Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
25724908
|
msms PMID:
25724908
doi
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19554 | Soybean | golgi, plasma membrane, vacuole | 30.9 | 93.06 |
| KRG95659 | Soybean | plasma membrane | 87.14 | 84.23 |
| KRH67373 | Soybean | plasma membrane | 86.95 | 84.04 |
| CDY13225 | Canola | plasma membrane | 81.96 | 82.91 |
| VIT_07s0005g03290.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 83.3 | 82.67 |
| AT2G38940.1 | Thale cress | plasma membrane | 83.49 | 81.46 |
| Bra017093.1-P | Field mustard | plasma membrane | 83.11 | 81.09 |
| CDY18359 | Canola | plasma membrane | 79.85 | 80.78 |
| CDY62546 | Canola | plasma membrane | 80.61 | 80.61 |
| Bra007090.1-P | Field mustard | plasma membrane | 82.15 | 80.6 |
| CDX73457 | Canola | plasma membrane | 82.15 | 80.6 |
| CDX78256 | Canola | plasma membrane | 82.15 | 80.6 |
| CDX93291 | Canola | plasma membrane | 79.65 | 80.58 |
| Bra005070.1-P | Field mustard | plasma membrane | 82.53 | 80.52 |
| CDX74874 | Canola | plasma membrane | 82.15 | 80.3 |
| Bra005069.1-P | Field mustard | plasma membrane | 82.15 | 80.3 |
| CDX91503 | Canola | plasma membrane | 82.15 | 80.3 |
| CDX76138 | Canola | plasma membrane | 82.73 | 80.26 |
| Bra014798.1-P | Field mustard | plasma membrane | 82.73 | 80.26 |
| AT3G54700.1 | Thale cress | plasma membrane | 82.15 | 80.0 |
| CDX74877 | Canola | plasma membrane | 78.89 | 79.81 |
| CDY32067 | Canola | golgi, plasma membrane, vacuole | 17.08 | 79.46 |
| Bra017275.1-P | Field mustard | plasma membrane | 80.04 | 79.43 |
| CDY07686 | Canola | plasma membrane | 79.46 | 79.31 |
| CDX91502 | Canola | plasma membrane | 77.16 | 79.29 |
| Solyc09g066410.1.1 | Tomato | endoplasmic reticulum | 80.23 | 79.02 |
| Bra005071.1-P | Field mustard | plasma membrane | 76.78 | 78.9 |
| Bra000107.1-P | Field mustard | plasma membrane | 80.81 | 78.69 |
| VIT_07s0005g03300.t01 | Wine grape | golgi, plasma membrane, vacuole | 34.74 | 78.36 |
| CDY40416 | Canola | plasma membrane | 38.58 | 76.43 |
| Solyc06g034200.1.1 | Tomato | plasma membrane | 78.12 | 76.22 |
| KRH34475 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 76.97 | 76.09 |
| KRG92315 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 76.78 | 75.9 |
| CDX74875 | Canola | plasma membrane | 78.69 | 75.09 |
| KRH31705 | Soybean | mitochondrion | 76.58 | 74.86 |
| KRH69124 | Soybean | plasma membrane | 76.01 | 74.3 |
| KRG92314 | Soybean | cytosol, golgi, plasma membrane | 75.62 | 73.51 |
| KRH34477 | Soybean | extracellular | 75.62 | 73.51 |
| CDY40417 | Canola | endoplasmic reticulum, extracellular | 6.33 | 68.75 |
| Solyc09g073010.1.1 | Tomato | golgi, peroxisome, plasma membrane | 47.98 | 63.61 |
| GSMUA_Achr4P26760_001 | Banana | extracellular | 16.51 | 60.14 |
| KRH15976 | Soybean | plasma membrane | 59.31 | 58.86 |
| KRH18132 | Soybean | plasma membrane | 58.93 | 58.03 |
| KRH16955 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 55.09 | 54.25 |
| KRH50469 | Soybean | golgi, mitochondrion, plasma membrane, plastid | 51.82 | 52.84 |
| KRG89401 | Soybean | golgi, mitochondrion, plasma membrane, plastid | 51.25 | 52.77 |
| PGSC0003DMT400026633 | Potato | cytosol, golgi | 33.01 | 32.15 |
Protein Annotations
| EntrezGene:100786638 | MapMan:24.2.2.6 | MapMan:25.3.2.1 | ProteinID:ACP19340.1 | EMBL:ACUP02006102 | UniProt:C3UZD2 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_10G036800 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005315 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006817 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0022891 | GO:GO:0055085 | InterPro:IPR020846 |
| EnsemblPlants:KRH32181 | ProteinID:KRH32181 | ProteinID:KRH32181.1 | InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf |
| PFAM:PF00083 | PFscan:PS50850 | PANTHER:PTHR24064 | PANTHER:PTHR24064:SF341 | InterPro:Phos_permease | SUPFAM:SSF103473 |
| TIGRFAMs:TIGR00887 | TMHMM:TMhelix | UniParc:UPI00019D5A26 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:3233051..3236286
Molecular Weight (calculated)
57313.0 Da
IEP (calculated)
8.720
GRAVY (calculated)
0.363
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKEQVQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVDGAA KPGSLPPNVS AAVNGVAFVG TLSGQLFFGW LGDKMGRKKV
101: YGMTLALMVI ASIASGLSFG HDAKTVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYSNKKT RGAFIAAVFA MQGFGILAGG VFAIIIASVF KSKFDSPPYE
201: VDPLGSTVPQ ADYVWRIILM FGAIPAAMTY YSRSKMPETA RYTALVAKNM EKAAADMSKV MNMEIQAEPK KEEEAQAKSY GLFSKEFMSR HGLHLLGTTS
301: TWFLLDIAFY SQNLFQKDIF SAIGWIPPAK TMNALEEVFF IARAQTLIAL CSTVPGYWFT VAFIDRIGRF AIQLMGFFFM TIFMFALAIP YDHWTLRENR
401: IGFVVIYSLT FFFANFGPNA TTFVVPAEIF PARFRSTCHG ISSASGKLGA MVGAFGFLYL AQNQDPSKAD AGYPAGIGVR NSLLVLGVIN ILGFMFTFLV
501: PEAKGRSLEE ISGEQEEETK V
101: YGMTLALMVI ASIASGLSFG HDAKTVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYSNKKT RGAFIAAVFA MQGFGILAGG VFAIIIASVF KSKFDSPPYE
201: VDPLGSTVPQ ADYVWRIILM FGAIPAAMTY YSRSKMPETA RYTALVAKNM EKAAADMSKV MNMEIQAEPK KEEEAQAKSY GLFSKEFMSR HGLHLLGTTS
301: TWFLLDIAFY SQNLFQKDIF SAIGWIPPAK TMNALEEVFF IARAQTLIAL CSTVPGYWFT VAFIDRIGRF AIQLMGFFFM TIFMFALAIP YDHWTLRENR
401: IGFVVIYSLT FFFANFGPNA TTFVVPAEIF PARFRSTCHG ISSASGKLGA MVGAFGFLYL AQNQDPSKAD AGYPAGIGVR NSLLVLGVIN ILGFMFTFLV
501: PEAKGRSLEE ISGEQEEETK V
001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV
Arabidopsis Description
PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.