97 |
| CDY32236 | Canola | cytosol, extracellular | 76.99 | 76.65 |
| AT5G55990.1 | Thale cress | cytosol, extracellular | 70.35 | 70.35 |
| AT4G26570.2 | Thale cress | cytosol | 69.47 | 68.26 |
| AT4G26560.1 | Thale cress | nucleus | 49.12 | 51.87 |
| AT5G47100.1 | Thale cress | cytosol | 48.67 | 51.64 |
| AT5G24270.4 | Thale cress | cytosol | 45.13 | 45.95 |
| AT1G64480.1 | Thale cress | cytosol, mitochondrion | 42.48 | 44.86 |
| AT4G33000.1 | Thale cress | golgi, plastid | 47.79 | 42.19 |
| AT4G17615.3 | Thale cress | cytosol | 45.13 | 40.48 |
| AT4G01420.1 | Thale cress | cytosol | 36.28 | 40.39 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:827330 | ProteinID:AEE83734.1 | EMBL:AF192884 | EMBL:AF339142 |
| EMBL:AK176189 | ProteinID:ANM66942.1 | ArrayExpress:AT4G16350 | EnsemblPlantsGene:AT4G16350 | RefSeq:AT4G16350 | TAIR:AT4G16350 |
| RefSeq:AT4G16350-TAIR-G | EnsemblPlants:AT4G16350.1 | TAIR:AT4G16350.1 | Unigene:At.4408 | ProteinID:CAB10412.1 | ProteinID:CAB78677.1 |
| Symbol:CBL6 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019722 |
| GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_001328805.1 | RefSeq:NP_567492.1 | PFAM:PF13499 | PO:PO:0000256 |
| PO:PO:0000262 | PO:PO:0000293 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0025281 | PRINTS:PR00450 | PFscan:PS50222 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF51 |
| UniProt:Q9C5P6 | SMART:SM00054 | SUPFAM:SSF47473 | SignalP:SignalP-noTM | UniParc:UPI00000AB2AC | : |
Description
CBL6Calcineurin B-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P6]
Coordinates
chr4:-:9242299..9243912
Molecular Weight (calculated)
26030.4 Da
IEP (calculated)
5.651
GRAVY (calculated)
-0.252
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMQCLDGLK HLALILLTCC DADPPKVRQN PKDVARGTVF TVNEIEALYE LFKSISKNGL IDKEQFQLVL FKMNTTRSLF ADRVFDLFDT KNTGILDFEA
101: FARSLSVFHP NAKFEDKIEF SFKLYDLNQQ GYIKRQEVKQ MVVRTLAESG MNLSDHVIES IIDKTFEEAD TKLDGKIDKE EWRSLVLRHP SLLQNMSLQH
201: LKDVTKTFPN FVFHTIVTDT PSELDG
101: FARSLSVFHP NAKFEDKIEF SFKLYDLNQQ GYIKRQEVKQ MVVRTLAESG MNLSDHVIES IIDKTFEEAD TKLDGKIDKE EWRSLVLRHP SLLQNMSLQH
201: LKDVTKTFPN FVFHTIVTDT PSELDG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.