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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:golgi, peroxisome, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:golgi
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31501 Canola plasma membrane 70.11 68.64
CDX88276 Canola golgi, plasma membrane 75.09 57.49
CDX87599 Canola plasma membrane 95.37 49.63
CDY14877 Canola vacuole 19.57 48.25
CDY29499 Canola plasma membrane, plastid 71.89 46.44
AT1G76430.1 Thale cress golgi, plasma membrane, vacuole 87.9 46.43
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 87.54 45.64
CDY31503 Canola plasma membrane, plastid 70.11 45.5
CDX68097 Canola plasma membrane 85.77 45.13
CDX85949 Canola plasma membrane 85.41 43.56
CDX87598 Canola plasma membrane 77.58 42.66
CDX88274 Canola plasma membrane 80.07 41.82
CDY32951 Canola mitochondrion 22.06 41.61
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 74.02 40.7
CDX87600 Canola plasma membrane 82.92 40.03
CDX96883 Canola cytosol, peroxisome, plasma membrane 35.23 39.76
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 71.53 39.72
CDY50481 Canola plasma membrane 30.25 39.17
CDY32948 Canola mitochondrion 32.03 38.96
CDY14875 Canola mitochondrion 22.42 38.18
CDY43610 Canola mitochondrion 21.71 37.89
CDX96881 Canola mitochondrion 22.06 37.58
CDX88279 Canola plasma membrane 61.21 37.39
CDY40416 Canola plasma membrane 33.45 35.74
KRH50469 Soybean golgi, mitochondrion, plasma membrane, plastid 53.38 29.35
PGSC0003DMT400025887 Potato cytosol, peroxisome, plasma membrane 53.02 29.27
KRG89401 Soybean golgi, mitochondrion, plasma membrane, plastid 51.25 28.46
VIT_18s0122g00780.t01 Wine grape cytosol, peroxisome, plasma membrane 52.67 28.03
CDY71773 Canola plasma membrane 32.74 27.88
CDY47815 Canola plasma membrane 31.67 26.57
CDY43616 Canola plasma membrane 36.3 24.64
GSMUA_Achr3P03730_001 Banana cytosol, golgi, plasma membrane 42.35 24.64
Os06t0325200-01 Rice cytosol 48.04 24.46
CDY32943 Canola plasma membrane 36.3 23.23
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 36.3 22.97
TraesCS7A01G226600.1 Wheat plasma membrane 45.91 22.87
TraesCS7B01G193000.2 Wheat plasma membrane 45.91 22.87
EER88333 Sorghum cytosol, mitochondrion, plasma membrane, plastid 46.62 22.86
CDY14878 Canola cytosol 7.47 22.83
Os06t0324800-01 Rice mitochondrion, plasma membrane 46.98 22.68
TraesCS7D01G227800.1 Wheat plasma membrane 45.2 22.52
CDY07686 Canola plasma membrane 41.28 22.22
CDY62546 Canola plasma membrane 40.93 22.07
CDX78256 Canola plasma membrane 41.64 22.03
HORVU0Hr1G020720.1 Barley peroxisome, plasma membrane, plastid 44.13 21.95
CDX73457 Canola plasma membrane 40.93 21.66
CDX96886 Canola plasma membrane 36.3 21.56
CDX96885 Canola plasma membrane 36.3 21.56
CDY14881 Canola plasma membrane 36.3 21.56
CDY13225 Canola plasma membrane 39.15 21.36
CDY60903 Canola plasma membrane 36.65 21.11
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 36.65 21.06
CDX91503 Canola plasma membrane 39.86 21.01
CDX74874 Canola plasma membrane 39.86 21.01
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 36.3 20.86
CDX76138 Canola plasma membrane 39.86 20.86
CDY43612 Canola peroxisome, plasma membrane, vacuole 36.65 20.72
CDX91502 Canola plasma membrane 37.37 20.71
