Factsheet for TraesCS1B01G307700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G293000.1	Wheat	cytosol	98.12	98.12
KXG22204	Sorghum	cytosol	90.0	90.28
TraesCS1A01G298200.1	Wheat	cytosol	71.88	83.64
HORVU1Hr1G070310.10	Barley	cytosol, peroxisome, plastid	84.69	77.21
PGSC0003DMT400030366	Potato	cytosol	69.06	69.28
VIT_08s0058g00650.t01	Wine grape	cytosol	69.06	68.63
Solyc09g015070.2.1	Tomato	cytosol	68.12	68.34
CDX80756	Canola	cytosol	65.62	65.22
KRH00349	Soybean	cytosol	65.31	65.11
KRH40836	Soybean	cytosol	65.0	64.6
Bra005672.1-P	Field mustard	cytosol	64.69	64.29
CDY11185	Canola	cytosol	64.69	64.29
GSMUA_Achr10P...	Banana	cytosol	64.38	63.58
AT5G01670.2	Thale cress	cytosol	66.56	61.03
TraesCS3B01G395600.1	Wheat	golgi	45.0	46.3
TraesCS1B01G291500.1	Wheat	cytosol	44.69	46.28
TraesCS3B01G045400.1	Wheat	cytosol	43.44	44.84
TraesCS1B01G025100.2	Wheat	cytosol	43.44	44.69
TraesCS3B01G395700.1	Wheat	plastid	41.88	43.93
TraesCS1B01G027200.1	Wheat	mitochondrion	42.5	43.87
TraesCS1B01G026600.2	Wheat	mitochondrion	42.19	43.55
TraesCS1B01G291400.1	Wheat	plastid	42.5	43.45
TraesCS7B01G136900.1	Wheat	plastid	40.94	43.09
TraesCS1B01G028300.1	Wheat	cytosol	23.12	43.02
TraesCS1B01G291200.1	Wheat	cytosol	41.88	42.81
TraesCS3B01G038800.1	Wheat	cytosol	40.94	41.07
TraesCS1B01G291100.1	Wheat	cytosol	39.38	40.51
TraesCS6B01G106100.1	Wheat	cytosol	39.06	40.06
TraesCS2B01G023500.1	Wheat	cytosol	39.38	38.65
TraesCS2B01G333900.1	Wheat	cytosol	39.38	38.53
TraesCS1B01G027700.2	Wheat	cytosol, peroxisome, plastid	42.19	38.46
TraesCS2B01G547800.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	36.25	36.02
TraesCS7B01G268400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	19.06	35.47
TraesCS2B01G333800.1	Wheat	plastid	36.56	31.79

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00063
ScanProsite:PS00798	PANTHER:PTHR11732	PANTHER:PTHR11732:SF164	SUPFAM:SSF51430	EnsemblPlantsGene:TraesCS1B01G307700	EnsemblPlants:TraesCS1B01G307700.1
TIGR:cd06660	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:530479847..530481997

Molecular Weight (calculated)

35946.1 Da

IEP (calculated)

7.143

GRAVY (calculated)

-0.486

Length

320 amino acids

Sequence
(BLAST)

001: MASAKATMGQ EKQDHFVLKS GHAMPAVGLG TWRAGSDTAH SVQTAITEAG YRHVDTAAEY GVEKEVGKGL RAAMEAGIDR KDLFVTSKLW CTNLVPERVR
101: PALESTLKDL QLDYIDLYHI HWPFRLKDGA HKPPEAGEVL EFDMEGVWKE MENLVKDGLV KDIGVCNYTV TKLDRLLRSA KIPPAVCQME MHPGWKNDKM
201: FEACKKRGIH VTAYSPLGSS EKNLAHDPVV EKVANKLNKT PGQVLIRWAL QRGTSVIPKS SKDERIKENI QVFGWEIPEE DFKVLCSIKD EKRVLTGEEL
301: FVNKTHGPYK SASEVWDHEN

Best Arabidopsis Sequence Match ( AT5G01670.1 )
(BLAST)

001: MAHATFTSEG QNMESFRLLS GHKIPAVGLG TWRSGSQAAH AVVTAIVEGG YRHIDTAWEY GDQREVGQGI KRAMHAGLER RDLFVTSKLW CTELSPERVR
101: PALQNTLKEL QLEYLDLYLI HWPIRLREGA SKPPKAGDVL DFDMEGVWRE MENLSKDSLV RNIGVCNFTV TKLNKLLGFA ELIPAVCQME MHPGWRNDRI
201: LEFCKKNEIH VTAYSPLGSQ EGGRDLIHDQ TVDRIAKKLN KTPGQILVKW GLQRGTSVIP KSLNPERIKE NIKVFDWVIP EQDFQALNSI TDQKRVIDGE
301: DLFVNKTEGP FRSVADLWDH ED

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K9G7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.