Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035603.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid, vacuole | 71.33 | 81.68 |
| CDY64986 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 71.33 | 81.68 |
| CDY06525 | Canola | cytosol, plasma membrane, vacuole | 67.33 | 77.69 |
Protein Annotations
| MapMan:35.2 | EntrezGene:835709 | UniProt:A0A178UG17 | ProteinID:AED96721.1 | ArrayExpress:AT5G56100 | EnsemblPlantsGene:AT5G56100 |
| RefSeq:AT5G56100 | TAIR:AT5G56100 | RefSeq:AT5G56100-TAIR-G | EnsemblPlants:AT5G56100.1 | TAIR:AT5G56100.1 | EMBL:AY062572 |
| EMBL:AY093361 | ProteinID:BAB09292.1 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_200421.1 | ProteinID:OAO92062.1 |
| InterPro:Oleosin | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR33203 |
| PANTHER:PTHR33203:SF6 | UniProt:Q9FKT7 | TMHMM:TMhelix | UniParc:UPI00000A41A9 | SEG:seg | : |
Description
Glycine-rich protein / oleosin [Source:UniProtKB/TrEMBL;Acc:Q9FKT7]
Coordinates
chr5:+:22716917..22717849
Molecular Weight (calculated)
15724.2 Da
IEP (calculated)
8.197
GRAVY (calculated)
0.547
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MENPGGRRRR DIAITDGERT TGSSVVAATV AAVAVVGPLF GLMSFSFVAT VTLFLIASPL LLIFAPAFMV TVAVLVSAMV GVGVAAAMWM MGIAALVCCG
101: REIGIETGLA GRMVESVVRE LGYGRSRYLR DKSEDSYSTS SPSSRDYSSS
101: REIGIETGLA GRMVESVVRE LGYGRSRYLR DKSEDSYSTS SPSSRDYSSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.