CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14880	Canola	extracellular	43.37	85.71
CDY43613	Canola	cytosol, extracellular, golgi	63.25	72.92
CDY32947	Canola	extracellular, golgi, plastid	47.59	65.83
CDY40417	Canola	endoplasmic reticulum, extracellular	18.07	62.5
CDY14879	Canola	endoplasmic reticulum, golgi	48.8	61.83
CDY32942	Canola	plasma membrane	81.33	55.79
CDY14876	Canola	plasma membrane	56.02	48.19
CDX96882	Canola	plasma membrane	56.02	48.19
CDY32950	Canola	cytosol	27.11	46.39
CDX84703	Canola	plasma membrane	77.11	45.23
CDY32067	Canola	golgi, plasma membrane, vacuole	29.52	43.75
AT4G08878.1	Thale cress	plasma membrane	59.64	35.36
CDY32949	Canola	plasma membrane	93.98	34.67
CDX88275	Canola	extracellular, plasma membrane, vacuole	53.01	33.85
CDY22354	Canola	golgi, plasma membrane, vacuole	94.58	33.84
CDY14881	Canola	plasma membrane	95.78	33.62
CDX96886	Canola	plasma membrane	95.78	33.62
CDX96885	Canola	plasma membrane	95.78	33.62
CDX95146	Canola	endoplasmic reticulum, plasma membrane	89.16	33.33
CDY31502	Canola	plasma membrane	51.81	32.7
CDY52378	Canola	extracellular, plasma membrane	89.76	32.6
CDY60903	Canola	plasma membrane	95.78	32.58
CDY22353	Canola	endoplasmic reticulum, golgi, plasma membrane	95.78	32.52
CDY50480	Canola	endoplasmic reticulum, golgi, plasma membrane	95.78	32.52
CDY43612	Canola	peroxisome, plasma membrane, vacuole	95.18	31.79
CDY50482	Canola	extracellular, mitochondrion	10.84	31.58
CDX88277	Canola	cytosol, extracellular	19.28	30.19
CDY32943	Canola	plasma membrane	74.7	28.25
CDX96889	Canola	plasma membrane, vacuole	82.53	27.24
CDY22352	Canola	plasma membrane	84.34	26.17
CDX91502	Canola	plasma membrane	78.92	25.84
CDY14883	Canola	plasma membrane, vacuole	83.13	25.79
CDX74877	Canola	plasma membrane	79.52	25.63
CDY13225	Canola	plasma membrane	78.92	25.44
CDY07686	Canola	plasma membrane	79.52	25.29
CDY62546	Canola	plasma membrane	78.31	24.95
CDX93291	Canola	plasma membrane	77.11	24.85
CDY18359	Canola	plasma membrane	77.11	24.85
CDY32944	Canola	endoplasmic reticulum, golgi, plasma membrane	66.27	24.77
CDX76138	Canola	plasma membrane	79.52	24.58
CDX74874	Canola	plasma membrane	78.31	24.39
CDX91503	Canola	plasma membrane	78.31	24.39
CDX73457	Canola	plasma membrane	77.11	24.11
CDX78256	Canola	plasma membrane	77.11	24.11
CDY60902	Canola	plasma membrane	84.34	24.1
CDX74875	Canola	plasma membrane	78.92	23.99
CDX79505	Canola	cytosol, endoplasmic reticulum, plasma membrane	77.11	23.44
CDY47815	Canola	plasma membrane	46.39	22.99
AT5G43340.1	Thale cress	plasma membrane	71.08	22.87
Bra035976.1-P	Field mustard	plasma membrane	68.07	21.86
CDY43616	Canola	plasma membrane	48.8	19.57
CDX88279	Canola	plasma membrane	54.22	19.57
CDX87598	Canola	plasma membrane	54.82	17.81
CDX88274	Canola	plasma membrane	54.22	16.73
CDX87599	Canola	plasma membrane	54.22	16.67
CDY45985	Canola	endoplasmic reticulum, plasma membrane, plastid	53.61	16.51
CDX68097	Canola	plasma membrane	53.01	16.48
CDX85949	Canola	plasma membrane	53.01	15.97
CDX87600	Canola	plasma membrane	55.42	15.81
CDY33652	Canola	golgi, mitochondrion, plasma membrane, plastid	37.95	12.45
CDX96616	Canola	golgi, mitochondrion, plasma membrane, plastid	37.95	12.33
CDY29499	Canola	plasma membrane, plastid	31.33	11.95
CDY31503	Canola	plasma membrane, plastid	30.72	11.78
CDY71773	Canola	plasma membrane	21.69	10.91
CDY32948	Canola	mitochondrion	10.84	7.79
CDX88276	Canola	golgi, plasma membrane	15.66	7.08
CDY14878	Canola	cytosol	3.61	6.52
CDY40416	Canola	plasma membrane	7.83	4.94
CDY32951	Canola	mitochondrion	2.41	2.68
CDY43610	Canola	mitochondrion	2.41	2.48
CDX96881	Canola	mitochondrion	2.41	2.42
CDY14875	Canola	mitochondrion	2.41	2.42
CDY72521	Canola	plastid	0.0	0.0
CDY50481	Canola	plasma membrane	0.0	0.0
CDX96883	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0
CDY14877	Canola	vacuole	0.0	0.0
CDY31501	Canola	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDX96884	EnsemblPlantsGene:GSBRNA2T00103760001	Gene3D:1.20.1250.20	GO:A0A078E855	InterPro:MFS_trans_sf	PANTHER:PTHR24064
PANTHER:PTHR24064:SF414	ProteinID:CDX96884	ProteinID:CDX96884.1	SEG:seg	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI0004EED77B	MapMan:24.2.2.6	MapMan:25.3.2.1	:	:	:

Description

BnaC02g30220D

Coordinates

chrLK031896:-:21118..22031

Molecular Weight (calculated)

18406.1 Da

IEP (calculated)

9.285

GRAVY (calculated)

0.637

Length

166 amino acids

Sequence
(BLAST)

001: MAEQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RLYYFNPLSE KPGSLPPHVA AAVNVYGITL IMMILCSVAS GLSFGNKAKG
101: VMTTLCFFRF WLGFGIGGDY PLSATIMSEY ANKKTPDYIW RIIVIIIVMF GALPAALTYY WRMKMP

Best Arabidopsis Sequence Match ( AT2G32830.1 )
(BLAST)

001: MAKKGKEVLN ALDAAKTQMY HFTAIVIAGM GFFTDAYDLF SISLVTKLLG RIYYHVDSSK KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGITLMLMVL CSLGSGLSFG HSANGVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILAGG IVSLIVSSTF DHAFKAPTYE
201: VDPVGSTVPQ ADYVWRIVLM FGAIPALLTY YWRMKMPETA RYTALVARNT KQAASDMSKV LQVDLIAEEE AQSNSNSSNP NFTFGLFTRE FARRHGLHLL
301: GTTTTWFLLD IAYYSSNLFQ KDIYTAIGWI PAAETMNAIH EVFTVSKAQT LIALCGTVPG YWFTVAFIDI LGRFFIQLMG FIFMTIFMFA LAIPYDHWRH
401: RENRIGFLIM YSLTMFFANF GPNATTFVVP AEIFPARLRS TCHGISAASG KAGAIVGAFG FLYAAQSSDS EKTDAGYPPG IGVRNSLLML ACVNFLGIVF
501: TLLVPESKGK SLEEISREDE EQSGGDTVVE MTVANSGRKV PV

Arabidopsis Description

PHT1-5Probable inorganic phosphate transporter 1-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYF4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.