CDY18359 Canola plasma membrane 37.72 20.58
CDX74877 Canola plasma membrane 37.37 20.39
CDX93291 Canola plasma membrane 37.37 20.39
CDY22352 Canola plasma membrane 38.79 20.37
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 39.5 20.33
CDY14883 Canola plasma membrane, vacuole 38.43 20.19
CDY32949 Canola plasma membrane 32.03 20.0
CDY22354 Canola golgi, plasma membrane, vacuole 32.03 19.4
CDX74875 Canola plasma membrane 37.37 19.23
CDY60902 Canola plasma membrane 38.79 18.76
CDY52378 Canola extracellular, plasma membrane 30.25 18.6
CDX95146 Canola endoplasmic reticulum, plasma membrane 27.76 17.57
CDX96889 Canola plasma membrane, vacuole 30.96 17.3
CDY50482 Canola extracellular, mitochondrion 1.78 8.77
CDX88277 Canola cytosol, extracellular 3.2 8.49
GSMUA_Achr4P09810_001 Banana peroxisome, plasma membrane, plastid 11.03 7.52
CDX88275 Canola extracellular, plasma membrane, vacuole 2.85 3.08
CDY31502 Canola plasma membrane 2.14 2.28
CDY40417 Canola endoplasmic reticulum, extracellular 0.36 2.08
CDY32950 Canola cytosol 0.71 2.06
CDX96882 Canola plasma membrane 0.36 0.52
CDY14876 Canola plasma membrane 0.36 0.52
CDX84703 Canola plasma membrane 0.36 0.35
CDY14880 Canola extracellular 0.0 0.0
CDY14879 Canola endoplasmic reticulum, golgi 0.0 0.0
CDY32942 Canola plasma membrane 0.0 0.0
CDX96884 Canola cytosol, plasma membrane, vacuole 0.0 0.0
CDY32067 Canola golgi, plasma membrane, vacuole 0.0 0.0
CDY43613 Canola cytosol, extracellular, golgi 0.0 0.0
CDY32947 Canola extracellular, golgi, plastid 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078K439UniProt:A0A078K439EnsemblPlants:CDY72521
ProteinID:CDY72521ProteinID:CDY72521.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00030302001
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850
PANTHER:PTHR24064PANTHER:PTHR24064:SF210SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EEFA11SEG:seg
Description
BnaCnng78100DBnaCnng78100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K439]
Coordinates
chrLK051550:+:1078..1923
Molecular Weight (calculated)
31193.3 Da
IEP (calculated)
6.128
GRAVY (calculated)
0.165
Length
281 amino acids
Sequence
(BLAST)
001: MSESILSQIA EDSSSEPPQP PSSSSYKLFS RRFFSLHGRD LFAASANWFL VDVVFYTSNL LLSQIFTFSN KPPNSTNVYD SAFEVAKVAA IVAACSTIPG
101: YWFTVYFIDR VGRVKIQIMG FFLMAVVYLA AGIPYSWYWS KHEKTNKGFM VLYGLIFFFS NFGPNTTTFI IPAELFPTRF RSTCHGISGA AGKLGAIVGT
201: VGFLWATKHE DEDKEDIFPD VKRVRIAFLI LGGVCIAGVL VTYFFTRETM GRSLEENEED EIGTTVAPGG SSSANELLPR Q
Best Arabidopsis Sequence Match ( AT1G20860.1 )
(BLAST)
001: MPIKVLSSLD VARTQWYHFK AIIVAGMGLF TDAYDLFCIA PVMKMISHVY YNGDSINTAV LSTSYAIALL GTATGQLVFG YLGDRVGRRR VYGLCLIIMI
101: LSSFGCGFSV CTTRRSCVMV SLGFFRFFLG LGIGGDYPLS ATIMSEFANK RTRGAFIAAV FSMQGLGILV SSAVTMAVCV AFKRSGGGLE VDAAAPTEAD
201: LAWRLILMIG ALPAALTFYW RMLMPETARY TALVENNIVQ AAKDMQRVMS RSHISDEATT DPPPPPPPPS YKLFSRCFFR LHGRDLFAAS FNWFLVDIVF
301: YTSNLLLSHI FSHYSKKPST AENVYDAAFE VAELGAIIAA CSTIPGYWFT VYFIDKIGRV KIQIMGFFFM AVIYLVAGIP YSWYWSKHEH NNKGFMVLYG
401: LVFFFCNFGP NTTTFIIPAE HFPARFRSTC HGISGAAGKL GAIVGTVGFL WATKKMESDD KNQIYPEVNR MRIAFLILGG VCIAGILVTY FFTKETMGRS
501: LEENEHDQDN NAESEDEPQI VDGQSSVSTL LQTR
Arabidopsis Description
PHT1;8phosphate transporter 1;8 [Source:TAIR;Acc:AT1G20860]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.