Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plasma membrane, plastid
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 96.84 95.89
Bra016446.1-P Field mustard plasma membrane 96.84 90.41
CDY31501 Canola plasma membrane 45.26 79.79
CDY29499 Canola plasma membrane, plastid 65.81 76.55
AT1G20860.2 Thale cress cytosol, mitochondrion, plasma membrane 87.94 75.94
CDY31503 Canola plasma membrane, plastid 64.82 75.75
CDX87599 Canola plasma membrane 76.48 71.67
CDY72521 Canola plastid 39.72 71.53
CDX68097 Canola plasma membrane 73.91 70.04
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 74.31 69.76
CDX88276 Canola golgi, plasma membrane 50.4 69.48
CDX88279 Canola plasma membrane 62.85 69.13
CDX87598 Canola plasma membrane 68.77 68.1
CDX85949 Canola plasma membrane 73.91 67.88
CDY31502 Canola plasma membrane 35.18 67.68
CDX88275 Canola extracellular, plasma membrane, vacuole 34.59 67.31
CDX88274 Canola plasma membrane 69.37 65.24
CDX87600 Canola plasma membrane 69.76 60.65
CDY50482 Canola extracellular, mitochondrion 6.72 59.65
PGSC0003DMT400025887 Potato cytosol, peroxisome, plasma membrane 57.51 57.17
KRH50469 Soybean golgi, mitochondrion, plasma membrane, plastid 57.51 56.95
KRG89401 Soybean golgi, mitochondrion, plasma membrane, plastid 56.92 56.92
VIT_18s0122g00780.t01 Wine grape cytosol, peroxisome, plasma membrane 57.91 55.49
CDX88277 Canola cytosol, extracellular 11.07 52.83
CDY32948 Canola mitochondrion 23.12 50.65
GSMUA_Achr3P03730_001 Banana cytosol, golgi, plasma membrane 48.02 50.31
Os06t0325200-01 Rice cytosol 53.75 49.28
EER88333 Sorghum cytosol, mitochondrion, plasma membrane, plastid 54.15 47.82
TraesCS7B01G193000.2 Wheat plasma membrane 52.96 47.52
TraesCS7A01G226600.1 Wheat plasma membrane 52.96 47.52
TraesCS7D01G227800.1 Wheat plasma membrane 52.37 46.99
Os06t0324800-01 Rice mitochondrion, plasma membrane 53.75 46.74
HORVU0Hr1G020720.1 Barley peroxisome, plasma membrane, plastid 51.98 46.55
CDY14877 Canola vacuole 10.47 46.49
CDY40416 Canola plasma membrane 23.52 45.25
CDY71773 Canola plasma membrane 29.45 45.15
CDY32949 Canola plasma membrane 39.53 44.44
CDY60903 Canola plasma membrane 41.9 43.44
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 41.9 43.35
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 41.9 43.35
CDY32947 Canola extracellular, golgi, plastid 10.28 43.33
CDY22354 Canola golgi, plasma membrane, vacuole 39.72 43.32
CDY52378 Canola extracellular, plasma membrane 38.93 43.11
CDY32951 Canola mitochondrion 12.65 42.95
CDY07686 Canola plasma membrane 44.27 42.91
CDY14880 Canola extracellular 7.11 42.86
CDY43612 Canola peroxisome, plasma membrane, vacuole 42.09 42.86
CDY32943 Canola plasma membrane 37.15 42.82
CDY14881 Canola plasma membrane 39.92 42.71
CDX96886 Canola plasma membrane 39.92 42.71
CDX96885 Canola plasma membrane 39.92 42.71
CDY62546 Canola plasma membrane 43.68 42.42
CDY13225 Canola plasma membrane 42.89 42.14
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 36.96 42.12
CDY47815 Canola plasma membrane 27.67 41.79
CDX91502 Canola plasma membrane 41.7 41.62
CDX91503 Canola plasma membrane 43.68 41.46
CDX95146 Canola endoplasmic reticulum, plasma membrane 36.36 41.44
CDY18359 Canola plasma membrane 42.09 41.36
CDX74874 Canola plasma membrane 43.48 41.28
CDX73457 Canola plasma membrane 43.28 41.24
CDY14875 Canola mitochondrion 13.44 41.21
CDX93291 Canola plasma membrane 41.9 41.16
CDX78256 Canola plasma membrane 43.08 41.05
