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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14880 Canola extracellular 22.97 77.38
CDX96884 Canola cytosol, plasma membrane, vacuole 45.23 77.11
CDY14879 Canola endoplasmic reticulum, golgi 35.69 77.1
CDY32947 Canola extracellular, golgi, plastid 31.8 75.0
CDY32067 Canola golgi, plasma membrane, vacuole 29.33 74.11
CDY43613 Canola cytosol, extracellular, golgi 37.1 72.92
CDY32942 Canola plasma membrane 60.07 70.25
CDY14876 Canola plasma membrane 45.23 66.32
CDX96882 Canola plasma membrane 45.23 66.32
CDY40417 Canola endoplasmic reticulum, extracellular 10.6 62.5
CDY32950 Canola cytosol 19.79 57.73
CDY50482 Canola extracellular, mitochondrion 10.95 54.39
Bra022925.1-P Field mustard plasma membrane 99.65 51.74
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 97.53 50.55
AT2G32830.1 Thale cress plasma membrane 92.93 48.52
CDX88275 Canola extracellular, plasma membrane, vacuole 44.17 48.08
CDY31502 Canola plasma membrane 43.46 46.77
CDY32949 Canola plasma membrane 72.79 45.78
CDY52378 Canola extracellular, plasma membrane 73.14 45.3
CDY22354 Canola golgi, plasma membrane, vacuole 72.44 44.18
CDX95146 Canola endoplasmic reticulum, plasma membrane 68.9 43.92
CDY18359 Canola plasma membrane 76.33 41.94
CDX93291 Canola plasma membrane 76.33 41.94
CDX91502 Canola plasma membrane 74.91 41.81
CDY60903 Canola plasma membrane 72.08 41.8
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 72.08 41.72
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 72.08 41.72
VIT_05s0049g00920.t01 Wine grape plasma membrane 79.15 41.64
CDX74877 Canola plasma membrane 74.91 41.16
CDX96889 Canola plasma membrane, vacuole 73.14 41.15
CDY43612 Canola peroxisome, plasma membrane, vacuole 72.08 41.05
CDY62546 Canola plasma membrane 74.91 40.69
CDY07686 Canola plasma membrane 74.56 40.42
CDY22352 Canola plasma membrane 76.33 40.37
CDX91503 Canola plasma membrane 75.62 40.15
CDX74874 Canola plasma membrane 75.27 39.96
CDX96886 Canola plasma membrane 66.43 39.75
CDY14881 Canola plasma membrane 66.43 39.75
CDX96885 Canola plasma membrane 66.43 39.75
CDY13225 Canola plasma membrane 71.73 39.42
CDX74875 Canola plasma membrane 75.27 39.01
CDY14883 Canola plasma membrane, vacuole 73.5 38.88
CDX73457 Canola plasma membrane 72.79 38.79
CDX78256 Canola plasma membrane 72.79 38.79
CDX76138 Canola plasma membrane 73.14 38.55
PGSC0003DMT400034874 Potato plasma membrane 69.61 37.52
PGSC0003DMT400034988 Potato plasma membrane 69.61 37.52
Solyc03g005560.1.1 Tomato plasma membrane 69.96 37.5
Solyc03g005530.1.1 Tomato plasma membrane 69.96 37.5
VIT_05s0049g00930.t01 Wine grape plasma membrane 79.51 37.38
CDY60902 Canola plasma membrane 76.33 37.18
CDY32943 Canola plasma membrane 55.48 35.76
CDX88277 Canola cytosol, extracellular 13.07 34.91
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 52.65 33.56
CDX88279 Canola plasma membrane 48.41 29.78
CDY43616 Canola plasma membrane 42.76 29.23
CDY47815 Canola plasma membrane 32.16 27.16
CDX87598 Canola plasma membrane 48.06 26.61
CDX68097 Canola plasma membrane 49.82 26.4
CDX87599 Canola plasma membrane 49.82 26.11
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 49.12 25.79
CDX85949 Canola plasma membrane 49.82 25.59
CDY71773 Canola plasma membrane 29.68 25.45
CDX88274 Canola plasma membrane 48.06 25.28
CDX87600 Canola plasma membrane 49.82 24.23
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 38.52 21.54
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 38.52 21.33
CDY31503 Canola plasma membrane, plastid 30.04 19.63
CDY29499 Canola plasma membrane, plastid 30.04 19.54
CDX88276 Canola golgi, plasma membrane 20.85 16.08
CDY32948 Canola mitochondrion 12.01 14.72
CDY40416 Canola plasma membrane 12.37 13.31
CDY14878 Canola cytosol 3.89 11.96
CDY14875 Canola mitochondrion 3.53 6.06
CDX96881 Canola mitochondrion 3.53 6.06
CDY43610 Canola mitochondrion 2.47 4.35
CDY32951 Canola mitochondrion 2.12 4.03
CDX96883 Canola cytosol, peroxisome, plasma membrane 1.06 1.2
CDY50481 Canola plasma membrane 0.71 0.92
Os01t0741300-00 Rice mitochondrion 0.35 0.9
Os04t0508751-00 Rice mitochondrion 0.35 0.9
CDY31501 Canola plasma membrane 0.71 0.7
CDY72521 Canola plastid 0.35 0.36
CDY14877 Canola vacuole 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078DBK2EnsemblPlants:CDX84703ProteinID:CDX84703
ProteinID:CDX84703.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00141984001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850PANTHER:PTHR24064
PANTHER:PTHR24064:SF414SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EDFEB8SEG:seg:
Description
BnaA03g15270D
Coordinates
chrLK031838:-:790312..793126
Molecular Weight (calculated)
30135.8 Da
IEP (calculated)
9.390
GRAVY (calculated)
0.363
Length
283 amino acids
Sequence
(BLAST)
001: MARKGKEVLN ALDAAKTQMY HFTAIVIAGM GFFTDAYDLF SISLVTKLLG RIYYHVDGSK KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGITLMVMVL CSLGSGLSFG HSSNGAMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILAGG IVSLIVSTAF DHAFDAPTYE
201: VDPVGSTVPQ ADYVWRIVLM FGAIPALLTY YWRMKMPETA RYTALVARNT KQAAADMSKI GGGGGGDGTE IMDVANSGRT VPV
Best Arabidopsis Sequence Match ( AT2G32830.1 )
(BLAST)
001: MAKKGKEVLN ALDAAKTQMY HFTAIVIAGM GFFTDAYDLF SISLVTKLLG RIYYHVDSSK KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGITLMLMVL CSLGSGLSFG HSANGVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILAGG IVSLIVSSTF DHAFKAPTYE
201: VDPVGSTVPQ ADYVWRIVLM FGAIPALLTY YWRMKMPETA RYTALVARNT KQAASDMSKV LQVDLIAEEE AQSNSNSSNP NFTFGLFTRE FARRHGLHLL
301: GTTTTWFLLD IAYYSSNLFQ KDIYTAIGWI PAAETMNAIH EVFTVSKAQT LIALCGTVPG YWFTVAFIDI LGRFFIQLMG FIFMTIFMFA LAIPYDHWRH
401: RENRIGFLIM YSLTMFFANF GPNATTFVVP AEIFPARLRS TCHGISAASG KAGAIVGAFG FLYAAQSSDS EKTDAGYPPG IGVRNSLLML ACVNFLGIVF
501: TLLVPESKGK SLEEISREDE EQSGGDTVVE MTVANSGRKV PV
Arabidopsis Description
PHT1-5Probable inorganic phosphate transporter 1-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYF4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.