Factsheet for AT2G38940.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005070.1-P	Field mustard	plasma membrane	94.76	94.76
CDX91502	Canola	plasma membrane	89.51	94.28
CDX74877	Canola	plasma membrane	90.82	94.17
Bra005071.1-P	Field mustard	plasma membrane	89.14	93.89
CDX74875	Canola	plasma membrane	91.01	89.01
AT3G54700.1	Thale cress	plasma membrane	88.58	88.41
VIT_07s0005g03290.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	82.77	84.19
KRH32181	Soybean	extracellular	81.46	83.49
KRG95659	Soybean	plasma membrane	82.96	82.19
KRH67373	Soybean	plasma membrane	82.77	82.0
Solyc09g066410.1.1	Tomato	endoplasmic reticulum	79.03	79.77
VIT_07s0005g03300.t01	Wine grape	golgi, plasma membrane, vacuole	34.27	79.22
AT5G43360.1	Thale cress	plasma membrane	77.15	79.08
Solyc06g034200.1.1	Tomato	plasma membrane	78.65	78.65
AT5G43370.1	Thale cress	endoplasmic reticulum, plasma membrane	76.59	78.05
AT5G43350.1	Thale cress	endoplasmic reticulum, plasma membrane	76.59	78.05
AT2G32830.1	Thale cress	plasma membrane	76.78	75.65
AT5G43340.1	Thale cress	plasma membrane	65.36	67.64
AT4G08878.1	Thale cress	plasma membrane	33.52	63.93
AT4G08895.1	Thale cress	mitochondrion	18.35	63.23
Solyc09g073010.1.1	Tomato	golgi, peroxisome, plasma membrane	44.57	60.56
GSMUA_Achr4P26760_001	Banana	extracellular	16.1	60.14
AT1G76430.1	Thale cress	golgi, plasma membrane, vacuole	46.07	46.24
AT1G20860.2	Thale cress	cytosol, mitochondrion, plasma membrane	46.63	42.49
PGSC0003DMT400026633	Potato	cytosol, golgi	32.4	32.34

Protein Annotations

MapMan:24.2.2.6	MapMan:25.3.2.1	EntrezGene:818479	UniProt:A0A178VRB1	ProteinID:AAB88291.1	ProteinID:AAC79607.1
ProteinID:AEC09615.1	ArrayExpress:AT2G38940	EnsemblPlantsGene:AT2G38940	RefSeq:AT2G38940	TAIR:AT2G38940	RefSeq:AT2G38940-TAIR-G
EnsemblPlants:AT2G38940.1	TAIR:AT2G38940.1	Symbol:ATPT2	ProteinID:BAA34398.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005315	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005773	GO:GO:0005794	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006817	GO:GO:0008150	GO:GO:0009506	GO:GO:0009719	GO:GO:0009737
GO:GO:0015293	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	RefSeq:NP_181428.1	ProteinID:OAP08366.1	PFAM:PF00083
PO:PO:0000005	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0009025	PO:PO:0025195
PO:PO:0025281	PFscan:PS50850	PANTHER:PTHR24064	PANTHER:PTHR24064:SF341	InterPro:Phos_permease	UniProt:Q96303
SUPFAM:SSF103473	TIGRFAMs:TIGR00887	TMHMM:TMhelix	EMBL:U62331	UniParc:UPI0000048617	SEG:seg

Description

PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]

Coordinates

chr2:+:16257157..16260253

Molecular Weight (calculated)

58602.5 Da

IEP (calculated)

8.325

GRAVY (calculated)

0.323

Length

534 amino acids

Sequence
(BLAST)

001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.