CDX74877 Canola plasma membrane 41.7 40.97
CDY14883 Canola plasma membrane, vacuole 43.28 40.93
CDX76138 Canola plasma membrane 43.28 40.78
CDX96881 Canola mitochondrion 13.24 40.61
CDY22352 Canola plasma membrane 42.69 40.37
CDX96883 Canola cytosol, peroxisome, plasma membrane 19.76 40.16
CDY43610 Canola mitochondrion 12.65 39.75
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 42.89 39.74
CDY43616 Canola plasma membrane 32.41 39.61
CDX96889 Canola plasma membrane, vacuole 39.33 39.56
CDY43613 Canola cytosol, extracellular, golgi 11.07 38.89
CDX74875 Canola plasma membrane 41.7 38.64
CDX84703 Canola plasma membrane 21.54 38.52
CDY50481 Canola plasma membrane 16.4 38.25
CDX96884 Canola cytosol, plasma membrane, vacuole 12.45 37.95
CDY60902 Canola plasma membrane 43.28 37.69
CDY14879 Canola endoplasmic reticulum, golgi 9.68 37.4
CDX96882 Canola plasma membrane 14.23 37.31
CDY14876 Canola plasma membrane 14.23 37.31
GSMUA_Achr4P09810_001 Banana peroxisome, plasma membrane, plastid 29.64 36.41
CDY32942 Canola plasma membrane 16.8 35.12
CDY32950 Canola cytosol 6.72 35.05
CDY14878 Canola cytosol 6.32 34.78
CDY32067 Canola golgi, plasma membrane, vacuole 5.34 24.11
CDY40417 Canola endoplasmic reticulum, extracellular 1.58 16.67
Protein Annotations
MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078H835UniProt:A0A078H835EnsemblPlants:CDY33652ProteinID:CDY33652
ProteinID:CDY33652.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00055011001
InterPro:IPR020846InterPro:MFSInterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083
PFAM:PF07690PFscan:PS50850PANTHER:PTHR24064PANTHER:PTHR24064:SF210SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EC7802SEG:seg::::
Description
BnaC08g19520DBnaC08g19520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H835]
Coordinates
chrLK032319:-:229671..232857
Molecular Weight (calculated)
55861.7 Da
IEP (calculated)
6.054
GRAVY (calculated)
0.280
Length
506 amino acids
Sequence
(BLAST)
001: MPIKVLSSLD AARIQWYHFK AIIVAGMGLF TDAYDLFCIA PVMKMISHVY YHGDSINTAV LSTSYAIALL GTATGQLVFG YLGDRVGRRR VYGLCLVIMI
101: ISSFGCGFSV CTTRRSCVMR TRGAFIAAVF SMQGLGILVS SAVTMAVCVA FKRGGGGGSL DEEEAPPEAD VAWRLILMIG ALPAALTFYW RMLMPETARY
201: TALVENNIVQ AAKDMERVMS ITDDISDETT TETPPPPPPP LPPSYTLFSL RFLRLHGRDL FAASVNWFLV DVVFYTSNLL LSQIFSHYSD KPSSSTAENV
301: YDAAFRVAEL GAIIAACSTI PGYWFTVYFI DKIGRVKIQM MGFFFMAVVY LVAGIPYTWY WSKHEQTKKG FMVLYGLVFF FSNFGPNTTT FIIPAELFPA
401: RFRSTCHGIS GAAGKLGAIV GTVGFLWATE KADDGDNMNR MRAAFLILGG VCIAGIFVTY FFTKETMGRS LEENEHQQEQ VNNDESEDEP HIVDGQSSES
501: TLLQTQ
Best Arabidopsis Sequence Match ( AT1G20860.2 )
(BLAST)
001: MKMTKRLINR YKDPCSVSLI MNSKFRYNKP KGKKQKKKKK ALDSESQIKK PTMPIKVLSS LDVARTQWYH FKAIIVAGMG LFTDAYDLFC IAPVMKMISH
101: VYYNGDSINT AVLSTSYAIA LLGTATGQLV FGYLGDRVGR RRVYGLCLII MILSSFGCGF SVCTTRRSCV MVSLGFFRFF LGLGIGGDYP LSATIMSEFA
201: NKRTRGAFIA AVFSMQGLGI LVSSAVTMAV CVAFKRSGGG LEVDAAAPTE ADLAWRLILM IGALPAALTF YWRMLMPETA RYTALVENNI VQAAKDMQRV
301: MSRSHISDEA TTDPPPPPPP PSYKLFSRCF FRLHGRDLFA ASFNWFLVDI VFYTSNLLLS HIFSHYSKKP STAENVYDAA FEVAELGAII AACSTIPGYW
401: FTVYFIDKIG RVKIQIMGFF FMAVIYLVAG IPYSWYWSKH EHNNKGFMVL YGLVFFFCNF GPNTTTFIIP AEHFPARFRS TCHGISGAAG KLGAIVGTVG
501: FLWATKKMES DDKNQIYPEV NRMRIAFLIL GGVCIAGILV TYFFTKETMG RSLEENEHDQ DNNAESEDEP QIVDGQSSVS TLLQTR
Arabidopsis Description
PHT1;8phosphate transporter 1;8 [Source:TAIR;Acc:AT1G20860]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.