Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005071.1-P | Field mustard | plasma membrane | 98.62 | 98.62 |
| CDX74877 | Canola | plasma membrane | 99.21 | 97.67 |
| CDY18359 | Canola | plasma membrane | 95.07 | 93.59 |
| CDX93291 | Canola | plasma membrane | 94.87 | 93.4 |
| CDX74875 | Canola | plasma membrane | 99.01 | 91.94 |
| CDY32067 | Canola | golgi, plasma membrane, vacuole | 20.12 | 91.07 |
| AT2G38940.1 | Thale cress | plasma membrane | 94.28 | 89.51 |
| CDX74874 | Canola | plasma membrane | 91.32 | 86.87 |
| CDX91503 | Canola | plasma membrane | 90.53 | 86.12 |
| CDY62546 | Canola | plasma membrane | 88.36 | 85.99 |
| CDY07686 | Canola | plasma membrane | 87.57 | 85.06 |
| CDY13225 | Canola | plasma membrane | 85.4 | 84.08 |
| CDX76138 | Canola | plasma membrane | 87.57 | 82.68 |
| CDY14880 | Canola | extracellular | 13.61 | 82.14 |
| CDX73457 | Canola | plasma membrane | 85.6 | 81.73 |
| CDY14877 | Canola | vacuole | 18.34 | 81.58 |
| CDX78256 | Canola | plasma membrane | 85.4 | 81.54 |
| CDY32949 | Canola | plasma membrane | 70.41 | 79.33 |
| VIT_07s0005g03290.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 82.05 | 79.24 |
| CDY40417 | Canola | endoplasmic reticulum, extracellular | 7.5 | 79.17 |
| CDY40416 | Canola | plasma membrane | 41.03 | 79.09 |
| CDX96884 | Canola | cytosol, plasma membrane, vacuole | 25.84 | 78.92 |
| CDY32948 | Canola | mitochondrion | 35.9 | 78.79 |
| VIT_07s0005g03300.t01 | Wine grape | golgi, plasma membrane, vacuole | 35.9 | 78.79 |
| CDY43613 | Canola | cytosol, extracellular, golgi | 22.09 | 77.78 |
| KRH32181 | Soybean | extracellular | 79.29 | 77.16 |
| CDY43612 | Canola | peroxisome, plasma membrane, vacuole | 75.35 | 76.86 |
| CDY50480 | Canola | endoplasmic reticulum, golgi, plasma membrane | 73.96 | 76.69 |
| CDY32947 | Canola | extracellular, golgi, plastid | 18.15 | 76.67 |
| CDY60903 | Canola | plasma membrane | 73.77 | 76.64 |
| CDY22353 | Canola | endoplasmic reticulum, golgi, plasma membrane | 73.77 | 76.48 |
| CDY14881 | Canola | plasma membrane | 70.81 | 75.9 |
| CDX96885 | Canola | plasma membrane | 70.81 | 75.9 |
| CDX96886 | Canola | plasma membrane | 70.81 | 75.9 |
| KRH67373 | Soybean | plasma membrane | 80.28 | 75.51 |
| KRG95659 | Soybean | plasma membrane | 80.28 | 75.51 |
| CDY22354 | Canola | golgi, plasma membrane, vacuole | 68.84 | 75.22 |
| CDX84703 | Canola | plasma membrane | 41.81 | 74.91 |
| CDY52378 | Canola | extracellular, plasma membrane | 67.46 | 74.84 |
| Solyc09g066410.1.1 | Tomato | endoplasmic reticulum | 77.91 | 74.67 |
| CDY32943 | Canola | plasma membrane | 64.5 | 74.49 |
| CDX95146 | Canola | endoplasmic reticulum, plasma membrane | 65.09 | 74.32 |
| CDY14879 | Canola | endoplasmic reticulum, golgi | 19.13 | 74.05 |
| Solyc06g034200.1.1 | Tomato | plasma membrane | 77.51 | 73.6 |
| CDY22352 | Canola | plasma membrane | 77.32 | 73.27 |
| CDY47815 | Canola | plasma membrane | 48.13 | 72.84 |
| CDY71773 | Canola | plasma membrane | 46.55 | 71.52 |
| CDY32944 | Canola | endoplasmic reticulum, golgi, plasma membrane | 62.52 | 71.4 |
| CDY14883 | Canola | plasma membrane, vacuole | 75.15 | 71.22 |
| CDX79505 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 76.53 | 71.06 |
| CDY32942 | Canola | plasma membrane | 33.73 | 70.66 |
| CDY43616 | Canola | plasma membrane | 57.2 | 70.05 |
| CDX96889 | Canola | plasma membrane, vacuole | 69.03 | 69.58 |
| CDX96882 | Canola | plasma membrane | 26.04 | 68.39 |
| CDY14876 | Canola | plasma membrane | 26.04 | 68.39 |
| CDY60902 | Canola | plasma membrane | 77.91 | 67.99 |
