Factsheet for Bra040651.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, mitochondrion, peroxisome, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65601	Canola	extracellular	99.1	99.1
Bra038475.1-P	Field mustard	extracellular	76.58	73.28
AT4G16500.1	Thale cress	extracellular	70.27	66.67
Bra038479.1-P	Field mustard	cytosol	36.04	64.52
Bra038478.1-P	Field mustard	extracellular	61.26	61.82
Bra038477.1-P	Field mustard	cytosol	48.65	54.0
Bra012712.1-P	Field mustard	extracellular	49.55	48.67
Bra038474.1-P	Field mustard	cytosol	42.34	48.45
Bra001880.1-P	Field mustard	extracellular	51.35	47.11
Bra001878.1-P	Field mustard	extracellular	46.85	40.0

Protein Annotations

Gene3D:3.10.450.10	MapMan:35.1	EnsemblPlantsGene:Bra040651	EnsemblPlants:Bra040651.1	EnsemblPlants:Bra040651.1-P	InterPro:Cystatin
InterPro:Cystatin_dom	GO:GO:0003674	GO:GO:0004869	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010466	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414	UniProt:M4FHS3
PFAM:PD001231	PFAM:PF16845	PANTHER:PTHR11413	PANTHER:PTHR11413:SF65	SMART:SM00043	SUPFAM:SSF54403
SignalP:SignalP-noTM	UniParc:UPI000253E6EC	SEG:seg	:	:	:

Description

AT4G16500 (E=6e-032) | cysteine protease inhibitor family protein / cystatin family protein

Coordinates

chrScaffold000228:+:15086..15421

Molecular Weight (calculated)

12243.0 Da

IEP (calculated)

9.429

GRAVY (calculated)

0.046

Length

111 amino acids

Sequence
(BLAST)

001: MMKSLVCLSL ILLPLIAVVE GNLGGWKKID NLSDPNVVSL AKYAVDEHNK QSKANLVFVK IVEGKEQVIN GKKYDLKIAA KDGGGVTKNY EAVVVERVWA
101: HYRSLESFQA V

Best Arabidopsis Sequence Match ( AT4G16500.2 )
(BLAST)

001: MMMKSLICLS LILLPLVSVV EGLGGGGGLG SRKPIKNVSD PDVVAVAKYA IEEHNKESKE KLVFVKVVEG TTQVVSGTKY DLKIAAKDGG GKIKNYEAVV
101: VEKLWLHSKS LESFKAL

Arabidopsis Description

CYS4Cysteine proteinase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84WT8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.