CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34475	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	98.29	98.29
VIT_05s0049g00940.t01	Wine grape	plasma membrane	83.3	81.9
PGSC0003DMT400044370	Potato	endoplasmic reticulum, plasma membrane	82.92	81.23
Solyc09g090070.1.1	Tomato	plasma membrane	82.35	80.67
PGSC0003DMT400044368	Potato	endoplasmic reticulum, plasma membrane	80.27	79.07
Solyc09g090080.1.1	Tomato	endoplasmic reticulum, plasma membrane	79.89	78.84
KRH19554	Soybean	golgi, plasma membrane, vacuole	25.62	78.03
KRH69124	Soybean	plasma membrane	78.18	77.3
KRG95659	Soybean	plasma membrane	78.94	77.18
KRH67373	Soybean	plasma membrane	78.94	77.18
KRH31705	Soybean	mitochondrion	77.99	77.11
KRH32181	Soybean	extracellular	75.9	76.78
KRG92314	Soybean	cytosol, golgi, plasma membrane	77.42	76.12
KRH34477	Soybean	extracellular	76.85	75.56
KRH15976	Soybean	plasma membrane	60.34	60.57
KRH18132	Soybean	plasma membrane	59.96	59.74
KRH16955	Soybean	endoplasmic reticulum, golgi, plasma membrane	57.12	56.9
KRH50469	Soybean	golgi, mitochondrion, plasma membrane, plastid	51.99	53.62
KRG89401	Soybean	golgi, mitochondrion, plasma membrane, plastid	50.85	52.96

Protein Annotations

EntrezGene:100792711	MapMan:24.2.2.6	MapMan:25.3.2.1	EMBL:ACUP02012739	ncoils:Coil	UniProt:E8Z9A8
EMBL:FJ797410	EnsemblPlantsGene:GLYMA_20G204100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005315	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006817	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0022891	GO:GO:0055085	InterPro:IPR020846
EMBL:JQ518271	EnsemblPlants:KRG92315	ProteinID:KRG92315	ProteinID:KRG92315.1	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PFscan:PS50850	PANTHER:PTHR24064	PANTHER:PTHR24064:SF429	InterPro:Phos_permease
SUPFAM:SSF103473	TIGRFAMs:TIGR00887	TMHMM:TMhelix	UniParc:UPI0001F6F61A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr20:+:44099946..44103823

Molecular Weight (calculated)

58110.3 Da

IEP (calculated)

8.998

GRAVY (calculated)

0.386

Length

527 amino acids

Sequence
(BLAST)

001: MARDQLQVLN ALDVAKTQWY HFTAIVIAGM GFFTDAYDLF CISLVTKLLG RIYYFEGHDK PGSLPSNVSA AINGVAFCGT LAGQLFFGWL GDKMGRKRVY
101: GMTLMLMVIC SIASGLSFGK DPKAVMATLC FFRFWLGFGI GGDYPLSATI MSEYANRKTR GAFIAAVFAM QGFGILAGGT VAIVVSSAFK ALYPAPAFQV
201: NPVLSTVPQA DYVWRIILMF GALPALLTYY WRMKMPETAR YTALVAKNAK QAAADMSKVL QVEIEAEQEK VEQLDTRRGN EFGLFTKQFL RRHGLHLVGT
301: ATTWFLLDIA YYSQNLFQKD IFSTIGWIPE AKTMNAVEEV FKIARAQTLI ALCSTVPGYW FTVALIDKMG RFTIQLMGFF FMTVFMFALA IPYHHWTMKG
401: NQIGFVVLYS LTFFFANFGP NATTFVVPAE IFPARLRSTC HGISAAAGKA GAMVGAFGYL YAQNAIGLRN TLIVLGVINF LGMLFTFLVP ESKGKSLEEM
501: SGEAEEETTA ATRESAMEAG LEVRPSV

Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)

001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV

Arabidopsis Description

PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.