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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14876 Canola plasma membrane 100.0 100.0
CDY32950 Canola cytosol 38.86 77.32
CDY14880 Canola extracellular 26.94 61.9
CDY43613 Canola cytosol, extracellular, golgi 45.08 60.42
CDY40417 Canola endoplasmic reticulum, extracellular 14.51 58.33
CDY32947 Canola extracellular, golgi, plastid 36.27 58.33
CDX96884 Canola cytosol, plasma membrane, vacuole 48.19 56.02
CDY32067 Canola golgi, plasma membrane, vacuole 32.12 55.36
CDY32942 Canola plasma membrane 68.39 54.55
AT4G08878.1 Thale cress plasma membrane 74.61 51.43
CDY14879 Canola endoplasmic reticulum, golgi 31.61 46.56
CDX84703 Canola plasma membrane 66.32 45.23
CDX88275 Canola extracellular, plasma membrane, vacuole 49.74 36.92
Bra035976.1-P Field mustard plasma membrane 95.85 35.78
CDY31502 Canola plasma membrane 47.15 34.6
AT5G43340.1 Thale cress plasma membrane 87.05 32.56
CDY32949 Canola plasma membrane 68.91 29.56
CDX95146 Canola endoplasmic reticulum, plasma membrane 67.36 29.28
CDY52378 Canola extracellular, plasma membrane 67.88 28.67
CDX88277 Canola cytosol, extracellular 15.54 28.3
CDY22354 Canola golgi, plasma membrane, vacuole 67.88 28.23
CDY60903 Canola plasma membrane 68.91 27.25
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 68.91 27.2
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 68.91 27.2
CDY43612 Canola peroxisome, plasma membrane, vacuole 68.39 26.56
CDX91502 Canola plasma membrane 68.39 26.04
CDX93291 Canola plasma membrane 69.43 26.02
CDY18359 Canola plasma membrane 69.43 26.02
CDY13225 Canola plasma membrane 69.43 26.02
CDY07686 Canola plasma membrane 69.95 25.86
CDX74877 Canola plasma membrane 68.91 25.83
CDX96889 Canola plasma membrane, vacuole 66.32 25.45
CDY14881 Canola plasma membrane 62.18 25.37
CDX96886 Canola plasma membrane 62.18 25.37
CDX96885 Canola plasma membrane 62.18 25.37
CDY62546 Canola plasma membrane 67.88 25.14
CDX78256 Canola plasma membrane 68.91 25.05
CDX73457 Canola plasma membrane 68.91 25.05
CDX76138 Canola plasma membrane 69.43 24.95
CDX91503 Canola plasma membrane 68.91 24.95
CDX74874 Canola plasma membrane 68.39 24.77
CDY22352 Canola plasma membrane 67.88 24.49
CDX74875 Canola plasma membrane 68.39 24.18
CDY14883 Canola plasma membrane, vacuole 66.84 24.11
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 67.36 23.81
CDY60902 Canola plasma membrane 67.88 22.55
CDY32943 Canola plasma membrane 50.26 22.1
CDY47815 Canola plasma membrane 37.31 21.49
CDX88279 Canola plasma membrane 48.19 20.22
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 45.6 19.82
CDX87599 Canola plasma membrane 51.3 18.33
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 49.74 17.81
CDX87598 Canola plasma membrane 47.15 17.81
CDX68097 Canola plasma membrane 49.22 17.79
CDX88274 Canola plasma membrane 48.7 17.47
CDX85949 Canola plasma membrane 49.22 17.24
CDY43616 Canola plasma membrane 35.23 16.43
CDX87600 Canola plasma membrane 48.19 15.98
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 37.31 14.23
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 37.31 14.09
CDY31503 Canola plasma membrane, plastid 24.87 11.09
CDY29499 Canola plasma membrane, plastid 24.87 11.03
CDY14878 Canola cytosol 4.15 8.7
CDY71773 Canola plasma membrane 13.99 8.18
CDY14875 Canola mitochondrion 4.66 5.45
CDX96881 Canola mitochondrion 4.66 5.45
CDX88276 Canola golgi, plasma membrane 10.36 5.45
CDY43610 Canola mitochondrion 4.15 4.97
CDY32951 Canola mitochondrion 3.63 4.7
CDY14877 Canola vacuole 0.52 0.88
CDY50481 Canola plasma membrane 0.52 0.46
CDY32948 Canola mitochondrion 0.52 0.43
CDX96883 Canola cytosol, peroxisome, plasma membrane 0.52 0.4
CDY40416 Canola plasma membrane 0.52 0.38
CDY72521 Canola plastid 0.52 0.36
CDY31501 Canola plasma membrane 0.52 0.35
CDY50482 Canola extracellular, mitochondrion 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078FNZ8UniProt:A0A078FNZ8EnsemblPlants:CDX96882
ProteinID:CDX96882ProteinID:CDX96882.1ProteinID:CDY14876.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00103757001InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083
PFscan:PS50850PANTHER:PTHR24064PANTHER:PTHR24064:SF331SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EEE054
SEG:seg:::::
Description
BnaC02g30200DBnaA02g22180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNZ8]
Coordinates
chrLK031896:-:18481..19628
Molecular Weight (calculated)
20518.3 Da
IEP (calculated)
9.213
GRAVY (calculated)
0.577
Length
193 amino acids
Sequence
(BLAST)
001: MANEGQISIL RALDSAKTQW YHVTTVIISG MGFFTDSYDL FVISLITKLL GRIYYQKPGS SSPGSLPDGI SATVSGVAFA GTFLGQIFFG CLGDKLGRKR
101: VYGLTLVIMT VCSICSGLSL GTDPKSVMTT LCFFRFWLGF GIGGDYPLSA TIMSEYANKR TRGAFIASVF AMQGVGILAA GGVSCLKPLV TLL
Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)
001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV
Arabidopsis Description
PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.