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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • plastid 4
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:golgi
Predotar:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31501 Canola plasma membrane 64.14 97.21
CDY31503 Canola plasma membrane, plastid 95.86 96.3
Bra025850.1-P Field mustard plasma membrane 99.08 79.52
CDY72521 Canola plastid 46.44 71.89
CDX88276 Canola golgi, plasma membrane 59.77 70.84
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 77.7 66.14
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 76.55 65.81
AT1G20860.2 Thale cress cytosol, mitochondrion, plasma membrane 82.99 61.6
CDX87599 Canola plasma membrane 75.63 60.93
CDX87598 Canola plasma membrane 70.11 59.69
CDX68097 Canola plasma membrane 72.41 58.99
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 72.87 58.81
CDX88279 Canola plasma membrane 62.07 58.7
CDY50482 Canola extracellular, mitochondrion 7.59 57.89
CDX85949 Canola plasma membrane 72.87 57.53
CDX88274 Canola plasma membrane 70.57 57.06
CDY14879 Canola endoplasmic reticulum, golgi 17.01 56.49
CDX87600 Canola plasma membrane 71.03 53.09
CDY32948 Canola mitochondrion 27.82 52.38
CDY31502 Canola plasma membrane 30.8 50.95
CDY14877 Canola vacuole 13.1 50.0
KRH50469 Soybean golgi, mitochondrion, plasma membrane, plastid 57.93 49.32
PGSC0003DMT400025887 Potato cytosol, peroxisome, plasma membrane 57.7 49.31
KRG89401 Soybean golgi, mitochondrion, plasma membrane, plastid 57.24 49.21
CDY71773 Canola plasma membrane 36.32 47.88
VIT_18s0122g00780.t01 Wine grape cytosol, peroxisome, plasma membrane 57.7 47.54
CDY43616 Canola plasma membrane 42.99 45.17
CDY40416 Canola plasma membrane 26.9 44.49
CDX88275 Canola extracellular, plasma membrane, vacuole 26.21 43.85
CDY32067 Canola golgi, plasma membrane, vacuole 11.26 43.75
CDY32951 Canola mitochondrion 14.71 42.95
CDY32943 Canola plasma membrane 42.99 42.6
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 43.22 42.34
CDX96883 Canola cytosol, peroxisome, plasma membrane 23.91 41.77
GSMUA_Achr3P03730_001 Banana cytosol, golgi, plasma membrane 46.21 41.61
Os06t0325200-01 Rice cytosol 52.41 41.3
CDY14875 Canola mitochondrion 15.4 40.61
CDX96886 Canola plasma membrane 43.91 40.38
CDX96885 Canola plasma membrane 43.91 40.38
CDY14881 Canola plasma membrane 43.91 40.38
CDX96881 Canola mitochondrion 15.17 40.0
TraesCS7B01G193000.2 Wheat plasma membrane 51.72 39.89
TraesCS7A01G226600.1 Wheat plasma membrane 51.72 39.89
CDY43610 Canola mitochondrion 14.71 39.75
CDY32949 Canola plasma membrane 40.92 39.56
EER88333 Sorghum cytosol, mitochondrion, plasma membrane, plastid 51.95 39.44
TraesCS7D01G227800.1 Wheat plasma membrane 51.03 39.36
CDY50481 Canola plasma membrane 19.54 39.17
CDY60903 Canola plasma membrane 43.91 39.14
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 43.91 39.06
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 43.91 39.06
CDY43612 Canola peroxisome, plasma membrane, vacuole 44.37 38.83
Os06t0324800-01 Rice mitochondrion, plasma membrane 51.95 38.83
HORVU0Hr1G020720.1 Barley peroxisome, plasma membrane, plastid 50.34 38.76
CDY22354 Canola golgi, plasma membrane, vacuole 41.15 38.58
CDY52378 Canola extracellular, plasma membrane 40.23 38.29
CDX73457 Canola plasma membrane 45.29 37.1
CDY14883 Canola plasma membrane, vacuole 45.52 37.01
CDY13225 Canola plasma membrane 43.68 36.89
CDX78256 Canola plasma membrane 44.83 36.72
