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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 1
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14877 Canola vacuole 24.55 95.61
CDY14880 Canola extracellular 17.12 90.48
CDY14879 Canola endoplasmic reticulum, golgi 26.58 90.08
CDX96884 Canola cytosol, plasma membrane, vacuole 33.33 89.16
CDY52378 Canola extracellular, plasma membrane 90.09 87.53
CDY32949 Canola plasma membrane 86.49 85.33
CDY43613 Canola cytosol, extracellular, golgi 27.48 84.72
CDY32947 Canola extracellular, golgi, plastid 22.52 83.33
CDY22354 Canola golgi, plasma membrane, vacuole 84.91 81.25
CDY32942 Canola plasma membrane 43.92 80.58
CDY32948 Canola mitochondrion 41.89 80.52
CDY60903 Canola plasma membrane 86.71 78.89
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 86.71 78.73
CDY43612 Canola peroxisome, plasma membrane, vacuole 88.06 78.67
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 86.49 78.53
CDX96885 Canola plasma membrane 83.33 78.22
CDX96886 Canola plasma membrane 83.33 78.22
CDY14881 Canola plasma membrane 83.33 78.22
CDY71773 Canola plasma membrane 58.11 78.18
CDY47815 Canola plasma membrane 58.56 77.61
CDY32943 Canola plasma membrane 75.0 75.85
AT5G43360.1 Thale cress plasma membrane 88.06 75.05
AT5G43370.1 Thale cress endoplasmic reticulum, plasma membrane 86.26 73.09
AT5G43350.1 Thale cress endoplasmic reticulum, plasma membrane 86.04 72.9
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 71.85 71.85
CDY32067 Canola golgi, plasma membrane, vacuole 17.79 70.54
CDY43616 Canola plasma membrane 65.54 70.29
CDX84703 Canola plasma membrane 43.92 68.9
CDY50481 Canola plasma membrane 33.56 68.66
CDX96883 Canola cytosol, peroxisome, plasma membrane 38.06 67.87
CDY22352 Canola plasma membrane 81.31 67.48
CDX96889 Canola plasma membrane, vacuole 76.35 67.4
CDX96882 Canola plasma membrane 29.28 67.36
CDY14876 Canola plasma membrane 29.28 67.36
CDY32951 Canola mitochondrion 22.3 66.44
CDY14883 Canola plasma membrane, vacuole 79.5 65.98
CDX93291 Canola plasma membrane 75.68 65.24
CDX91502 Canola plasma membrane 74.32 65.09
CDY18359 Canola plasma membrane 75.45 65.05
CDX74877 Canola plasma membrane 75.0 64.66
VIT_05s0049g00920.t01 Wine grape plasma membrane 77.48 63.94
CDX74874 Canola plasma membrane 76.58 63.79
CDX91503 Canola plasma membrane 76.13 63.41
CDY13225 Canola plasma membrane 73.42 63.3
KRH69124 Soybean plasma membrane 75.9 63.23
KRH31705 Soybean mitochondrion 75.9 63.23
CDY62546 Canola plasma membrane 73.87 62.96
PGSC0003DMT400034874 Potato plasma membrane 74.32 62.86
PGSC0003DMT400034988 Potato plasma membrane 74.32 62.86
CDY07686 Canola plasma membrane 73.65 62.64
KRG92314 Soybean cytosol, golgi, plasma membrane 75.23 62.31
Os01t0741300-00 Rice mitochondrion 15.54 62.16
CDX73457 Canola plasma membrane 74.32 62.15
KRH34477 Soybean extracellular 75.0 62.13
Solyc03g005560.1.1 Tomato plasma membrane 73.87 62.12
Solyc03g005530.1.1 Tomato plasma membrane 73.87 62.12
CDY43610 Canola mitochondrion 22.52 62.11
CDX76138 Canola plasma membrane 75.0 62.01
CDY60902 Canola plasma membrane 81.08 61.96
CDX78256 Canola plasma membrane 74.1 61.96
Os04t0508751-00 Rice mitochondrion 15.32 61.26
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 75.23 61.17
