Factsheet for VIT_16s0050g02370.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:

cytosol 1
plastid 2
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0050g02380.t01	Wine grape	plasma membrane	86.4	90.91
PGSC0003DMT400006059	Potato	plasma membrane	75.92	78.07
Solyc06g051860.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	74.45	76.56
PGSC0003DMT400006063	Potato	cytosol, endoplasmic reticulum, plasma membrane	74.26	76.37
GSMUA_Achr3P25060_001	Banana	plasma membrane	59.56	75.7
Solyc06g051850.1.1	Tomato	cytosol, plasma membrane, plastid	74.63	74.5
KRH15976	Soybean	plasma membrane	71.88	74.48
KRH18132	Soybean	plasma membrane	71.69	73.72
HORVU4Hr1G002070.1	Barley	cytosol, endoplasmic reticulum	67.83	67.09
TraesCS4B01G013200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	67.83	66.61
TraesCS4D01G010900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	67.65	66.55
TraesCS4A01G301100.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	67.46	66.25
Zm00001d011498_P001	Maize	plasma membrane	66.91	65.7
Os01t0657100-01	Rice	plasma membrane	66.91	65.59
EES03373	Sorghum	plasma membrane	66.73	65.52
VIT_07s0005g03300.t01	Wine grape	golgi, plasma membrane, vacuole	27.21	64.07
VIT_13s0067g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	60.48	61.5
VIT_07s0005g03290.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	57.17	59.24
VIT_05s0049g00920.t01	Wine grape	plasma membrane	57.72	58.36
VIT_05s0049g00940.t01	Wine grape	plasma membrane	56.8	57.65
VIT_05s0049g00930.t01	Wine grape	plasma membrane	57.17	51.66
VIT_18s0122g00780.t01	Wine grape	cytosol, peroxisome, plasma membrane	47.24	48.67

Protein Annotations

EntrezGene:100258742	wikigene:100258742	MapMan:24.2.2.6	MapMan:25.3.2.1	MapMan:26.9.4.2	ProteinID:CCB47768
ProteinID:CCB47768.1	UniProt:F6H6G6	EMBL:FN595243	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	EntrezGene:LOC100258742	wikigene:LOC100258742
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PFscan:PS50850	PANTHER:PTHR24064
PANTHER:PTHR24064:SF251	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002109D9B	ArrayExpress:VIT_16s0050g02370	EnsemblPlantsGene:VIT_16s0050g02370
EnsemblPlants:VIT_16s0050g02370.t01	RefSeq:XP_002267327	RefSeq:XP_002267327.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:+:19301911..19303838

Molecular Weight (calculated)

61116.0 Da

IEP (calculated)

7.963

GRAVY (calculated)

0.354

Length

544 amino acids

Sequence
(BLAST)

001: MSNSLAVLHA LDSARTQWYH ITAIIIAGMG FFTDAYDLFC ISTISKLLGR LYYYDPVGSP EKPGKLPHNV NNAVVGVALF GTLTGQLVFG WLGDKLGRKR
101: VYGFTLILMV VCAICSGLSF GYSPKAVIIT LCFFRFWLGF GIGGDYPLSA TIMSEYANKK TRGAFIAAVF AMQGMGIIFA GLVSMILSKL FLLKYETVSF
201: REDPVRSTQR EADFLWRIVL MLGALPALLT YYWRMKMPET GRYTALIEGN AKQAAADMGR VLEIEIQEEA DKVAEFKAAN EYSLWSREFF DRHGLHLIGT
301: MSTWFLLDIA FYSQNLTQKD IFPAMNLVNK DYQVSALREM FETSRAMFVV ALLGTFPGYW FTVFFIERIG RYIIQLVGFF MMSLFMLIIG IKYEYLRDDN
401: KWLFAVLYGL TFFFANFGPN STTFVLPAEL FPTRVRSTCH AMSAAAGKAG AMIGAFVVAT YTLDGKANEI RVAMITMACT NMLGFFCTFL VTETKGRSLE
501: EISGEDGDKF QGIRGAYDYM NLQALVAKEV AFFNAMYRIC MSDD

Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)

001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV

Arabidopsis Description

PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.