Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64986 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 89.23 | 88.55 |
| AT5G56100.1 | Thale cress | extracellular, plasma membrane, vacuole | 77.69 | 67.33 |
Protein Annotations
| EnsemblPlants:CDY06525 | EnsemblPlantsGene:GSBRNA2T00122638001 | GO:A0A078EWW0 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Oleosin | PANTHER:PTHR33203 |
| PANTHER:PTHR33203:SF6 | ProteinID:CDY06525 | ProteinID:CDY06525.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EB81E2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC02g12490D
Coordinates
chrLK031971:-:97254..97750
Molecular Weight (calculated)
13605.1 Da
IEP (calculated)
5.019
GRAVY (calculated)
1.021
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIPEGRRDV ARTDGENTTS SSVVFITVAA VAIVGPLVGL MSFSLVATMT LFLIVSPLML IFAPVLMATV AILVAAVVGV GVAAVMWLVG IAALVCCGRE
101: IGVGTGVAER MVESVVRELG YGRSRYFQDK
101: IGVGTGVAER MVESVVRELG YGRSRYFQDK
001: MENPGGRRRR DIAITDGERT TGSSVVAATV AAVAVVGPLF GLMSFSFVAT VTLFLIASPL LLIFAPAFMV TVAVLVSAMV GVGVAAAMWM MGIAALVCCG
101: REIGIETGLA GRMVESVVRE LGYGRSRYLR DKSEDSYSTS SPSSRDYSSS
101: REIGIETGLA GRMVESVVRE LGYGRSRYLR DKSEDSYSTS SPSSRDYSSS
Arabidopsis Description
Glycine-rich protein / oleosin [Source:UniProtKB/TrEMBL;Acc:Q9FKT7]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.