CDX95146 Canola endoplasmic reticulum, plasma membrane 37.47 36.71
CDY07686 Canola plasma membrane 43.91 36.59
CDY62546 Canola plasma membrane 43.45 36.28
CDY22352 Canola plasma membrane 44.6 36.26
CDX91502 Canola plasma membrane 41.84 35.9
CDX91503 Canola plasma membrane 43.91 35.83
CDX74874 Canola plasma membrane 43.91 35.83
CDX76138 Canola plasma membrane 44.14 35.75
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 44.83 35.71
CDY18359 Canola plasma membrane 42.07 35.53
CDY40417 Canola endoplasmic reticulum, extracellular 3.91 35.42
CDX93291 Canola plasma membrane 41.84 35.34
CDX74877 Canola plasma membrane 41.84 35.34
CDX96889 Canola plasma membrane, vacuole 40.23 34.79
CDY60902 Canola plasma membrane 45.52 34.08
CDX74875 Canola plasma membrane 41.84 33.33
CDY14878 Canola cytosol 6.67 31.52
CDX96884 Canola cytosol, plasma membrane, vacuole 11.95 31.33
CDX84703 Canola plasma membrane 19.54 30.04
CDY47815 Canola plasma membrane 22.53 29.25
GSMUA_Achr4P09810_001 Banana peroxisome, plasma membrane, plastid 25.75 27.18
CDY32942 Canola plasma membrane 14.25 25.62
CDY14876 Canola plasma membrane 11.03 24.87
CDX96882 Canola plasma membrane 11.03 24.87
CDX88277 Canola cytosol, extracellular 2.99 12.26
CDY43613 Canola cytosol, extracellular, golgi 2.53 7.64
CDY32947 Canola extracellular, golgi, plastid 1.15 4.17
CDY32950 Canola cytosol 0.46 2.06
CDY14880 Canola extracellular 0.0 0.0
Protein Annotations
MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078GWH2UniProt:A0A078GWH2EnsemblPlants:CDY29499ProteinID:CDY29499
ProteinID:CDY29499.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00043185001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083ScanProsite:PS00217PFscan:PS50850
PANTHER:PTHR24064PANTHER:PTHR24064:SF210SUPFAM:SSF103473InterPro:Sugar_transporter_CSTMHMM:TMhelixUniParc:UPI0004EEA992
SEG:seg:::::
Description
BnaA06g14710DBnaA06g14710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWH2]
Coordinates
chrLK032238:+:283570..286713
Molecular Weight (calculated)
47860.9 Da
IEP (calculated)
7.469
GRAVY (calculated)
0.274
Length
435 amino acids
Sequence
(BLAST)
001: MILSSFGCGF SVCTSRRSCV MVSLGFFRFI LGLGIGGDYP LSATIMSEFS NKRTRGAFIA AVFSMQGSGI LVSSAVTMAV CVAFKNFGGG SKADGEAPVV
101: ADVAWRLILM IGALPAALTL YWRMLMPETA RYTALVENNI VQAAKEMQKV MSISNISDET TTEPPSPSPP PTYKLFSIRF LRLHGRDLFA ASANWFLVDV
201: VFYTSNFLLS HIFSSYSHKP SSSATTNVYD ATFEVAKLGA IVAACSTIPG YWFTVFFIDK VGRVRIQIMG FFFMAVIFLA AGIPYGWYWS KHEQTKKGFM
301: VLYGLVFFFC NFGPNTTTFI IPAELFPARF RSTCHGISGA AGKLGAIVGT VGFLWATKKV EDGDDMNQVY PDVNRMRTAF LILGGVCIAG MFVTYFFTKE
401: TMGRSLEENE HEHEHERDKN VEDEEIGDGQ SLAST
Best Arabidopsis Sequence Match ( AT1G20860.1 )
(BLAST)
001: MPIKVLSSLD VARTQWYHFK AIIVAGMGLF TDAYDLFCIA PVMKMISHVY YNGDSINTAV LSTSYAIALL GTATGQLVFG YLGDRVGRRR VYGLCLIIMI
101: LSSFGCGFSV CTTRRSCVMV SLGFFRFFLG LGIGGDYPLS ATIMSEFANK RTRGAFIAAV FSMQGLGILV SSAVTMAVCV AFKRSGGGLE VDAAAPTEAD
201: LAWRLILMIG ALPAALTFYW RMLMPETARY TALVENNIVQ AAKDMQRVMS RSHISDEATT DPPPPPPPPS YKLFSRCFFR LHGRDLFAAS FNWFLVDIVF
301: YTSNLLLSHI FSHYSKKPST AENVYDAAFE VAELGAIIAA CSTIPGYWFT VYFIDKIGRV KIQIMGFFFM AVIYLVAGIP YSWYWSKHEH NNKGFMVLYG
401: LVFFFCNFGP NTTTFIIPAE HFPARFRSTC HGISGAAGKL GAIVGTVGFL WATKKMESDD KNQIYPEVNR MRIAFLILGG VCIAGILVTY FFTKETMGRS
501: LEENEHDQDN NAESEDEPQI VDGQSSVSTL LQTR
Arabidopsis Description
PHT1;8phosphate transporter 1;8 [Source:TAIR;Acc:AT1G20860]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.