Factsheet for Bra001878.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92950	Canola	extracellular	96.15	96.15
Bra001880.1-P	Field mustard	extracellular	56.15	60.33
AT4G16500.1	Thale cress	extracellular	43.85	48.72
Bra038475.1-P	Field mustard	extracellular	42.31	47.41
Bra040651.1-P	Field mustard	extracellular	40.0	46.85
Bra038478.1-P	Field mustard	extracellular	33.85	40.0
Bra012712.1-P	Field mustard	extracellular	34.62	39.82
Bra038474.1-P	Field mustard	cytosol	26.15	35.05
Bra038477.1-P	Field mustard	cytosol	26.92	35.0
Bra038479.1-P	Field mustard	cytosol	16.15	33.87

Protein Annotations

Gene3D:3.10.450.10	MapMan:35.2	EnsemblPlantsGene:Bra001878	EnsemblPlants:Bra001878.1	EnsemblPlants:Bra001878.1-P	InterPro:Cystatin
InterPro:Cystatin_dom	GO:GO:0003674	GO:GO:0004869	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010466	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414	UniProt:M4CCE8
PFAM:PD001231	PFAM:PF16845	PANTHER:PTHR11413	PANTHER:PTHR11413:SF65	SMART:SM00043	SUPFAM:SSF54403
SignalP:SignalP-noTM	UniParc:UPI00025406D0	SEG:seg	:	:	:

Description

AT4G16500 (E=9e-014) | cysteine protease inhibitor family protein / cystatin family protein

Coordinates

chrA03:+:19114470..19114862

Molecular Weight (calculated)

14590.8 Da

IEP (calculated)

7.506

GRAVY (calculated)

0.093

Length

130 amino acids

Sequence
(BLAST)

001: MKSLICLSLI LLPLFSVVEG QGIGSPTRKE VDEEVVVLAL FAVSEHNRQS KANLVYINVI QETMQVVHGL LYRLIISAEN DSRAAKNYEA VVWEKPQGQG
101: HHSNVLVSFK ECRSVAFVNR LKMYECTPMS

Best Arabidopsis Sequence Match ( AT4G16500.1 )
(BLAST)

001: MMMKSLICLS LILLPLVSVV EGLGGGGGLG SRKPIKNVSD PDVVAVAKYA IEEHNKESKE KLVFVKVVEG TTQVVSGTKY DLKIAAKDGG GKIKNYEAVV
101: VEKLWLHSKS LESFKAL

Arabidopsis Description

CYS4Cysteine proteinase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84WT8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.