Factsheet for VIT_05s0049g00940.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g090070.1.1	Tomato	plasma membrane	85.07	84.76
Solyc09g090080.1.1	Tomato	endoplasmic reticulum, plasma membrane	84.33	84.64
VIT_07s0005g03290.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	82.65	84.38
PGSC0003DMT400044370	Potato	endoplasmic reticulum, plasma membrane	84.51	84.2
PGSC0003DMT400044368	Potato	endoplasmic reticulum, plasma membrane	83.58	83.74
KRH34475	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	82.09	83.49
KRG92315	Soybean	endoplasmic reticulum, golgi, plasma membrane	81.9	83.3
VIT_05s0049g00920.t01	Wine grape	plasma membrane	83.4	83.09
VIT_07s0005g03300.t01	Wine grape	golgi, plasma membrane, vacuole	34.33	79.65
VIT_05s0049g00930.t01	Wine grape	plasma membrane	82.84	73.75
VIT_13s0067g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	60.82	60.93
VIT_16s0050g02380.t01	Wine grape	plasma membrane	57.84	59.96
VIT_16s0050g02370.t01	Wine grape	peroxisome, plasma membrane, plastid	57.65	56.8
VIT_18s0122g00780.t01	Wine grape	cytosol, peroxisome, plasma membrane	50.93	51.7

Protein Annotations

EntrezGene:100257925	wikigene:100257925	MapMan:24.2.2.6	MapMan:25.3.2.1	ProteinID:AAS58442	ProteinID:AAS58442.1
EMBL:AM437476	EMBL:AY463370	ProteinID:CAN76105	ProteinID:CAN76105.1	ProteinID:CCB48578	ProteinID:CCB48578.1
ncoils:Coil	UniProt:F6H8P9	EMBL:FN595496	GO:GO:0003674	GO:GO:0005215	GO:GO:0005315
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006817
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
EntrezGene:LOC100257925	wikigene:LOC100257925	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PFscan:PS50850	PANTHER:PTHR24064	PANTHER:PTHR24064:SF341	InterPro:Phos_permease	SUPFAM:SSF103473	TIGR:TC55022
TIGRFAMs:TIGR00887	TMHMM:TMhelix	UniParc:UPI00019834B0	ArrayExpress:VIT_05s0049g00940	EnsemblPlantsGene:VIT_05s0049g00940	EnsemblPlants:VIT_05s0049g00940.t01
unigene:Vvi.21970	unigene:Vvi.8179	RefSeq:XP_002285153	RefSeq:XP_002285153.1	RefSeq:XP_019075709.1	SEG:seg

Description

No Description!

Coordinates

chr5:+:7951247..7952979

Molecular Weight (calculated)

58904.0 Da

IEP (calculated)

9.365

GRAVY (calculated)

0.304

Length

536 amino acids

Sequence
(BLAST)

001: MAKNQLQVLN ALDVAKTQWY HFTAIVIAGM GFFTDAYDLF CISLVTKLLG RIYYHSPGDA KPGTLPPNVS AAVNGVAFCG TLAGQLFFGW LGDKMGRKRV
101: YGMTLMLMVI CSVASGLSFG HEAKGVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILTGG IFAIIISASF KAAFPSPTYE
201: IDPVGSTVPQ ADFVWRIILM FGALPAALTY YWRMKMPETA RYTALVAKNA KKAAADMSKV LQVDLEAEQE KVESIQRQGK DFGLFTKQFL RRHGLHLLGT
301: TSTWFLLDIA FYSQNLFQKD IFSAIGWIPA AKTMSALEEV YKIARAQTLI ALCSTVPGYW FTVALIDKMG RFAIQLMGFF FMTVFMFALA IPYNHWTHKE
401: NRIGFVVMYS LTFFFANFGP NATTFVVPAE IFPARLRSTC HGISAAAGKA GAIVGAFGFL YAAQSQDKSK VDKGYPTGIG VKNSLIVLGV VNFLGMLFTF
501: LVPESKGKSL EEMSGENEEE ESPSEESRQQ ARTVPV

Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)

001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV

Arabidopsis Description

PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.