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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14877 Canola vacuole 24.89 98.25
CDY14880 Canola extracellular 18.22 97.62
CDY32948 Canola mitochondrion 50.0 97.4
CDY14879 Canola endoplasmic reticulum, golgi 28.0 96.18
CDX96884 Canola cytosol, plasma membrane, vacuole 34.67 93.98
CDY22354 Canola golgi, plasma membrane, vacuole 94.0 91.16
CDY43613 Canola cytosol, extracellular, golgi 29.11 90.97
CDY32947 Canola extracellular, golgi, plastid 23.78 89.17
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 96.67 88.96
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 96.44 88.75
CDY60903 Canola plasma membrane 96.22 88.73
CDX96886 Canola plasma membrane 92.89 88.37
CDX96885 Canola plasma membrane 92.89 88.37
CDY14881 Canola plasma membrane 92.89 88.37
CDY43612 Canola peroxisome, plasma membrane, vacuole 97.33 88.13
CDY32942 Canola plasma membrane 46.89 87.19
CDX95146 Canola endoplasmic reticulum, plasma membrane 85.33 86.49
CDY32943 Canola plasma membrane 83.78 85.88
CDY52378 Canola extracellular, plasma membrane 84.89 83.59
CDY47815 Canola plasma membrane 62.22 83.58
AT5G43360.1 Thale cress plasma membrane 95.56 82.53
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 80.89 81.98
CDY71773 Canola plasma membrane 59.78 81.52
CDY43616 Canola plasma membrane 74.22 80.68
AT5G43350.1 Thale cress endoplasmic reticulum, plasma membrane 93.56 80.34
CDY50481 Canola plasma membrane 38.67 80.18
AT5G43370.1 Thale cress endoplasmic reticulum, plasma membrane 93.11 79.96
CDY22352 Canola plasma membrane 88.44 74.39
CDY32067 Canola golgi, plasma membrane, vacuole 18.44 74.11
CDX84703 Canola plasma membrane 45.78 72.79
CDY14883 Canola plasma membrane, vacuole 84.22 70.84
CDX91502 Canola plasma membrane 79.33 70.41
CDX93291 Canola plasma membrane 80.44 70.29
CDY50482 Canola extracellular, mitochondrion 8.89 70.18
CDY18359 Canola plasma membrane 80.22 70.1
CDX74877 Canola plasma membrane 79.78 69.71
CDX96889 Canola plasma membrane, vacuole 77.33 69.18
CDX96882 Canola plasma membrane 29.56 68.91
CDY14876 Canola plasma membrane 29.56 68.91
CDY40417 Canola endoplasmic reticulum, extracellular 7.33 68.75
VIT_05s0049g00920.t01 Wine grape plasma membrane 81.78 68.4
CDY60902 Canola plasma membrane 88.22 68.33
PGSC0003DMT400034874 Potato plasma membrane 79.56 68.19
PGSC0003DMT400034988 Potato plasma membrane 79.56 68.19
KRH31705 Soybean mitochondrion 80.67 68.11
Solyc03g005530.1.1 Tomato plasma membrane 79.78 67.99
Solyc03g005560.1.1 Tomato plasma membrane 79.78 67.99
CDX96883 Canola cytosol, peroxisome, plasma membrane 37.56 67.87
KRG92314 Soybean cytosol, golgi, plasma membrane 80.44 67.54
CDY13225 Canola plasma membrane 77.11 67.38
CDX74874 Canola plasma membrane 79.78 67.35
KRH69124 Soybean plasma membrane 79.78 67.35
CDY62546 Canola plasma membrane 77.78 67.18
KRH34477 Soybean extracellular 80.0 67.16
CDX91503 Canola plasma membrane 79.33 66.98
CDY07686 Canola plasma membrane 77.33 66.67
CDX73457 Canola plasma membrane 77.78 65.91
CDX76138 Canola plasma membrane 78.44 65.74
CDX78256 Canola plasma membrane 77.56 65.72
CDX74875 Canola plasma membrane 79.56 65.57
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 79.33 65.38
CDY32951 Canola mitochondrion 21.11 63.76
