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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
iPSORT:plastid
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80756 Canola cytosol 81.09 87.89
CDY11185 Canola cytosol 80.23 86.96
Bra005672.1-P Field mustard cytosol 80.23 86.96
VIT_08s0058g00650.t01 Wine grape cytosol 69.05 74.84
PGSC0003DMT400030366 Potato cytosol 65.04 71.16
Solyc09g015070.2.1 Tomato cytosol 64.18 70.22
KRH00349 Soybean cytosol 64.47 70.09
KRH40836 Soybean cytosol 63.32 68.63
KXG22204 Sorghum cytosol 61.6 67.4
TraesCS1D01G293000.1 Wheat cytosol 61.6 67.19
TraesCS1B01G307700.1 Wheat golgi 61.03 66.56
GSMUA_Achr10P... Banana cytosol 61.03 65.74
TraesCS1A01G298200.1 Wheat cytosol 46.7 59.27
HORVU1Hr1G070310.10 Barley cytosol, peroxisome, plastid 57.02 56.7
AT2G37770.2 Thale cress cytosol, peroxisome, plastid 40.4 44.76
AT2G37790.1 Thale cress cytosol 38.4 42.68
AT2G37760.1 Thale cress cytosol 36.96 41.48
AT3G53880.1 Thale cress cytosol 37.25 41.27
AT5G62420.1 Thale cress cytosol, mitochondrion, nucleus, peroxisome 35.24 38.92
AT1G59950.1 Thale cress endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 33.52 36.56
AT2G21250.1 Thale cress cytosol 32.09 36.25
AT1G59960.1 Thale cress cytosol, mitochondrion, peroxisome, plastid 33.81 36.2
AT2G21260.1 Thale cress cytosol 31.52 35.6
Protein Annotations
Gene3D:3.20.20.100MapMan:50.1.1EntrezGene:831701ProteinID:AED90375.1ArrayExpress:AT5G01670EnsemblPlantsGene:AT5G01670
RefSeq:AT5G01670TAIR:AT5G01670RefSeq:AT5G01670-TAIR-GEnsemblPlants:AT5G01670.2TAIR:AT5G01670.2InterPro:Aldo/ket_reductase_CS
InterPro:Aldo/keto_reductaseUniProt:F4K9G7GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114InterPro:IPR036812InterPro:NADP_OxRdtase_domInterPro:NADP_OxRdtase_dom_sfRefSeq:NP_850750.1
PFAM:PF00248PIRSF:PIRSF000097PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007095
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0020100
PO:PO:0020137PO:PO:0025022PRINTS:PR00069ScanProsite:PS00062ScanProsite:PS00063ScanProsite:PS00798
PANTHER:PTHR11732PANTHER:PTHR11732:SF164SUPFAM:SSF51430UniParc:UPI0000196B17::
Description
NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K9G7]
Coordinates
chr5:+:251686..253972
Molecular Weight (calculated)
39656.8 Da
IEP (calculated)
7.622
GRAVY (calculated)
-0.363
Length
349 amino acids
Sequence
(BLAST)
001: MAHATFTSEG QNMESFRLLS GHKIPAVGLG TWRSGSQAAH AVVTAIVEGG YRHIDTAWEY GDQREVGQGI KRAMHAGLER RDLFVTSKLW YTLILRKMIN
101: LSSPLMNVLV GTCLNKRCTE LSPERVRPAL QNTLKELQLE YLDLYLIHWP IRLREGASKP PKAGDVLDFD MEGVWREMEN LSKDSLVRNI GVCNFTVTKL
201: NKLLGFAELI PAVCQMEMHP GWRNDRILEF CKKNEIHVTA YSPLGSQEGG RDLIHDQTVD RIAKKLNKTP GQILVKWGLQ RGTSVIPKSL NPERIKENIK
301: VFDWVIPEQD FQALNSITDQ KRVIDGEDLF VNKTEGPFRS VADLWDHED
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.