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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32942 Canola plasma membrane 86.89 87.6
Bra027490.1-P Field mustard peroxisome, plasma membrane, vacuole 96.31 57.6
Bra027491.1-P Field mustard plasma membrane 94.67 51.33
Bra035978.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 96.31 45.11
Bra035977.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 95.08 44.53
Bra027487.1-P Field mustard peroxisome, plasma membrane, vacuole 93.85 43.95
Bra033675.1-P Field mustard plasma membrane 93.85 43.87
AT5G43370.1 Thale cress endoplasmic reticulum, plasma membrane 93.03 43.32
AT5G43360.1 Thale cress plasma membrane 91.8 42.99
AT5G43350.1 Thale cress endoplasmic reticulum, plasma membrane 92.21 42.94
Bra033673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 93.44 42.62
Bra027463.1-P Field mustard plasma membrane 88.11 41.27
Bra027488.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 83.2 39.57
Bra033676.1-P Field mustard plasma membrane 81.56 37.83
Bra035981.1-P Field mustard plasma membrane, vacuole 79.92 36.45
PGSC0003DMT400034874 Potato plasma membrane 77.87 36.19
PGSC0003DMT400034988 Potato plasma membrane 77.87 36.19
Bra005069.1-P Field mustard plasma membrane 76.64 35.08
KRG92314 Soybean cytosol, golgi, plasma membrane 77.05 35.07
Solyc03g005530.1.1 Tomato plasma membrane 75.82 35.04
Solyc03g005560.1.1 Tomato plasma membrane 75.82 35.04
Bra000107.1-P Field mustard plasma membrane 76.64 34.95
Bra005071.1-P Field mustard plasma membrane 72.54 34.91
KRH31705 Soybean mitochondrion 76.23 34.9
Bra017093.1-P Field mustard plasma membrane 76.23 34.83
Bra017275.1-P Field mustard plasma membrane 74.59 34.67
VIT_05s0049g00920.t01 Wine grape plasma membrane 76.23 34.57
KRH69124 Soybean plasma membrane 75.41 34.52
KRH34477 Soybean extracellular 75.82 34.51
Bra005070.1-P Field mustard plasma membrane 75.41 34.46
Bra007090.1-P Field mustard plasma membrane 74.59 34.27
Bra014798.1-P Field mustard plasma membrane 74.59 33.89
Bra022925.1-P Field mustard plasma membrane 75.41 33.76
Bra035976.1-P Field mustard plasma membrane 68.44 32.3
Bra027486.1-P Field mustard plasma membrane 66.8 31.96
VIT_05s0049g00930.t01 Wine grape plasma membrane 77.46 31.4
Bra008260.1-P Field mustard plasma membrane 50.41 22.86
Bra003719.1-P Field mustard plasma membrane 49.59 22.66
Bra015745.1-P Field mustard golgi, plasma membrane 48.36 22.52
Bra016446.1-P Field mustard plasma membrane 50.0 22.51
Bra025850.1-P Field mustard plasma membrane 49.18 22.14
Bra015748.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 49.18 20.62
Os01t0741300-00 Rice mitochondrion 0.41 0.9
Os04t0508751-00 Rice mitochondrion 0.41 0.9
Bra027492.1-P Field mustard golgi, plasma membrane, vacuole 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1EnsemblPlantsGene:Bra035979EnsemblPlants:Bra035979.1EnsemblPlants:Bra035979.1-P
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846UniProt:M4F4H9InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850PANTHER:PTHR24064PANTHER:PTHR24064:SF414
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000253E654:::
Description
AT5G43370 (E=3e-126) APT1, PHT2, PHT1;2 | APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1); carbohydrate transmembrane transporter/ inorganic phosphate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporter
Coordinates
chrScaffold000111:+:183384..187045
Molecular Weight (calculated)
26242.5 Da
IEP (calculated)
9.500
GRAVY (calculated)
0.549
Length
244 amino acids
Sequence
(BLAST)
001: MAEQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RLYYFNPLSE KPGSLPPHVA AAVNGVALCG TLAGQLFFGW LGDKLGRKKV
101: YGITLIMMIV CSVASGLSFG NKAKGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGVGILAGG FVALAVSSIF DKKFPAPTYA
201: VNRALSTPPQ ADYIWRIIVM FGALPAALTQ KLGQHIEDLI DQNI
Best Arabidopsis Sequence Match ( AT3G54700.1 )
(BLAST)
001: MAGDQLNVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVDGSE KPGTLPPNVS AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG SNPKTVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILTGG IFAIIVSAAF EAKFPAPTYQ
201: IDALASTVPQ ADYVWRIILM VGALPAAMTY YSRSKMPETA RYTALVAKDA KLAASNMSKV LQVEIEAEQQ GTEDKSNSFG LFSKEFMKRH GLHLLGTTST
301: WFLLDIAFYS QNLFQKDIFS AIGWIPPAQT MNAIQEVFKI ARAQTLIALC STVPGYWFTV AFIDVIGRFA IQMMGFFFMT VFMFALAIPY DHWTHKENRI
401: GFVAMYSLTF FFANFGPNAT TFVVPAEIFP ARFRSTCHGI SAASGKLGAM VGAFGFLYLA QSPDKTKTEH GYPPGIGVKN SLIVLGVVNL LGMVFTLLVP
501: ESKGKSLEEM SGENEQNDES SSSSNNNSNN AVSTA
Arabidopsis Description
PHT1-7Probable inorganic phosphate transporter 1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q494P0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.