Factsheet for VIT_16s0050g02380.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0050g02370.t01	Wine grape	peroxisome, plasma membrane, plastid	90.91	86.4
PGSC0003DMT400006059	Potato	plasma membrane	81.43	79.58
Solyc06g051860.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	79.88	78.07
PGSC0003DMT400006063	Potato	cytosol, endoplasmic reticulum, plasma membrane	79.3	77.5
GSMUA_Achr3P25060_001	Banana	plasma membrane	63.64	76.87
Solyc06g051850.1.1	Tomato	cytosol, plasma membrane, plastid	80.08	75.96
KRH15976	Soybean	plasma membrane	76.21	75.05
KRH18132	Soybean	plasma membrane	76.79	75.05
HORVU4Hr1G002070.1	Barley	cytosol, endoplasmic reticulum	70.99	66.73
TraesCS4B01G013200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	70.99	66.25
TraesCS4D01G010900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	70.6	66.0
Os01t0657100-01	Rice	plasma membrane	70.6	65.77
TraesCS4A01G301100.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	70.41	65.7
Zm00001d011498_P001	Maize	plasma membrane	70.21	65.52
EES03373	Sorghum	plasma membrane	69.44	64.8
VIT_07s0005g03300.t01	Wine grape	golgi, plasma membrane, vacuole	28.82	64.5
VIT_13s0067g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	63.83	61.68
VIT_07s0005g03290.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	60.15	59.24
VIT_05s0049g00920.t01	Wine grape	plasma membrane	60.35	57.99
VIT_05s0049g00940.t01	Wine grape	plasma membrane	59.96	57.84
VIT_05s0049g00930.t01	Wine grape	plasma membrane	59.96	51.49
VIT_18s0122g00780.t01	Wine grape	cytosol, peroxisome, plasma membrane	49.71	48.67

Protein Annotations

EntrezGene:100253597	wikigene:100253597	MapMan:24.2.2.6	MapMan:25.3.2.1	MapMan:26.9.4.2	ProteinID:CCB47767
ProteinID:CCB47767.1	UniProt:F6H6G5	EMBL:FN595243	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	EntrezGene:LOC100253597	wikigene:LOC100253597
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PFscan:PS50850	PANTHER:PTHR24064
PANTHER:PTHR24064:SF251	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00019857A9	ArrayExpress:VIT_16s0050g02380	EnsemblPlantsGene:VIT_16s0050g02380
EnsemblPlants:VIT_16s0050g02380.t01	RefSeq:XP_002267369	RefSeq:XP_002267369.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:+:19309225..19310778

Molecular Weight (calculated)

57683.8 Da

IEP (calculated)

7.760

GRAVY (calculated)

0.361

Length

517 amino acids

Sequence
(BLAST)

001: MSDGLAVLHA LDSARTQWYH ITAIVIAGMG FFTDAYDLFC ISTVSKLLGR LYYYDPTKDK PGKLPHGVNN FVIGVALVGT LSGQLVFGWL GDKLGRKKVY
101: GMTLILMSIC AICSGLSFGF SNKSVITTLC FFRFWLGFGI GGDYPLSATI MSEYANKKTR GAFIAAVFAM QGVGIVFAGL VSMILSKLFL LKYETVPFSE
201: EPILSTQPEA DYLWRIVLML GALPALLTYY WRMKMPETGR YTALIEGNAK QAAADMGRVL EIEIQAEADK VAEFKAANEY SLWSREFFDR HGRHLIGTMS
301: TWFLLDIAFY SQNLTQKDIF PAMNLVKKDY EVSALREMFE TSRAMFVVAL LGTFPGYWFT VFFIDRIGRF IIQLVGFFMM SLFMLIIGIK YEYLRDDNKW
401: LFAVLYGLTF FFANFGPNST TFVLPAELFP TRVRSTCHAM SAAAGKAGAM IGAFVVATYT LDGKANEIRI AMITMACTNM LGFFCTFLVT ETKGRSLEEI
501: SGEDGGINET EMASRPS

Best Arabidopsis Sequence Match ( AT5G43360.1 )
(BLAST)

001: MADQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RLYYFNPTSA KPGSLPPHVA AAVNGVALCG TLAGQLFFGW LGDKLGRKKV
101: YGITLIMMIL CSVASGLSLG NSAKGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGVGILAGG FVALAVSSIF DKKFPSPTYE
201: QDRFLSTPPQ ADYIWRIIVM FGALPAALTY YWRMKMPETA RYTALVAKNI KQATADMSKV LQTDLELEER VEDDVKDPKK NYGLFSKEFL RRHGLHLLGT
301: TSTWFLLDIA FYSQNLFQKD IFSAIGWIPK AATMNAIHEV FKIARAQTLI ALCSTVPGYW FTVAFIDIIG RFAIQLMGFF MMTVFMFAIA FPYNHWILPD
401: NRIGFVVMYS LTFFFANFGP NATTFIVPAE IFPARLRSTC HGISAATGKA GAIVGAFGFL YAAQPQDKTK TDAGYPPGIG VKNSLIMLGV INFVGMLFTF
501: LVPEPKGKSL EELSGEAEVD K

Arabidopsis Description

PHT1-3Probable inorganic phosphate transporter 1-3 [Source:UniProtKB/Swiss-Prot;Acc:O48639]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.