Os01t0741300-00 Rice mitochondrion 15.11 61.26
VIT_05s0049g00930.t01 Wine grape plasma membrane 81.78 61.13
Os04t0508751-00 Rice mitochondrion 14.89 60.36
CDY43610 Canola mitochondrion 21.56 60.25
CDY32950 Canola cytosol 12.67 58.76
CDX96881 Canola mitochondrion 21.33 58.18
CDY14875 Canola mitochondrion 21.11 57.58
CDY40416 Canola plasma membrane 33.11 56.65
CDX88275 Canola extracellular, plasma membrane, vacuole 28.89 50.0
CDY31502 Canola plasma membrane 28.22 48.29
CDX88279 Canola plasma membrane 47.11 46.09
CDX88277 Canola cytosol, extracellular 10.44 44.34
CDX87598 Canola plasma membrane 49.56 43.64
CDX68097 Canola plasma membrane 50.89 42.88
CDX87599 Canola plasma membrane 51.33 42.78
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 50.22 41.93
CDX88274 Canola plasma membrane 49.56 41.45
CDX85949 Canola plasma membrane 50.67 41.38
CDY31503 Canola plasma membrane, plastid 39.78 41.34
CDY29499 Canola plasma membrane, plastid 39.56 40.92
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 44.89 39.53
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 44.44 39.53
CDX88276 Canola golgi, plasma membrane 32.0 39.24
CDY14878 Canola cytosol 8.0 39.13
CDX87600 Canola plasma membrane 50.44 39.0
CDY72521 Canola plastid 20.0 32.03
CDY31501 Canola plasma membrane 20.22 31.71
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078H628UniProt:A0A078H628EnsemblPlants:CDY32949
ProteinID:CDY32949ProteinID:CDY32949.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00053156001
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850
PANTHER:PTHR24064PANTHER:PTHR24064:SF414SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE5AB0:
Description
BnaA09g16440DBnaA09g16440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H628]
Coordinates
chrLK032303:+:274110..276065
Molecular Weight (calculated)
48991.5 Da
IEP (calculated)
9.607
GRAVY (calculated)
0.471
Length
450 amino acids
Sequence
(BLAST)
001: MAEQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RIYYFNPLSA KPGSLPPHVA AAVNGVALCG TLAGQLFFGW LGDKLGRKKV
101: YGITLIMMIL CSVASGLSFG HQAKGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGVGILAGG FVALAVSSIF DKKFPSPTYA
201: VDRALSTPPQ ADYIWRIIVM FGALPAALTY YWRMKMPETA RYTALVAKNL KQATQDMSKA ATMNAIHEVF RIGRAQTLIA LCSTVPGYWF TVAFIDIMGR
301: FAIQLMGFFM MTVFMFAIAF PYDHWIKPDN RIGFVVMYSL TFFFANFGPN ATTFIVPAEI FPARLRSTCH GISAATGKAG AIVGAFGFLY AAQPQDKTKT
401: DAGYPPGIGV KNSLIMLGCI NFVGMLFTFL VPEPKGKSLE ELSGETEAEK
Best Arabidopsis Sequence Match ( AT3G54700.1 )
(BLAST)
001: MAGDQLNVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVDGSE KPGTLPPNVS AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG SNPKTVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILTGG IFAIIVSAAF EAKFPAPTYQ
201: IDALASTVPQ ADYVWRIILM VGALPAAMTY YSRSKMPETA RYTALVAKDA KLAASNMSKV LQVEIEAEQQ GTEDKSNSFG LFSKEFMKRH GLHLLGTTST
301: WFLLDIAFYS QNLFQKDIFS AIGWIPPAQT MNAIQEVFKI ARAQTLIALC STVPGYWFTV AFIDVIGRFA IQMMGFFFMT VFMFALAIPY DHWTHKENRI
401: GFVAMYSLTF FFANFGPNAT TFVVPAEIFP ARFRSTCHGI SAASGKLGAM VGAFGFLYLA QSPDKTKTEH GYPPGIGVKN SLIVLGVVNL LGMVFTLLVP
501: ESKGKSLEEM SGENEQNDES SSSSNNNSNN AVSTA
Arabidopsis Description
PHT1-7Probable inorganic phosphate transporter 1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q494P0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.