| CDY50481 | Canola | plasma membrane | 28.99 | 67.74 |
| CDY32950 | Canola | cytosol | 12.62 | 65.98 |
| CDX96883 | Canola | cytosol, peroxisome, plasma membrane | 32.35 | 65.86 |
| CDY32951 | Canola | mitochondrion | 19.33 | 65.77 |
| CDY43610 | Canola | mitochondrion | 19.53 | 61.49 |
| GSMUA_Achr4P26760_001 | Banana | extracellular | 17.16 | 60.84 |
| CDX96881 | Canola | mitochondrion | 19.33 | 59.39 |
| CDY14875 | Canola | mitochondrion | 19.13 | 58.79 |
| Solyc09g073010.1.1 | Tomato | golgi, peroxisome, plasma membrane | 45.17 | 58.27 |
| CDY50482 | Canola | extracellular, mitochondrion | 6.31 | 56.14 |
| CDY14878 | Canola | cytosol | 9.86 | 54.35 |
| CDX88279 | Canola | plasma membrane | 44.38 | 48.91 |
| CDX88275 | Canola | extracellular, plasma membrane, vacuole | 25.05 | 48.85 |
| CDX88277 | Canola | cytosol, extracellular | 10.06 | 48.11 |
| CDX87598 | Canola | plasma membrane | 46.15 | 45.79 |
| CDX87599 | Canola | plasma membrane | 48.13 | 45.19 |
| CDX88274 | Canola | plasma membrane | 47.73 | 44.98 |
| CDX68097 | Canola | plasma membrane | 47.34 | 44.94 |
| CDY31502 | Canola | plasma membrane | 23.27 | 44.87 |
| CDY45985 | Canola | endoplasmic reticulum, plasma membrane, plastid | 46.75 | 43.97 |
| CDX85949 | Canola | plasma membrane | 47.14 | 43.38 |
| CDX88276 | Canola | golgi, plasma membrane | 30.77 | 42.51 |
| CDY31503 | Canola | plasma membrane, plastid | 36.09 | 42.26 |
| CDX96616 | Canola | golgi, mitochondrion, plasma membrane, plastid | 42.21 | 41.88 |
| CDY29499 | Canola | plasma membrane, plastid | 35.9 | 41.84 |
| CDX87600 | Canola | plasma membrane | 47.93 | 41.75 |
| CDY33652 | Canola | golgi, mitochondrion, plasma membrane, plastid | 41.62 | 41.7 |
| CDY72521 | Canola | plastid | 20.71 | 37.37 |
| CDY31501 | Canola | plasma membrane | 21.1 | 37.28 |
Protein Annotations
| MapMan:24.2.2.6 | MapMan:25.3.2.1 | GO:A0A078DRI8 | EnsemblPlants:CDX91502 | ProteinID:CDX91502 | ProteinID:CDX91502.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00152867001 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PFscan:PS50850 | PANTHER:PTHR24064 |
| PANTHER:PTHR24064:SF341 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0004EDC4F8 | SEG:seg | : |
Description
BnaC04g06480D
Coordinates
chrLK031867:+:1486750..1489245
Molecular Weight (calculated)
55437.9 Da
IEP (calculated)
9.025
GRAVY (calculated)
0.359
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGDQLKVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVPGSA KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSVASGLSFG HEPKTVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPAPAYA
201: EDALRSTIPQ ADLVWRIILM VGAIPAAMTY YSRSKMPETA RYTALVAKDA KLAASDMSRV LQVEIEAEQE KVEEISNNKS KAFSLFSKEF MKRHGLHLLG
301: WIPPAQTMNA IQELFKIARA QTLIALCSTV PGYWFTVAFI DVIGRFAIQM MGFFFMTVFM FALAIPYNHW THKENRIGFV IMYSLTFFFA NFGPNATTFV
401: VPAEIFPARF RSTCHGISAA SGKLGAMVGA FGFLYLAQSP DKNKTDAGYP PGIGVRNSLL VLGVVNFLGI LFTFLVPESK GKSLEEMSGE NEDNENTTSD
501: SRTVPIV
101: YGMTLMVMVL CSVASGLSFG HEPKTVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPAPAYA
201: EDALRSTIPQ ADLVWRIILM VGAIPAAMTY YSRSKMPETA RYTALVAKDA KLAASDMSRV LQVEIEAEQE KVEEISNNKS KAFSLFSKEF MKRHGLHLLG
301: WIPPAQTMNA IQELFKIARA QTLIALCSTV PGYWFTVAFI DVIGRFAIQM MGFFFMTVFM FALAIPYNHW THKENRIGFV IMYSLTFFFA NFGPNATTFV
401: VPAEIFPARF RSTCHGISAA SGKLGAMVGA FGFLYLAQSP DKNKTDAGYP PGIGVRNSLL VLGVVNFLGI LFTFLVPESK GKSLEEMSGE NEDNENTTSD
501: SRTVPIV
001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV
Arabidopsis Description
PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.