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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
iPSORT:plastid
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005069.1-P Field mustard plasma membrane 99.06 99.06
CDX74874 Canola plasma membrane 99.06 99.06
CDY18359 Canola plasma membrane 88.37 91.46
CDX93291 Canola plasma membrane 88.18 91.26
CDX91502 Canola plasma membrane 86.12 90.53
CDX74877 Canola plasma membrane 87.43 90.49
CDY32067 Canola golgi, plasma membrane, vacuole 18.95 90.18
CDY62546 Canola plasma membrane 87.05 89.06
CDY07686 Canola plasma membrane 86.12 87.93
CDY13225 Canola plasma membrane 84.24 87.18
CDX76138 Canola plasma membrane 86.68 86.03
CDX74875 Canola plasma membrane 87.62 85.53
CDY40416 Canola plasma membrane 41.65 84.41
CDX78256 Canola plasma membrane 83.86 84.18
CDX73457 Canola plasma membrane 83.68 83.99
VIT_07s0005g03290.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 81.24 82.48
CDY14877 Canola vacuole 17.64 82.46
KRH32181 Soybean extracellular 80.3 82.15
CDY14880 Canola extracellular 12.76 80.95
CDY32948 Canola mitochondrion 34.71 80.09
KRG95659 Soybean plasma membrane 80.3 79.41
CDY32949 Canola plasma membrane 66.98 79.33
KRH67373 Soybean plasma membrane 80.11 79.22
CDY22352 Canola plasma membrane 79.36 79.07
Solyc09g066410.1.1 Tomato endoplasmic reticulum 78.05 78.64
CDX96884 Canola cytosol, plasma membrane, vacuole 24.39 78.31
Solyc06g034200.1.1 Tomato plasma membrane 77.86 77.72
CDY43612 Canola peroxisome, plasma membrane, vacuole 72.42 77.67
CDX96883 Canola cytosol, peroxisome, plasma membrane 36.21 77.51
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 71.11 77.51
CDY60903 Canola plasma membrane 70.92 77.46
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 70.92 77.3
CDY43613 Canola cytosol, extracellular, golgi 20.83 77.08
VIT_07s0005g03300.t01 Wine grape golgi, plasma membrane, vacuole 33.4 77.06
CDY14881 Canola plasma membrane 68.11 76.74
CDX96886 Canola plasma membrane 68.11 76.74
CDX96885 Canola plasma membrane 68.11 76.74
CDY52378 Canola extracellular, plasma membrane 65.48 76.37
CDX95146 Canola endoplasmic reticulum, plasma membrane 63.41 76.13
CDY32947 Canola extracellular, golgi, plastid 17.07 75.83
CDY14883 Canola plasma membrane, vacuole 75.98 75.7
CDY22354 Canola golgi, plasma membrane, vacuole 65.85 75.65
CDY32943 Canola plasma membrane 62.29 75.63
CDX84703 Canola plasma membrane 40.15 75.62
CDY14879 Canola endoplasmic reticulum, golgi 18.57 75.57
CDY71773 Canola plasma membrane 46.72 75.45
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 76.74 74.91
CDX96889 Canola plasma membrane, vacuole 70.36 74.55
CDY47815 Canola plasma membrane 46.15 73.43
CDY40417 Canola endoplasmic reticulum, extracellular 6.57 72.92
CDY60902 Canola plasma membrane 79.17 72.63
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 60.41 72.52
CDY32942 Canola plasma membrane 32.65 71.9
CDY43616 Canola plasma membrane 55.16 71.01
CDX96882 Canola plasma membrane 24.95 68.91
CDY14876 Canola plasma membrane 24.95 68.91
CDY50481 Canola plasma membrane 27.95 68.66
CDY32951 Canola mitochondrion 18.76 67.11
CDY32950 Canola cytosol 11.44 62.89
CDY43610 Canola mitochondrion 18.95 62.73
CDX96881 Canola mitochondrion 19.32 62.42
CDY14875 Canola mitochondrion 19.14 61.82
Solyc09g073010.1.1 Tomato golgi, peroxisome, plasma membrane 45.4 61.58
CDY14878 Canola cytosol 10.51 60.87
GSMUA_Achr4P26760_001 Banana extracellular 16.32 60.84
CDY50482 Canola extracellular, mitochondrion 6.19 57.89
CDX88279 Canola plasma membrane 44.65 51.74
CDX88277 Canola cytosol, extracellular 9.76 49.06
CDX88275 Canola extracellular, plasma membrane, vacuole 23.64 48.46
CDX87598 Canola plasma membrane 45.78 47.75
CDX68097 Canola plasma membrane 46.9 46.82
CDX87599 Canola plasma membrane 46.9 46.3
CDX88274 Canola plasma membrane 46.15 45.72
CDY31502 Canola plasma membrane 22.51 45.63
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 45.97 45.45
CDX85949 Canola plasma membrane 46.72 45.19
CDY31503 Canola plasma membrane, plastid 36.4 44.8
CDX88276 Canola golgi, plasma membrane 30.58 44.41
CDY29499 Canola plasma membrane, plastid 35.83 43.91
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 41.46 43.68
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 41.84 43.64
CDX87600 Canola plasma membrane 46.72 42.78
CDY31501 Canola plasma membrane 21.58 40.07
CDY72521 Canola plastid 21.01 39.86
Protein Annotations
MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078DWB3EnsemblPlants:CDX91503ProteinID:CDX91503ProteinID:CDX91503.1
GO:GO:0003674GO:GO:0005215GO:GO:0005315GO:GO:0005575GO:GO:0006810GO:GO:0006817
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00152868001
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850
PANTHER:PTHR24064PANTHER:PTHR24064:SF341InterPro:Phos_permeaseSUPFAM:SSF103473TIGRFAMs:TIGR00887TMHMM:TMhelix
UniParc:UPI0004EDE2DFSEG:seg::::
Description
BnaC04g06470D
Coordinates
chrLK031867:+:1492629..1494230
Molecular Weight (calculated)
58665.5 Da
IEP (calculated)
8.517
GRAVY (calculated)
0.335
Length
533 amino acids
Sequence
(BLAST)
001: MADNQLQVLN ALDVAKTQWY HFTAIVIAGM GFFTDAYDLF CISLVTKLLG RIYYHEEGSH KPGTLPPNVA AATNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMIMVL CSIASGLSFG DKPKTVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFISAVFA MQGFGIMAGG IFAIIISSVF DAKFPAPAYA
201: DDALGSTVPQ ADFVWRIILM FGAIPASMTY YSRSKMPETA RYTALVAKNA QQAASDMSRV LQVAIEPEQI LEEISTDKSK SFSLFSKQFM KRHGLHLLGT
301: TSTWFLLDIA FYSQNLFQKD IFSAIGWIPP VQTMNAVQEV FKIARAQTLI ALCSTVPGYW FTVVFIDVIG RFAIQLMGFF FMTVFMFALA IPYTHWTHKD
401: NRIGFVIMYS LTFFFANFGP NATTFVVPAE IFPARFRSTC HGISAASGKL GAMVGAFGFL YLAQSPDKNK TDAGYPPGIG VRNSLLVLGV INFLGILFTF
501: LVPESKGKSL EEMSGENESN EQNNNDSRTV EMV
Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)
001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV
Arabidopsis Description
PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.