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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G43350.1 Thale cress endoplasmic reticulum, plasma membrane 98.86 98.86
AT5G43360.1 Thale cress plasma membrane 93.13 93.67
Bra027491.1-P Field mustard plasma membrane 80.15 93.33
CDY32949 Canola plasma membrane 79.96 93.11
Bra035979.1-P Field mustard endoplasmic reticulum, golgi, vacuole 43.32 93.03
Bra035977.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 92.18 92.71
Bra035978.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 91.6 92.13
Bra033675.1-P Field mustard plasma membrane 91.6 91.95
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 85.5 91.62
CDY71773 Canola plasma membrane 57.63 91.52
Bra027490.1-P Field mustard peroxisome, plasma membrane, vacuole 71.18 91.42
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 85.31 91.41
CDY60903 Canola plasma membrane 85.11 91.39
Bra027487.1-P Field mustard peroxisome, plasma membrane, vacuole 90.84 91.36
CDX96885 Canola plasma membrane 82.44 91.33
CDX96886 Canola plasma membrane 82.44 91.33
CDY14881 Canola plasma membrane 82.44 91.33
CDY43612 Canola peroxisome, plasma membrane, vacuole 86.45 91.15
CDY32948 Canola mitochondrion 39.89 90.48
CDY43613 Canola cytosol, extracellular, golgi 24.81 90.28
CDY32943 Canola plasma membrane 75.19 89.75
Bra027492.1-P Field mustard golgi, plasma membrane, vacuole 32.06 89.36
CDY22354 Canola golgi, plasma membrane, vacuole 78.24 88.36
CDY52378 Canola extracellular, plasma membrane 76.34 87.53
CDY32947 Canola extracellular, golgi, plastid 20.04 87.5
Bra033673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 89.12 87.29
Bra027488.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 85.31 87.13
CDY32942 Canola plasma membrane 40.08 86.78
Bra027463.1-P Field mustard plasma membrane 85.88 86.37
CDX95146 Canola endoplasmic reticulum, plasma membrane 73.09 86.26
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 72.52 85.59
CDY43616 Canola plasma membrane 67.37 85.27
CDY47815 Canola plasma membrane 52.86 82.69
VIT_05s0049g00920.t01 Wine grape plasma membrane 80.53 78.44
KRG92314 Soybean cytosol, golgi, plasma membrane 79.2 77.43
KRH31705 Soybean mitochondrion 78.63 77.3
KRH34477 Soybean extracellular 79.01 77.24
KRH69124 Soybean plasma membrane 78.24 76.92
PGSC0003DMT400034874 Potato plasma membrane 76.91 76.76
PGSC0003DMT400034988 Potato plasma membrane 76.91 76.76
AT2G38940.1 Thale cress plasma membrane 78.05 76.59
Solyc03g005530.1.1 Tomato plasma membrane 76.91 76.33
Solyc03g005560.1.1 Tomato plasma membrane 76.91 76.33
AT3G54700.1 Thale cress plasma membrane 77.67 76.07
CDY50481 Canola plasma membrane 30.53 73.73
AT2G32830.1 Thale cress plasma membrane 75.19 72.69
CDY50482 Canola extracellular, mitochondrion 7.82 71.93
VIT_05s0049g00930.t01 Wine grape plasma membrane 80.34 69.93
AT5G43340.1 Thale cress plasma membrane 66.41 67.44
CDY14878 Canola cytosol 11.83 67.39
AT4G08878.1 Thale cress plasma membrane 34.54 64.64
Os01t0741300-00 Rice mitochondrion 13.36 63.06
Os04t0508751-00 Rice mitochondrion 13.17 62.16
AT4G08895.1 Thale cress mitochondrion 17.94 60.65
AT1G76430.1 Thale cress golgi, plasma membrane, vacuole 47.9 47.18
AT1G20860.2 Thale cress cytosol, mitochondrion, plasma membrane 48.66 43.52
Protein Annotations
MapMan:24.2.2.6MapMan:25.3.2.1EntrezGene:834355ProteinID:AED94950.1ProteinID:AED94951.1Symbol:APT1
ArrayExpress:AT5G43370EnsemblPlantsGene:AT5G43370RefSeq:AT5G43370TAIR:AT5G43370RefSeq:AT5G43370-TAIR-GEnsemblPlants:AT5G43370.1
TAIR:AT5G43370.1Unigene:At.25234ProteinID:BAA24282.1ProteinID:BAA97416.1ProteinID:CAA68945.1GO:GO:0003674
GO:GO:0005215GO:GO:0005315GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005887
GO:GO:0006810GO:GO:0006817GO:GO:0006950GO:GO:0007154GO:GO:0008150GO:GO:0009605
GO:GO:0009987GO:GO:0009991GO:GO:0015293GO:GO:0016020GO:GO:0016021GO:GO:0016036
GO:GO:0022857GO:GO:0055085InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
RefSeq:NP_001190462.1RefSeq:NP_199151.1PFAM:PF00083Symbol:PHT1;2PO:PO:0009025PFscan:PS50850
PANTHER:PTHR24064PANTHER:PTHR24064:SF414InterPro:Phos_permeaseUniProt:Q96243SUPFAM:SSF103473TIGRFAMs:TIGR00887
TMHMM:TMhelixUniParc:UPI0000048BFCSEG:seg:::
Description
PHT1-2Probable inorganic phosphate transporter 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q96243]
Coordinates
chr5:+:17415698..17417972
Molecular Weight (calculated)
57647.6 Da
IEP (calculated)
9.353
GRAVY (calculated)
0.350
Length
524 amino acids
Sequence
(BLAST)
001: MAEQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RIYYFNPESA KPGSLPPHVA AAVNGVALCG TLSGQLFFGW LGDKLGRKKV
101: YGLTLIMMIL CSVASGLSFG NEAKGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGVGILAGG FVALAVSSIF DKKFPAPTYA
201: VNRALSTPPQ VDYIWRIIVM FGALPAALTY YWRMKMPETA RYTALVAKNI KQATADMSKV LQTDIELEER VEDDVKDPRQ NYGLFSKEFL RRHGLHLLGT
301: TSTWFLLDIA FYSQNLFQKD IFSAIGWIPK AATMNATHEV FRIARAQTLI ALCSTVPGYW FTVAFIDTIG RFKIQLNGFF MMTVFMFAIA FPYNHWIKPE
401: NRIGFVVMYS LTFFFANFGP NATTFIVPAE IFPARLRSTC HGISAAAGKA GAIIGAFGFL YAAQNQDKAK VDAGYPPGIG VKNSLIVLGV LNFIGMLFTF
501: LVPEPKGKSL EELSGEAEVS HDEK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.