Factsheet for VIT_18s0122g00780.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50469	Soybean	golgi, mitochondrion, plasma membrane, plastid	69.32	71.62
KRG89401	Soybean	golgi, mitochondrion, plasma membrane, plastid	67.99	70.95
PGSC0003DMT400025887	Potato	cytosol, peroxisome, plasma membrane	68.18	70.73
CDX88275	Canola	extracellular, plasma membrane, vacuole	30.49	61.92
GSMUA_Achr3P03730_001	Banana	cytosol, golgi, plasma membrane	56.06	61.28
CDX88279	Canola	plasma membrane	52.65	60.43
CDX87598	Canola	plasma membrane	57.95	59.88
CDX87599	Canola	plasma membrane	60.98	59.63
Bra016446.1-P	Field mustard	plasma membrane	60.8	59.23
CDY31502	Canola	plasma membrane	29.36	58.94
CDX88276	Canola	golgi, plasma membrane	40.91	58.86
AT1G76430.1	Thale cress	golgi, plasma membrane, vacuole	59.28	58.83
CDY31503	Canola	plasma membrane, plastid	48.11	58.66
CDX68097	Canola	plasma membrane	59.28	58.61
Bra003719.1-P	Field mustard	plasma membrane	59.09	58.43
Bra015745.1-P	Field mustard	golgi, plasma membrane	57.58	58.02
Bra008260.1-P	Field mustard	plasma membrane	59.09	57.99
Bra025850.1-P	Field mustard	plasma membrane	59.47	57.93
CDY33652	Canola	golgi, mitochondrion, plasma membrane, plastid	55.49	57.91
CDY45985	Canola	endoplasmic reticulum, plasma membrane, plastid	59.09	57.88
CDY29499	Canola	plasma membrane, plastid	47.54	57.7
CDX96616	Canola	golgi, mitochondrion, plasma membrane, plastid	55.68	57.53
CDX85949	Canola	plasma membrane	59.47	56.99
CDX88274	Canola	plasma membrane	57.58	56.51
Os06t0325200-01	Rice	cytosol	57.77	55.25
TraesCS7A01G226600.1	Wheat	plasma membrane	58.9	55.14
TraesCS7B01G193000.2	Wheat	plasma membrane	58.71	54.96
TraesCS7D01G227800.1	Wheat	plasma membrane	58.52	54.79
AT1G20860.2	Thale cress	cytosol, mitochondrion, plasma membrane	60.42	54.44
HORVU0Hr1G020720.1	Barley	peroxisome, plasma membrane, plastid	57.77	53.98
CDX87600	Canola	plasma membrane	58.71	53.26
Bra015748.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	58.71	53.26
EER88333	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	57.2	52.71
CDY72521	Canola	plastid	28.03	52.67
VIT_07s0005g03290.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	52.27	52.57
CDY31501	Canola	plasma membrane	28.41	52.26
Os06t0324800-01	Rice	mitochondrion, plasma membrane	57.58	52.23
VIT_05s0049g00920.t01	Wine grape	plasma membrane	52.84	51.86
VIT_05s0049g00940.t01	Wine grape	plasma membrane	51.7	50.93
VIT_07s0005g03300.t01	Wine grape	golgi, plasma membrane, vacuole	22.16	50.65
VIT_16s0050g02380.t01	Wine grape	plasma membrane	48.67	49.71
VIT_13s0067g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	48.86	48.22
VIT_16s0050g02370.t01	Wine grape	peroxisome, plasma membrane, plastid	48.67	47.24
VIT_05s0049g00930.t01	Wine grape	plasma membrane	53.03	46.51
GSMUA_Achr4P09810_001	Banana	peroxisome, plasma membrane, plastid	35.98	46.12

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100251317	wikigene:100251317	MapMan:24.2.2.6	MapMan:25.3.2.1	ProteinID:CCB62674
ProteinID:CCB62674.1	UniProt:F6I6V6	EMBL:FN596759	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	EntrezGene:LOC100251317	wikigene:LOC100251317
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR24064	PANTHER:PTHR24064:SF210	SUPFAM:SSF103473	InterPro:Sugar_transporter_CS	TIGR:TC53305	TMHMM:TMhelix
UniParc:UPI000210ABA5	ArrayExpress:VIT_18s0122g00780	EnsemblPlantsGene:VIT_18s0122g00780	EnsemblPlants:VIT_18s0122g00780.t01	RefSeq:XP_002274930	RefSeq:XP_002274930.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr18:+:579088..582030

Molecular Weight (calculated)

58784.7 Da

IEP (calculated)

7.601

GRAVY (calculated)

0.247

Length

528 amino acids

Sequence
(BLAST)

001: MALKVLSALD TAKTQYYHFK AIIIAGMGLF TDAYDLFCIP PIMKLIGRIY YEDEPNLEKQ YETPAFVVSL LVGLALLGTV IGQLVFGRLG DQIGRRRVYG
101: LSLMLMVLSS IGCGFSICRT RNCVLGTLGF FRFMLGIGIG GDYPLSATIM SEFANKKTRG SFIAAVFSMQ GFGILVSSTV TMVVCSIFNA ASNAQYNHTP
201: EEADLVWRLI LMFGAIPAAM TYYWRMMMPE TARYTALVEQ NVLQAAKDME KYEIPPNPPS YPLFSKEFFR RHGRDLFSCA TTWFLVDVVF YSSNLFQSQI
301: YNEYLSKKED MNAYTEAFEV ARVQALIAVC STIPGYWATV SCIDRIGRVK IQMMGFLFMG LGLLAIGIPY YSTWDEGMEN EGKKFGFMLL YGLTFFFANF
401: GPNTTTFIVP AELFPARFRS TCHGISGAAG KVGAIIGSVG FLWASHNKKE KGYPKAIGMR YSLVILAGVC FMGVVVTYFF TRETKGRSLE ENEIENENED
501: GSNDHVLLRC FTNCSVQSHS SINEGAAA

Best Arabidopsis Sequence Match ( AT1G76430.1 )
(BLAST)

001: MPELSLLSAL DAARIQWYHF KAIIVAGMGL FTDAYDLFCI APIMKMISQI YYHKDSIGTA LLSTSYAIAL LGTALGQLIF GYLGDRVGRR KVYGLSLLIM
101: VFSSFGCGFS VCTTRRSCVM VSLGFFRFVL GLGIGGDYPL SATIMSEFAN KRTRGAFIAA VFSMQGLGIL MSSAVTMVVC LAFKNAGEGS SEKTNVAGLE
201: TLAPPESDIA WRLILMIGAL PAALTFYWRM LMPETARYTA LVENNVVQAA KDMQRVMSVS MISQITEDSS SELEQPPSSS SYKLFSRRFL SLHGRDLFAA
301: SANWFLVDVV FYTSNLLLSQ IFNFSNKPLN STNVYDSAFE VAKLAAIVAA CSTIPGYWFT VYFIDKIGRV KIQMMGFFLM AVVYLVAGIP YSWYWSKHEK
401: TNKGFMVLYG LIFFFSNFGP NTTTFIIPAE LFPARFRSTC HGISGAAGKF GAIVGTVGFL WATRHHEEDG FPDVKRVRIA FLILGGVCIA GMIVTYLFTR
501: ETMGRSLEEN EDEIVSTSAG SSPANELLRR QY

Arabidopsis Description

PHT1-9Putative phosphate transporter [Source:UniProtKB/TrEMBL;Acc:Q0WRM8]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.