Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU1Hr1G037870.1 Barley cytosol 13.81 87.5
Solyc11g051170.1.1 Tomato nucleus 13.61 75.82
TraesCS5A01G207900.1 Wheat mitochondrion 23.08 51.77
ATMG01190.1 Thale cress cytosol 49.9 49.9
AT2G07698.1 Thale cress endoplasmic reticulum 50.1 32.69
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14MapMan:1.1.9.2.1Gene3D:1.20.150.20Gene3D:2.40.30.20Gene3D:3.40.50.300
EntrezGene:844790UniProt:A0A1B1W4S8ProteinID:ANW47776.1ArrayExpress:ATCG00120EnsemblPlantsGene:ATCG00120RefSeq:ATCG00120
TAIR:ATCG00120RefSeq:ATCG00120-TAIR-GEnsemblPlants:ATCG00120.1TAIR:ATCG00120.1Symbol:ATPAInterPro:ATP_synth_F1_a
InterPro:ATP_synth_F1_asuInterPro:ATP_synth_asu-like_sfInterPro:ATP_synth_asu_CInterPro:ATP_synth_asu_C_sfInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sf
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_a/bsu_ASProteinID:BAA84370.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0006811
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009058GO:GO:0009409
GO:GO:0009507GO:GO:0009534GO:GO:0009535GO:GO:0009536GO:GO:0009579GO:GO:0009605
GO:GO:0009607GO:GO:0009628GO:GO:0009987GO:GO:0010287GO:GO:0010319GO:GO:0015986
GO:GO:0015992GO:GO:0016020GO:GO:0016787GO:GO:0031977GO:GO:0032559GO:GO:0042742
GO:GO:0045261GO:GO:0046034GO:GO:0046933GO:GO:0099132GO:GO:1902600InterPro:IPR023366
InterPro:IPR038376HAMAP:MF_01346RefSeq:NP_051044.1InterPro:P-loop_NTPaseUniProt:P56757PFAM:PF00006
PFAM:PF00306PFAM:PF02874PIRSF:PIRSF039088ScanProsite:PS00152PANTHER:PTHR42875SUPFAM:SSF47917
SUPFAM:SSF50615SUPFAM:SSF52540TIGRFAMs:TIGR00962UniParc:UPI00001263DA::
Description
ATPAATP synthase subunit alpha, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4S8]
Coordinates
chrPt:-:9938..11461
Molecular Weight (calculated)
55331.7 Da
IEP (calculated)
4.898
GRAVY (calculated)
-0.048
Length
507 amino acids
Sequence
(BLAST)
001: MVTIRADEIS NIIRERIEQY NREVTIVNTG TVLQVGDGIA RIYGLDEVMA GELVEFEEGT IGIALNLESN NVGVVLMGDG LMIQEGSSVK ATGKIAQIPV
101: SEAYLGRVIN ALANPIDGRG KISASESRLI ESPAPGIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQQGQ NVICVYVAIG
201: QKASSVAQVV TSLQERGAME YTIVVAETAD SPATLQYLAP YTGAALAEYF MYREQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLSSQLG EGSMTALPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFSQFS
401: SDLDKATQNQ LARGQRLREL LKQSQSAPLT VEEQIMTIYT GTNGYLDGLE IGQVRKFLVQ LRTYLKTNKP QFQEIIASTK TLTAEAESFL KEGIQEQLER
501: FLLQEKV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.