CDX74875 Canola plasma membrane 74.77 60.81
CDY40417 Canola endoplasmic reticulum, extracellular 6.53 60.42
CDX96881 Canola mitochondrion 22.07 59.39
CDY14875 Canola mitochondrion 21.85 58.79
VIT_05s0049g00930.t01 Wine grape plasma membrane 78.83 58.14
CDY32950 Canola cytosol 12.16 55.67
CDY50482 Canola extracellular, mitochondrion 6.76 52.63
CDY40416 Canola plasma membrane 31.08 52.47
CDY14878 Canola cytosol 10.59 51.09
CDX88275 Canola extracellular, plasma membrane, vacuole 28.83 49.23
CDY31502 Canola plasma membrane 27.93 47.15
CDX88277 Canola cytosol, extracellular 10.59 44.34
CDX88279 Canola plasma membrane 43.69 42.17
CDX87598 Canola plasma membrane 46.4 40.31
CDX68097 Canola plasma membrane 47.75 39.7
CDX87599 Canola plasma membrane 47.97 39.44
CDX88274 Canola plasma membrane 46.85 38.66
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 46.62 38.4
CDX85949 Canola plasma membrane 47.52 38.29
CDY31503 Canola plasma membrane, plastid 36.71 37.64
CDY29499 Canola plasma membrane, plastid 36.71 37.47
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 41.89 36.4
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 41.44 36.36
CDX87600 Canola plasma membrane 47.52 36.25
CDX88276 Canola golgi, plasma membrane 27.7 33.52
CDY31501 Canola plasma membrane 18.69 28.92
CDY72521 Canola plastid 17.57 27.76
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078E175EnsemblPlants:CDX95146ProteinID:CDX95146
ProteinID:CDX95146.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00100702001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850PANTHER:PTHR24064
PANTHER:PTHR24064:SF414SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE231B::
Description
BnaC09g17240D
Coordinates
chrLK031887:-:21259..23022
Molecular Weight (calculated)
48142.4 Da
IEP (calculated)
9.328
GRAVY (calculated)
0.418
Length
444 amino acids
Sequence
(BLAST)
001: MPEKQLGVLK ALDVAKTQLY HFTAILIAGM GFFTDAYDLF CVSLVTKLLG RIYYFNPLSD KPGSLPPHAA GAVNGAALCG TLAGQLFFGW LGDKLGRKTV
101: YGITLIMMTL CSIGSGLSFG NKATGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIGAVFA MQGVGILAGG FVALVVSSIF DMKFPAPTYK
201: VDRVLSTPPQ ADYVWRIIVM FGALPAVLTY YWRMKMPETA RYTALTPDLA MACSPRNSPN DMDIFSGIGW IPKASTMNAI HEVFKIARAQ TLIALCSTLM
301: GFFMMTVFMF AIAFPYDHWT KPENRLGFVV MYSLTFFFAN FGPNATTFII PAEIFPARLR STCHGISAAT GKAGAIVGAF GFLYAAQPQD KTKTDAGYPP
401: GIGIKNSLIT LGVINFVGML FTFLVPEPKG KSLEELSGEN EVGK
Best Arabidopsis Sequence Match ( AT3G54700.1 )
(BLAST)
001: MAGDQLNVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVDGSE KPGTLPPNVS AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG SNPKTVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILTGG IFAIIVSAAF EAKFPAPTYQ
201: IDALASTVPQ ADYVWRIILM VGALPAAMTY YSRSKMPETA RYTALVAKDA KLAASNMSKV LQVEIEAEQQ GTEDKSNSFG LFSKEFMKRH GLHLLGTTST
301: WFLLDIAFYS QNLFQKDIFS AIGWIPPAQT MNAIQEVFKI ARAQTLIALC STVPGYWFTV AFIDVIGRFA IQMMGFFFMT VFMFALAIPY DHWTHKENRI
401: GFVAMYSLTF FFANFGPNAT TFVVPAEIFP ARFRSTCHGI SAASGKLGAM VGAFGFLYLA QSPDKTKTEH GYPPGIGVKN SLIVLGVVNL LGMVFTLLVP
501: ESKGKSLEEM SGENEQNDES SSSSNNNSNN AVSTA
Arabidopsis Description
PHT1-7Probable inorganic phosphate transporter 1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q494P0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.